RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 WDR43Q15061 677 aaKnown RBP eCLIP23.56■■□□□ 1.36
SNX11-212ENST00000583320 MTHFSDQ2M296 383 aaKnown RBP23.56■■□□□ 1.36
SNX11-212ENST00000583320 COL3A1P02461 1466 aaPredicted RBP23.56■■□□□ 1.36
SNX11-212ENST00000583320 SCN4AP35499 1836 aa23.55■■□□□ 1.36
SNX11-212ENST00000583320 CENPBP07199 599 aaPredicted RBP23.55■■□□□ 1.36
SNX11-212ENST00000583320 CTCFP49711 727 aaPredicted RBP23.55■■□□□ 1.36
SNX11-212ENST00000583320 PRPF40BQ6NWY9 871 aaKnown RBP23.55■■□□□ 1.36
SNX11-212ENST00000583320 TBC1D2BQ9UPU7 963 aa23.55■■□□□ 1.36
SNX11-212ENST00000583320 ADAMTSL1Q8N6G6 1762 aa23.55■■□□□ 1.36
SNX11-212ENST00000583320 LDHDQ86WU2 507 aa23.54■■□□□ 1.36
SNX11-212ENST00000583320 TAF1DQ9H5J8 278 aaPredicted RBP23.54■■□□□ 1.36
SNX11-212ENST00000583320 ITGBL1O95965 494 aaPredicted RBP23.53■■□□□ 1.36
SNX11-212ENST00000583320 LBX1P52954 281 aa23.53■■□□□ 1.36
SNX11-212ENST00000583320 L3MBTL3Q96JM7 780 aaPredicted RBP23.53■■□□□ 1.36
SNX11-212ENST00000583320 PDZRN3Q9UPQ7 1066 aa23.53■■□□□ 1.36
SNX11-212ENST00000583320 ZNF330Q9Y3S2 320 aaPredicted RBP23.53■■□□□ 1.36
SNX11-212ENST00000583320 BCORQ6W2J9 1755 aa23.52■■□□□ 1.36
SNX11-212ENST00000583320 A0A087WZG4 1122 aa23.52■■□□□ 1.36
SNX11-212ENST00000583320 STARD3NLO95772 234 aa23.52■■□□□ 1.36
SNX11-212ENST00000583320 ZNF496Q96IT1 587 aaPredicted RBP23.52■■□□□ 1.36
SNX11-212ENST00000583320 WBP1LQ9NX94 342 aa23.52■■□□□ 1.36
SNX11-212ENST00000583320 ZNF541Q9H0D2 1346 aa23.52■■□□□ 1.36
SNX11-212ENST00000583320 SRGNP10124 158 aa23.51■■□□□ 1.35
SNX11-212ENST00000583320 STYK1Q6J9G0 422 aa23.51■■□□□ 1.35
SNX11-212ENST00000583320 AIDAQ96BJ3 306 aa23.51■■□□□ 1.35
SNX11-212ENST00000583320 SIPA1L3O60292 1781 aaPredicted RBP23.5■■□□□ 1.35
SNX11-212ENST00000583320 IQCA1LA6NCM1 817 aa23.5■■□□□ 1.35
SNX11-212ENST00000583320 TMEM88BA6NKF7 163 aa23.5■■□□□ 1.35
SNX11-212ENST00000583320 HNRNPUQ00839 825 aaKnown RBP eCLIP23.5■■□□□ 1.35
SNX11-212ENST00000583320 CNBD1Q8NA66 436 aa23.5■■□□□ 1.35
SNX11-212ENST00000583320 ADAMTS8Q9UP79 889 aa23.5■■□□□ 1.35
SNX11-212ENST00000583320 NUDCQ9Y266 331 aa23.5■■□□□ 1.35
SNX11-212ENST00000583320 HEG1Q9ULI3 1381 aa23.5■■□□□ 1.35
SNX11-212ENST00000583320 CAMTA2O94983 1202 aa23.49■■□□□ 1.35
SNX11-212ENST00000583320 C7orf43Q8WVR3 580 aa23.49■■□□□ 1.35
SNX11-212ENST00000583320 CNKSR1Q969H4 720 aa23.49■■□□□ 1.35
SNX11-212ENST00000583320 HSPA8P11142 646 aaKnown RBP23.48■■□□□ 1.35
SNX11-212ENST00000583320 EAPPQ56P03 285 aaPredicted RBP23.48■■□□□ 1.35
SNX11-212ENST00000583320 TTC5Q8N0Z6 440 aa23.48■■□□□ 1.35
SNX11-212ENST00000583320 DIAPH1O60610 1272 aaKnown RBP23.47■■□□□ 1.35
SNX11-212ENST00000583320 OLFM4Q6UX06 510 aa23.47■■□□□ 1.35
SNX11-212ENST00000583320 MASTLQ96GX5 879 aa23.47■■□□□ 1.35
SNX11-212ENST00000583320 ABHD8Q96I13 439 aa23.47■■□□□ 1.35
SNX11-212ENST00000583320 A1BGP04217 495 aa23.46■■□□□ 1.35
SNX11-212ENST00000583320 IL6STP40189 918 aaPredicted RBP23.46■■□□□ 1.35
SNX11-212ENST00000583320 FAM161AQ3B820 660 aa23.46■■□□□ 1.35
SNX11-212ENST00000583320 ZBED9Q6R2W3 1325 aa23.46■■□□□ 1.35
SNX11-212ENST00000583320 SETDB2Q96T68 719 aa23.46■■□□□ 1.35
SNX11-212ENST00000583320 ZNF790Q6PG37 636 aa23.45■■□□□ 1.34
SNX11-212ENST00000583320 ZNF277Q9NRM2 450 aaPredicted RBP23.45■■□□□ 1.34
SNX11-212ENST00000583320 RASSF10A6NK89 507 aa23.44■■□□□ 1.34
SNX11-212ENST00000583320 ST5P78524 1137 aa23.44■■□□□ 1.34
SNX11-212ENST00000583320 SOGA3Q5TF21 947 aa23.44■■□□□ 1.34
SNX11-212ENST00000583320 IL17REQ8NFR9 667 aa23.44■■□□□ 1.34
SNX11-212ENST00000583320 NPHP1O15259 732 aa23.43■■□□□ 1.34
SNX11-212ENST00000583320 CCDC93Q567U6 631 aa23.43■■□□□ 1.34
SNX11-212ENST00000583320 MAP1SQ66K74 1059 aaPredicted RBP23.43■■□□□ 1.34
SNX11-212ENST00000583320 HACL1Q9UJ83 578 aa23.43■■□□□ 1.34
SNX11-212ENST00000583320 RNF123Q5XPI4 1314 aa23.42■■□□□ 1.34
SNX11-212ENST00000583320 THSD7BQ9C0I4 1608 aa23.42■■□□□ 1.34
SNX11-212ENST00000583320 EPHX2P34913 555 aa23.42■■□□□ 1.34
SNX11-212ENST00000583320 PIP4K2AP48426 406 aaPredicted RBP23.42■■□□□ 1.34
SNX11-212ENST00000583320 CLEC11AQ9Y240 323 aa23.42■■□□□ 1.34
SNX11-212ENST00000583320 FKBP4Q02790 459 aaKnown RBP eCLIP23.41■■□□□ 1.34
SNX11-212ENST00000583320 KCNQ3O43525 872 aa23.4■■□□□ 1.34
SNX11-212ENST00000583320 DZIP3Q86Y13 1208 aaKnown RBP23.4■■□□□ 1.34
SNX11-212ENST00000583320 NGEFQ8N5V2 710 aa23.4■■□□□ 1.34
SNX11-212ENST00000583320 LTBP1Q14766 1721 aa23.39■■□□□ 1.34
SNX11-212ENST00000583320 WDR33Q9C0J8 1336 aaKnown RBP23.39■■□□□ 1.34
SNX11-212ENST00000583320 COL4A5P29400 1685 aa23.39■■□□□ 1.34
SNX11-212ENST00000583320 TEFQ10587 303 aa23.39■■□□□ 1.33
SNX11-212ENST00000583320 DEFB115Q30KQ5 88 aa23.39■■□□□ 1.33
SNX11-212ENST00000583320 CNTROBQ8N137 903 aa23.39■■□□□ 1.33
SNX11-212ENST00000583320 TEX13AQ9BXU3 409 aaPredicted RBP23.39■■□□□ 1.33
SNX11-212ENST00000583320 PNNQ9H307 717 aaKnown RBP23.39■■□□□ 1.33
SNX11-212ENST00000583320 U2AF1L5P0DN76 240 aaPredicted RBP23.38■■□□□ 1.33
SNX11-212ENST00000583320 U2AF1Q01081 240 aaKnown RBP eCLIP23.38■■□□□ 1.33
SNX11-212ENST00000583320 SNED1Q8TER0 1413 aa23.37■■□□□ 1.33
SNX11-212ENST00000583320 NPR1P16066 1061 aa23.37■■□□□ 1.33
SNX11-212ENST00000583320 FMR1Q06787 632 aaKnown RBP eCLIP23.37■■□□□ 1.33
SNX11-212ENST00000583320 NBPF5PQ86XG9 351 aaPredicted RBP23.37■■□□□ 1.33
SNX11-212ENST00000583320 FMNL2Q96PY5 1086 aa23.37■■□□□ 1.33
SNX11-212ENST00000583320 PRAMEF22A3QJZ6 481 aa23.36■■□□□ 1.33
SNX11-212ENST00000583320 KLRG2A4D1S0 409 aaPredicted RBP23.36■■□□□ 1.33
SNX11-212ENST00000583320 NCBP3Q53F19 620 aaKnown RBP23.36■■□□□ 1.33
SNX11-212ENST00000583320 RUNDC1Q96C34 613 aa23.36■■□□□ 1.33
SNX11-212ENST00000583320 GNAT3A8MTJ3 354 aa23.35■■□□□ 1.33
SNX11-212ENST00000583320 FZD9O00144 591 aa23.35■■□□□ 1.33
SNX11-212ENST00000583320 U2SURPO15042 1029 aaKnown RBP23.35■■□□□ 1.33
SNX11-212ENST00000583320 ABT1Q9ULW3 272 aaKnown RBP23.35■■□□□ 1.33
SNX11-212ENST00000583320 USP16Q9Y5T5 823 aa23.35■■□□□ 1.33
SNX11-212ENST00000583320 PNMA8AQ86V59 439 aaPredicted RBP23.34■■□□□ 1.33
SNX11-212ENST00000583320 CEMIPQ8WUJ3 1361 aa23.34■■□□□ 1.33
SNX11-212ENST00000583320 IARSP41252 1262 aaKnown RBP23.33■■□□□ 1.33
SNX11-212ENST00000583320 MAP2K1Q02750 393 aaPredicted RBP23.33■■□□□ 1.33
SNX11-212ENST00000583320 NPM2Q86SE8 214 aaKnown RBP23.32■■□□□ 1.32
SNX11-212ENST00000583320 SYNE4Q8N205 404 aa23.32■■□□□ 1.32
SNX11-212ENST00000583320 DDX21Q9NR30 783 aaKnown RBP eCLIP23.32■■□□□ 1.32
SNX11-212ENST00000583320 SLC51AQ86UW1 340 aa23.31■■□□□ 1.32
SNX11-212ENST00000583320 GPC2Q8N158 579 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms