RNA–Protein interactions for RNA: ENST00000583352.5

CDK5RAP3-227, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 901 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-227ENST00000583352 U2AF1L5P0DN76 240 aaPredicted RBP12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 U2AF1Q01081 240 aaKnown RBP eCLIP12.91□□□□□ -0.347e-10■□□□□ 10.2
CDK5RAP3-227ENST00000583352 ERFEQ4G0M1 354 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 SOGA3Q5TF21 947 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 STYK1Q6J9G0 422 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 TAOK3Q9H2K8 898 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 USP16Q9Y5T5 823 aa12.91□□□□□ -0.34
CDK5RAP3-227ENST00000583352 LTBP3Q9NS15 1303 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 SNRPA1P09661 255 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 CLEC4GQ6UXB4 293 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 MASTLQ96GX5 879 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 ZNF652Q9Y2D9 606 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 FER1L6Q2WGJ9 1857 aa12.9□□□□□ -0.34
CDK5RAP3-227ENST00000583352 DICER1Q9UPY3 1922 aaKnown RBP12.9□□□□□ -0.35
CDK5RAP3-227ENST00000583352 SRGNP10124 158 aa12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 PPP2R1AP30153 589 aa12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 PIP4K2AP48426 406 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 PRPF40BQ6NWY9 871 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 MCM10Q7L590 875 aa12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NBPF5PQ86XG9 351 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-227ENST00000583352 PRAMEF22A3QJZ6 481 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 POTECB2RU33 542 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 ANP32CO43423 234 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 HTATSF1O43719 755 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CACNA1SQ13698 1873 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 SLX4Q8IY92 1834 aa12.88□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CCER2I3L3R5 266 aa12.87□□□□□ -0.35
CDK5RAP3-227ENST00000583352 RGL2O15211 777 aa12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NPR1P16066 1061 aa12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 DCTN1Q14203 1278 aa12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 TPTE2Q6XPS3 522 aa12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NIP7Q9Y221 180 aaKnown RBP eCLIP12.86□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NBPF26B4DH59 902 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 DDNO94850 711 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NEFMP07197 916 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 TAF7Q15545 349 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CCDC93Q567U6 631 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 COL13A1Q5TAT6 717 aaPredicted RBP12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CHADLQ6NUI6 762 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NBPF10Q6P3W6 841 aaKnown RBP12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 NBPF15Q8N660 670 aa12.85□□□□□ -0.35
CDK5RAP3-227ENST00000583352 CEP350Q5VT06 3117 aa12.84□□□□□ -0.35
CDK5RAP3-227ENST00000583352 KLRG2A4D1S0 409 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 IQCA1LA6NCM1 817 aa12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 FAM177BA6PVY3 158 aa12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 GTF2E1P29083 439 aaPredicted RBP12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 PNISRQ8TF01 805 aaKnown RBP12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 C7orf43Q8WVR3 580 aa12.83□□□□□ -0.36
CDK5RAP3-227ENST00000583352 LAMB4A4D0S4 1761 aa12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 HSPA1AP0DMV8 641 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 HSPA1BP0DMV9 641 aaKnown RBP12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 RTKN2Q8IZC4 609 aa12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 CREBZFQ9NS37 354 aa12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 MIS18AQ9NYP9 233 aa12.82□□□□□ -0.36
CDK5RAP3-227ENST00000583352 POTEIP0CG38 1075 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 POTEJP0CG39 1038 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 ALDH1B1P30837 517 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 HLFQ16534 295 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 TNS4Q8IZW8 715 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 L3MBTL3Q96JM7 780 aaPredicted RBP12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 SCN4AP35499 1836 aa12.81□□□□□ -0.36
CDK5RAP3-227ENST00000583352 LDHDQ86WU2 507 aa12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 NGEFQ8N5V2 710 aa12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 NYXQ9GZU5 481 aa12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 TAF1DQ9H5J8 278 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 ZNF277Q9NRM2 450 aaPredicted RBP12.8□□□□□ -0.36
CDK5RAP3-227ENST00000583352 KDM3BQ7LBC6 1761 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 ERVV-1B6SEH8 477 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 OLFM4Q6UX06 510 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 KIF6Q6ZMV9 814 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 PRKRIP1Q9H875 184 aaPredicted RBP12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 MKRN1Q9UHC7 482 aaKnown RBP12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 DLG5Q8TDM6 1919 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 MAP3K15Q6ZN16 1313 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 ZNF541Q9H0D2 1346 aa12.79□□□□□ -0.36
CDK5RAP3-227ENST00000583352 CENPBP07199 599 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 IARSP41252 1262 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 EIF4A1P60842 406 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 NFE2L2Q16236 605 aa12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 EAPPQ56P03 285 aaPredicted RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 SYNE4Q8N205 404 aa12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 YTHDC1Q96MU7 727 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 HACL1Q9UJ83 578 aa12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 RRP7AQ9Y3A4 280 aaKnown RBP12.78□□□□□ -0.36
CDK5RAP3-227ENST00000583352 NUP98P52948 1817 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CAPN15O75808 1086 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CRY2Q49AN0 593 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CC2D2BQ6DHV5 1058 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 NUTM1Q86Y26 1132 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 RPGRQ92834 1020 aaKnown RBP12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PLEKHF1Q96S99 279 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 CLEC11AQ9Y240 323 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 PASKQ96RG2 1323 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 MAPK8IP3Q9UPT6 1336 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 ABCC12Q96J65 1359 aa12.77□□□□□ -0.37
CDK5RAP3-227ENST00000583352 FZD9O00144 591 aa12.76□□□□□ -0.37
CDK5RAP3-227ENST00000583352 MYL6BP14649 208 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms