RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 DPY19L2Q6NUT2 758 aa21.73■■□□□ 1.07
SREBF1-221ENST00000583080 PRPF40BQ6NWY9 871 aaKnown RBP21.73■■□□□ 1.07
SREBF1-221ENST00000583080 SETDB2Q96T68 719 aa21.73■■□□□ 1.07
SREBF1-221ENST00000583080 BTBD11A6QL63 1104 aa21.72■■□□□ 1.07
SREBF1-221ENST00000583080 NPHP1O15259 732 aa21.72■■□□□ 1.07
SREBF1-221ENST00000583080 POTEIP0CG38 1075 aa21.72■■□□□ 1.07
SREBF1-221ENST00000583080 POTEJP0CG39 1038 aa21.72■■□□□ 1.07
SREBF1-221ENST00000583080 DZIP3Q86Y13 1208 aaKnown RBP21.72■■□□□ 1.07
SREBF1-221ENST00000583080 TNS4Q8IZW8 715 aa21.72■■□□□ 1.07
SREBF1-221ENST00000583080 RSPH6AQ9H0K4 717 aa21.72■■□□□ 1.07
SREBF1-221ENST00000583080 SRGNP10124 158 aa21.71■■□□□ 1.07
SREBF1-221ENST00000583080 ST5P78524 1137 aa21.71■■□□□ 1.07
SREBF1-221ENST00000583080 STYK1Q6J9G0 422 aa21.71■■□□□ 1.07
SREBF1-221ENST00000583080 CNKSR1Q969H4 720 aa21.71■■□□□ 1.07
SREBF1-221ENST00000583080 USP16Q9Y5T5 823 aa21.71■■□□□ 1.07
SREBF1-221ENST00000583080 DDNO94850 711 aaPredicted RBP21.7■■□□□ 1.06
SREBF1-221ENST00000583080 NPM2Q86SE8 214 aaKnown RBP21.7■■□□□ 1.06
SREBF1-221ENST00000583080 MASTLQ96GX5 879 aa21.69■■□□□ 1.06
SREBF1-221ENST00000583080 CHADLQ6NUI6 762 aa21.67■■□□□ 1.06
SREBF1-221ENST00000583080 NBPF5PQ86XG9 351 aaPredicted RBP21.67■■□□□ 1.06
SREBF1-221ENST00000583080 MCM10Q7L590 875 aa21.66■■□□□ 1.06
SREBF1-221ENST00000583080 SOGA3Q5TF21 947 aa21.65■■□□□ 1.06
SREBF1-221ENST00000583080 C7orf43Q8WVR3 580 aa21.65■■□□□ 1.06
SREBF1-221ENST00000583080 NBPF26B4DH59 902 aa21.64■■□□□ 1.05
SREBF1-221ENST00000583080 NBPF10Q6P3W6 841 aaKnown RBP21.64■■□□□ 1.05
SREBF1-221ENST00000583080 OLFM4Q6UX06 510 aa21.64■■□□□ 1.05
SREBF1-221ENST00000583080 NBPF15Q8N660 670 aa21.64■■□□□ 1.05
SREBF1-221ENST00000583080 CREBZFQ9NS37 354 aa21.64■■□□□ 1.05
SREBF1-221ENST00000583080 MKRN1Q9UHC7 482 aaKnown RBP21.64■■□□□ 1.05
SREBF1-221ENST00000583080 SNRPA1P09661 255 aaKnown RBP21.63■■□□□ 1.05
SREBF1-221ENST00000583080 DCTN1Q14203 1278 aa21.63■■□□□ 1.05
SREBF1-221ENST00000583080 CCDC93Q567U6 631 aa21.63■■□□□ 1.05
SREBF1-221ENST00000583080 CLEC4GQ6UXB4 293 aa21.63■■□□□ 1.05
SREBF1-221ENST00000583080 CFAP53Q96M91 514 aa21.63■■□□□ 1.05
SREBF1-221ENST00000583080 ZNF541Q9H0D2 1346 aa21.62■■□□□ 1.05
SREBF1-221ENST00000583080 ZNF652Q9Y2D9 606 aa21.62■■□□□ 1.05
SREBF1-221ENST00000583080 SCN4AP35499 1836 aa21.62■■□□□ 1.05
SREBF1-221ENST00000583080 LAMB4A4D0S4 1761 aa21.61■■□□□ 1.05
SREBF1-221ENST00000583080 U2AF1L5P0DN76 240 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-221ENST00000583080 NPR1P16066 1061 aa21.61■■□□□ 1.05
SREBF1-221ENST00000583080 U2AF1Q01081 240 aaKnown RBP eCLIP21.61■■□□□ 1.05
SREBF1-221ENST00000583080 L3MBTL3Q96JM7 780 aaPredicted RBP21.61■■□□□ 1.05
SREBF1-221ENST00000583080 NIP7Q9Y221 180 aaKnown RBP eCLIP21.61■■□□□ 1.05
SREBF1-221ENST00000583080 PASKQ96RG2 1323 aa21.6■■□□□ 1.05
SREBF1-221ENST00000583080 KLRG2A4D1S0 409 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-221ENST00000583080 FAM177BA6PVY3 158 aa21.6■■□□□ 1.05
SREBF1-221ENST00000583080 RTF1Q92541 710 aaKnown RBP21.6■■□□□ 1.05
SREBF1-221ENST00000583080 TAF1DQ9H5J8 278 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-221ENST00000583080 ZNF277Q9NRM2 450 aaPredicted RBP21.6■■□□□ 1.05
SREBF1-221ENST00000583080 IQCA1LA6NCM1 817 aa21.59■■□□□ 1.05
SREBF1-221ENST00000583080 FKBP4Q02790 459 aaKnown RBP eCLIP21.59■■□□□ 1.05
SREBF1-221ENST00000583080 CNTNAP1P78357 1384 aa21.59■■□□□ 1.05
SREBF1-221ENST00000583080 ADAMTSL1Q8N6G6 1762 aa21.59■■□□□ 1.05
SREBF1-221ENST00000583080 PPP2R1AP30153 589 aa21.58■■□□□ 1.05
SREBF1-221ENST00000583080 HLFQ16534 295 aa21.58■■□□□ 1.05
SREBF1-221ENST00000583080 LDHDQ86WU2 507 aa21.58■■□□□ 1.05
SREBF1-221ENST00000583080 NUDCQ9Y266 331 aa21.58■■□□□ 1.05
SREBF1-221ENST00000583080 ABCC12Q96J65 1359 aa21.57■■□□□ 1.04
SREBF1-221ENST00000583080 SNED1Q8TER0 1413 aa21.56■■□□□ 1.04
SREBF1-221ENST00000583080 TPTE2Q6XPS3 522 aa21.56■■□□□ 1.04
SREBF1-221ENST00000583080 RGL2O15211 777 aa21.55■■□□□ 1.04
SREBF1-221ENST00000583080 EAPPQ56P03 285 aaPredicted RBP21.55■■□□□ 1.04
SREBF1-221ENST00000583080 MIS18AQ9NYP9 233 aa21.55■■□□□ 1.04
SREBF1-221ENST00000583080 KDM3BQ7LBC6 1761 aa21.55■■□□□ 1.04
SREBF1-221ENST00000583080 COL4A5P29400 1685 aa21.54■■□□□ 1.04
SREBF1-221ENST00000583080 RNF123Q5XPI4 1314 aa21.54■■□□□ 1.04
SREBF1-221ENST00000583080 FOXN1O15353 648 aa21.53■■□□□ 1.04
SREBF1-221ENST00000583080 ITGBL1O95965 494 aaPredicted RBP21.53■■□□□ 1.04
SREBF1-221ENST00000583080 RTKN2Q8IZC4 609 aa21.53■■□□□ 1.04
SREBF1-221ENST00000583080 HACL1Q9UJ83 578 aa21.53■■□□□ 1.04
SREBF1-221ENST00000583080 DLG5Q8TDM6 1919 aa21.53■■□□□ 1.04
SREBF1-221ENST00000583080 HTATSF1O43719 755 aaKnown RBP21.52■■□□□ 1.04
SREBF1-221ENST00000583080 IARSP41252 1262 aaKnown RBP21.52■■□□□ 1.04
SREBF1-221ENST00000583080 NUTM1Q86Y26 1132 aa21.52■■□□□ 1.04
SREBF1-221ENST00000583080 NUP98P52948 1817 aa21.51■■□□□ 1.03
SREBF1-221ENST00000583080 FZD9O00144 591 aa21.51■■□□□ 1.03
SREBF1-221ENST00000583080 EPHX2P34913 555 aa21.51■■□□□ 1.03
SREBF1-221ENST00000583080 VEGFBP49765 207 aa21.51■■□□□ 1.03
SREBF1-221ENST00000583080 TAF7Q15545 349 aaPredicted RBP21.51■■□□□ 1.03
SREBF1-221ENST00000583080 SLC51AQ86UW1 340 aa21.51■■□□□ 1.03
SREBF1-221ENST00000583080 SYNE4Q8N205 404 aa21.51■■□□□ 1.03
SREBF1-221ENST00000583080 NGEFQ8N5V2 710 aa21.51■■□□□ 1.03
SREBF1-221ENST00000583080 TMEM88BA6NKF7 163 aa21.5■■□□□ 1.03
SREBF1-221ENST00000583080 GTF2E1P29083 439 aaPredicted RBP21.5■■□□□ 1.03
SREBF1-221ENST00000583080 CRY2Q49AN0 593 aa21.5■■□□□ 1.03
SREBF1-221ENST00000583080 CLEC11AQ9Y240 323 aa21.5■■□□□ 1.03
SREBF1-221ENST00000583080 LTBP1Q14766 1721 aa21.49■■□□□ 1.03
SREBF1-221ENST00000583080 ALDH1B1P30837 517 aa21.49■■□□□ 1.03
SREBF1-221ENST00000583080 MAP1SQ66K74 1059 aaPredicted RBP21.49■■□□□ 1.03
SREBF1-221ENST00000583080 TTLL7Q6ZT98 887 aa21.48■■□□□ 1.03
SREBF1-221ENST00000583080 UBN2Q6ZU65 1347 aa21.48■■□□□ 1.03
SREBF1-221ENST00000583080 PSMD1Q99460 953 aa21.47■■□□□ 1.03
SREBF1-221ENST00000583080 MAP3K15Q6ZN16 1313 aa21.47■■□□□ 1.03
SREBF1-221ENST00000583080 RIC1Q4ADV7 1423 aa21.46■■□□□ 1.03
SREBF1-221ENST00000583080 GPTP24298 496 aa21.46■■□□□ 1.03
SREBF1-221ENST00000583080 GPC2Q8N158 579 aa21.46■■□□□ 1.03
SREBF1-221ENST00000583080 THUMPD2Q9BTF0 503 aaKnown RBP21.46■■□□□ 1.03
SREBF1-221ENST00000583080 NYXQ9GZU5 481 aa21.46■■□□□ 1.03
SREBF1-221ENST00000583080 ERVV-1B6SEH8 477 aa21.45■■□□□ 1.02
SREBF1-221ENST00000583080 EIF4A1P60842 406 aaKnown RBP21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms