RNA–Protein interactions for RNA: ENST00000583282.5

GGA3-216, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 4

Gene GGA3, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-216ENST00000583282 SMC4Q9NTJ3 1288 aa17.98■□□□□ 0.47
GGA3-216ENST00000583282 HYPKQ9NX55 129 aa17.98■□□□□ 0.47
GGA3-216ENST00000583282 ATF5Q9Y2D1 282 aaPredicted RBP17.98■□□□□ 0.47
GGA3-216ENST00000583282 MAP3K15Q6ZN16 1313 aa17.98■□□□□ 0.47
GGA3-216ENST00000583282 SLC4A2P04920 1241 aa17.97■□□□□ 0.47
GGA3-216ENST00000583282 FKBP8Q14318 412 aa17.97■□□□□ 0.47
GGA3-216ENST00000583282 G2E3Q7L622 706 aa17.97■□□□□ 0.47
GGA3-216ENST00000583282 MTFR1LQ9H019 292 aa17.97■□□□□ 0.47
GGA3-216ENST00000583282 AFDNP55196 1824 aaKnown RBP17.97■□□□□ 0.47
GGA3-216ENST00000583282 LRP5O75197 1615 aa17.97■□□□□ 0.47
GGA3-216ENST00000583282 SSH1Q8WYL5 1049 aa17.96■□□□□ 0.47
GGA3-216ENST00000583282 BCL2L12Q9HB09 334 aa17.96■□□□□ 0.47
GGA3-216ENST00000583282 CT47B1P0C2W7 299 aaPredicted RBP17.95■□□□□ 0.46
GGA3-216ENST00000583282 FLIIQ13045 1269 aa17.95■□□□□ 0.46
GGA3-216ENST00000583282 HLFQ16534 295 aa17.95■□□□□ 0.46
GGA3-216ENST00000583282 BICDL1Q6ZP65 573 aa17.95■□□□□ 0.46
GGA3-216ENST00000583282 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
GGA3-216ENST00000583282 SLC16A10Q8TF71 515 aa17.94■□□□□ 0.46
GGA3-216ENST00000583282 FKBP5Q13451 457 aaPredicted RBP17.93■□□□□ 0.46
GGA3-216ENST00000583282 TBC1D9BQ66K14 1250 aa17.93■□□□□ 0.46
GGA3-216ENST00000583282 MRPL50Q8N5N7 158 aaKnown RBP17.93■□□□□ 0.46
GGA3-216ENST00000583282 ADCY9O60503 1353 aa17.92■□□□□ 0.46
GGA3-216ENST00000583282 ATP10DQ9P241 1426 aa17.92■□□□□ 0.46
GGA3-216ENST00000583282 MMP10P09238 476 aa17.92■□□□□ 0.46
GGA3-216ENST00000583282 GPTP24298 496 aa17.92■□□□□ 0.46
GGA3-216ENST00000583282 RARSP54136 660 aaKnown RBP17.92■□□□□ 0.46
GGA3-216ENST00000583282 ALDH1L2Q3SY69 923 aa17.92■□□□□ 0.46
GGA3-216ENST00000583282 RIC3Q7Z5B4 369 aa17.92■□□□□ 0.46
GGA3-216ENST00000583282 ZNF428Q96B54 188 aa17.92■□□□□ 0.46
GGA3-216ENST00000583282 SPON1Q9HCB6 807 aa17.92■□□□□ 0.46
GGA3-216ENST00000583282 N4BP2Q86UW6 1770 aaPredicted RBP17.91■□□□□ 0.46
GGA3-216ENST00000583282 DDX58O95786 925 aaKnown RBP17.91■□□□□ 0.46
GGA3-216ENST00000583282 POLD1P28340 1107 aa17.91■□□□□ 0.46
GGA3-216ENST00000583282 NFIXQ14938 502 aa17.91■□□□□ 0.46
GGA3-216ENST00000583282 PLBD2Q8NHP8 589 aa17.91■□□□□ 0.46
GGA3-216ENST00000583282 NRXN2Q9P2S2 1712 aa17.91■□□□□ 0.46
GGA3-216ENST00000583282 FAM177BA6PVY3 158 aa17.9■□□□□ 0.46
GGA3-216ENST00000583282 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
GGA3-216ENST00000583282 DDR1Q08345 913 aa17.9■□□□□ 0.46
GGA3-216ENST00000583282 ANKRD13DQ6ZTN6 518 aa17.9■□□□□ 0.46
GGA3-216ENST00000583282 NLGN1Q8N2Q7 840 aa17.9■□□□□ 0.46
GGA3-216ENST00000583282 NIP7Q9Y221 180 aaKnown RBP eCLIP17.9■□□□□ 0.46
GGA3-216ENST00000583282 MAP3K2Q9Y2U5 619 aa17.9■□□□□ 0.46
GGA3-216ENST00000583282 CARMIL3Q8ND23 1372 aa17.9■□□□□ 0.46
GGA3-216ENST00000583282 BCAR3O75815 825 aa17.89■□□□□ 0.45
GGA3-216ENST00000583282 PTGER2P43116 358 aa17.89■□□□□ 0.45
GGA3-216ENST00000583282 GIGYF2Q6Y7W6 1299 aaKnown RBP17.89■□□□□ 0.45
GGA3-216ENST00000583282 KLHL34Q8N239 644 aa17.89■□□□□ 0.45
GGA3-216ENST00000583282 UBN2Q6ZU65 1347 aa17.89■□□□□ 0.45
GGA3-216ENST00000583282 KIF16BQ96L93 1317 aa17.89■□□□□ 0.45
GGA3-216ENST00000583282 PI4KAP2A4QPH2 592 aa17.88■□□□□ 0.45
GGA3-216ENST00000583282 F6X3S4 739 aa17.88■□□□□ 0.45
GGA3-216ENST00000583282 PI4KAP1Q8N8J0 262 aa17.88■□□□□ 0.45
GGA3-216ENST00000583282 MYD88Q99836 296 aa17.88■□□□□ 0.45
GGA3-216ENST00000583282 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
GGA3-216ENST00000583282 TNRC6CQ9HCJ0 1690 aaKnown RBP17.87■□□□□ 0.45
GGA3-216ENST00000583282 ATP5J2-PTCD1G3V325 749 aa17.87■□□□□ 0.45
GGA3-216ENST00000583282 POLRMTO00411 1230 aaKnown RBP17.87■□□□□ 0.45
GGA3-216ENST00000583282 NPHP1O15259 732 aa17.87■□□□□ 0.45
GGA3-216ENST00000583282 CLEC4GQ6UXB4 293 aa17.87■□□□□ 0.45
GGA3-216ENST00000583282 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
GGA3-216ENST00000583282 FRAT1Q92837 279 aaPredicted RBP17.87■□□□□ 0.45
GGA3-216ENST00000583282 SGIP1Q9BQI5 828 aa17.87■□□□□ 0.45
GGA3-216ENST00000583282 HSP90AB3PQ58FF7 597 aa17.86■□□□□ 0.45
GGA3-216ENST00000583282 DNAAF4Q8WXU2 420 aa17.86■□□□□ 0.45
GGA3-216ENST00000583282 SETDB2Q96T68 719 aa17.86■□□□□ 0.45
GGA3-216ENST00000583282 PPP1R1BQ9UD71 204 aaPredicted RBP17.86■□□□□ 0.45
GGA3-216ENST00000583282 RCAN3Q9UKA8 241 aa17.86■□□□□ 0.45
GGA3-216ENST00000583282 NOB1Q9ULX3 412 aaKnown RBP17.86■□□□□ 0.45
GGA3-216ENST00000583282 PTPRCP08575 1304 aa17.86■□□□□ 0.45
GGA3-216ENST00000583282 PXDNLA1KZ92 1463 aa17.86■□□□□ 0.45
GGA3-216ENST00000583282 LAMB2P55268 1798 aa17.86■□□□□ 0.45
GGA3-216ENST00000583282 ANKRD31Q8N7Z5 1873 aa17.86■□□□□ 0.45
GGA3-216ENST00000583282 COL11A2P13942 1736 aaPredicted RBP17.85■□□□□ 0.45
GGA3-216ENST00000583282 SLC4A10Q6U841 1118 aa17.85■□□□□ 0.45
GGA3-216ENST00000583282 C10orf71Q711Q0 1435 aa17.85■□□□□ 0.45
GGA3-216ENST00000583282 CCDC24Q8N4L8 307 aa17.85■□□□□ 0.45
GGA3-216ENST00000583282 KIF13BQ9NQT8 1826 aa17.85■□□□□ 0.45
GGA3-216ENST00000583282 ABCC12Q96J65 1359 aa17.84■□□□□ 0.45
GGA3-216ENST00000583282 RGL2O15211 777 aa17.84■□□□□ 0.45
GGA3-216ENST00000583282 SERPINB2P05120 415 aa17.84■□□□□ 0.45
GGA3-216ENST00000583282 TM4SF1P30408 202 aa17.84■□□□□ 0.45
GGA3-216ENST00000583282 TCIRG1Q13488 830 aa17.84■□□□□ 0.45
GGA3-216ENST00000583282 NBPF5PQ86XG9 351 aaPredicted RBP17.84■□□□□ 0.45
GGA3-216ENST00000583282 METTL22Q9BUU2 404 aaPredicted RBP17.84■□□□□ 0.45
GGA3-216ENST00000583282 NEXNQ0ZGT2 675 aa17.83■□□□□ 0.44
GGA3-216ENST00000583282 ZNF34Q8IZ26 560 aa17.83■□□□□ 0.44
GGA3-216ENST00000583282 CNBD1Q8NA66 436 aa17.83■□□□□ 0.44
GGA3-216ENST00000583282 TNNQ9UQP3 1299 aa17.83■□□□□ 0.44
GGA3-216ENST00000583282 DDX60Q8IY21 1712 aaKnown RBP17.83■□□□□ 0.44
GGA3-216ENST00000583282 KIAA1551Q9HCM1 1747 aa17.83■□□□□ 0.44
GGA3-216ENST00000583282 CWF19L2Q2TBE0 894 aaKnown RBP17.82■□□□□ 0.44
GGA3-216ENST00000583282 SUSD4Q5VX71 490 aa17.82■□□□□ 0.44
GGA3-216ENST00000583282 NLRP10Q86W26 655 aa17.82■□□□□ 0.44
GGA3-216ENST00000583282 NUTM1Q86Y26 1132 aa17.82■□□□□ 0.44
GGA3-216ENST00000583282 ISCA1Q9BUE6 129 aa17.82■□□□□ 0.44
GGA3-216ENST00000583282 IBTKQ9P2D0 1353 aaPredicted RBP17.81■□□□□ 0.44
GGA3-216ENST00000583282 BRPF1P55201 1214 aaPredicted RBP17.81■□□□□ 0.44
GGA3-216ENST00000583282 PARP10Q53GL7 1025 aa17.81■□□□□ 0.44
GGA3-216ENST00000583282 PRR5LQ6MZQ0 368 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms