RNA–Protein interactions for RNA: ENST00000582818.5

ERBB2-213, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 529 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-213ENST00000582818 PCNTO95613 3336 aa18.61■□□□□ 0.57
ERBB2-213ENST00000582818 COL11A2P13942 1736 aaPredicted RBP18.61■□□□□ 0.57
ERBB2-213ENST00000582818 U2AF1L5P0DN76 240 aaPredicted RBP18.61■□□□□ 0.57
ERBB2-213ENST00000582818 U2AF1Q01081 240 aaKnown RBP eCLIP18.61■□□□□ 0.57
ERBB2-213ENST00000582818 DZIP3Q86Y13 1208 aaKnown RBP18.61■□□□□ 0.57
ERBB2-213ENST00000582818 KLRG1Q96E93 195 aa18.61■□□□□ 0.57
ERBB2-213ENST00000582818 PRKRIP1Q9H875 184 aaPredicted RBP18.61■□□□□ 0.57
ERBB2-213ENST00000582818 ZNF622Q969S3 477 aaKnown RBP eCLIP18.6■□□□□ 0.57
ERBB2-213ENST00000582818 ZNF330Q9Y3S2 320 aaPredicted RBP18.6■□□□□ 0.57
ERBB2-213ENST00000582818 MYBBP1AQ9BQG0 1328 aaKnown RBP18.59■□□□□ 0.57
ERBB2-213ENST00000582818 SRGNP10124 158 aa18.59■□□□□ 0.57
ERBB2-213ENST00000582818 PRELPP51888 382 aa18.59■□□□□ 0.57
ERBB2-213ENST00000582818 MASTLQ96GX5 879 aa18.59■□□□□ 0.57
ERBB2-213ENST00000582818 USP16Q9Y5T5 823 aa18.59■□□□□ 0.57
ERBB2-213ENST00000582818 SLX4Q8IY92 1834 aa18.58■□□□□ 0.57
ERBB2-213ENST00000582818 NPHP1O15259 732 aa18.58■□□□□ 0.56
ERBB2-213ENST00000582818 KLRG2A4D1S0 409 aaPredicted RBP18.57■□□□□ 0.56
ERBB2-213ENST00000582818 ANP32CO43423 234 aa18.57■□□□□ 0.56
ERBB2-213ENST00000582818 KCNQ3O43525 872 aa18.57■□□□□ 0.56
ERBB2-213ENST00000582818 C21orf2O43822 256 aa18.57■□□□□ 0.56
ERBB2-213ENST00000582818 TAOK3Q9H2K8 898 aa18.57■□□□□ 0.56
ERBB2-213ENST00000582818 TAF7Q15545 349 aaPredicted RBP18.56■□□□□ 0.56
ERBB2-213ENST00000582818 ERFEQ4G0M1 354 aa18.56■□□□□ 0.56
ERBB2-213ENST00000582818 NEFMP07197 916 aa18.55■□□□□ 0.56
ERBB2-213ENST00000582818 TPTE2Q6XPS3 522 aa18.55■□□□□ 0.56
ERBB2-213ENST00000582818 NBPF5PQ86XG9 351 aaPredicted RBP18.55■□□□□ 0.56
ERBB2-213ENST00000582818 PNISRQ8TF01 805 aaKnown RBP18.55■□□□□ 0.56
ERBB2-213ENST00000582818 PNNQ9H307 717 aaKnown RBP18.55■□□□□ 0.56
ERBB2-213ENST00000582818 CACNA1SQ13698 1873 aa18.54■□□□□ 0.56
ERBB2-213ENST00000582818 PRPF40BQ6NWY9 871 aaKnown RBP18.54■□□□□ 0.56
ERBB2-213ENST00000582818 MCM10Q7L590 875 aa18.54■□□□□ 0.56
ERBB2-213ENST00000582818 LAMB4A4D0S4 1761 aa18.54■□□□□ 0.56
ERBB2-213ENST00000582818 DLG5Q8TDM6 1919 aa18.53■□□□□ 0.56
ERBB2-213ENST00000582818 NPR1P16066 1061 aa18.53■□□□□ 0.56
ERBB2-213ENST00000582818 SCN4AP35499 1836 aa18.53■□□□□ 0.56
ERBB2-213ENST00000582818 POTECB2RU33 542 aa18.52■□□□□ 0.56
ERBB2-213ENST00000582818 C7orf43Q8WVR3 580 aa18.52■□□□□ 0.56
ERBB2-213ENST00000582818 NBPF26B4DH59 902 aa18.51■□□□□ 0.55
ERBB2-213ENST00000582818 NBPF10Q6P3W6 841 aaKnown RBP18.51■□□□□ 0.55
ERBB2-213ENST00000582818 NBPF15Q8N660 670 aa18.51■□□□□ 0.55
ERBB2-213ENST00000582818 KDM3BQ7LBC6 1761 aa18.5■□□□□ 0.55
ERBB2-213ENST00000582818 ERVV-1B6SEH8 477 aa18.5■□□□□ 0.55
ERBB2-213ENST00000582818 CCDC93Q567U6 631 aa18.5■□□□□ 0.55
ERBB2-213ENST00000582818 RTKN2Q8IZC4 609 aa18.5■□□□□ 0.55
ERBB2-213ENST00000582818 CCDC24Q8N4L8 307 aa18.5■□□□□ 0.55
ERBB2-213ENST00000582818 NIP7Q9Y221 180 aaKnown RBP eCLIP18.5■□□□□ 0.55
ERBB2-213ENST00000582818 NUP98P52948 1817 aa18.49■□□□□ 0.55
ERBB2-213ENST00000582818 PRAMEF22A3QJZ6 481 aa18.49■□□□□ 0.55
ERBB2-213ENST00000582818 IQCA1LA6NCM1 817 aa18.49■□□□□ 0.55
ERBB2-213ENST00000582818 ALDH1B1P30837 517 aa18.49■□□□□ 0.55
ERBB2-213ENST00000582818 L3MBTL3Q96JM7 780 aaPredicted RBP18.49■□□□□ 0.55
ERBB2-213ENST00000582818 NYXQ9GZU5 481 aa18.49■□□□□ 0.55
ERBB2-213ENST00000582818 HTRA3P83110 453 aa18.48■□□□□ 0.55
ERBB2-213ENST00000582818 DCTN1Q14203 1278 aa18.48■□□□□ 0.55
ERBB2-213ENST00000582818 GRIPAP1Q4V328 841 aa18.48■□□□□ 0.55
ERBB2-213ENST00000582818 ZNF219Q9P2Y4 722 aaPredicted RBP18.48■□□□□ 0.55
ERBB2-213ENST00000582818 IBTKQ9P2D0 1353 aaPredicted RBP18.47■□□□□ 0.55
ERBB2-213ENST00000582818 PIP4K2AP48426 406 aaPredicted RBP18.47■□□□□ 0.55
ERBB2-213ENST00000582818 FKBP4Q02790 459 aaKnown RBP eCLIP18.47■□□□□ 0.55
ERBB2-213ENST00000582818 CHADLQ6NUI6 762 aa18.47■□□□□ 0.55
ERBB2-213ENST00000582818 RIC1Q4ADV7 1423 aa18.47■□□□□ 0.55
ERBB2-213ENST00000582818 CRY2Q49AN0 593 aa18.46■□□□□ 0.55
ERBB2-213ENST00000582818 CC2D2BQ6DHV5 1058 aa18.46■□□□□ 0.55
ERBB2-213ENST00000582818 PLEKHF1Q96S99 279 aa18.46■□□□□ 0.55
ERBB2-213ENST00000582818 ERBB4Q15303 1308 aa18.46■□□□□ 0.55
ERBB2-213ENST00000582818 NFE2L2Q16236 605 aa18.45■□□□□ 0.54
ERBB2-213ENST00000582818 CREBZFQ9NS37 354 aa18.45■□□□□ 0.54
ERBB2-213ENST00000582818 DDNO94850 711 aaPredicted RBP18.44■□□□□ 0.54
ERBB2-213ENST00000582818 GTF2E1P29083 439 aaPredicted RBP18.44■□□□□ 0.54
ERBB2-213ENST00000582818 EIF4A1P60842 406 aaKnown RBP18.44■□□□□ 0.54
ERBB2-213ENST00000582818 MAP3K15Q6ZN16 1313 aa18.44■□□□□ 0.54
ERBB2-213ENST00000582818 WDR43Q15061 677 aaKnown RBP eCLIP18.43■□□□□ 0.54
ERBB2-213ENST00000582818 HLFQ16534 295 aa18.43■□□□□ 0.54
ERBB2-213ENST00000582818 LDHDQ86WU2 507 aa18.43■□□□□ 0.54
ERBB2-213ENST00000582818 PSMD1Q99460 953 aa18.43■□□□□ 0.54
ERBB2-213ENST00000582818 BABAM1Q9NWV8 329 aa18.43■□□□□ 0.54
ERBB2-213ENST00000582818 HOXA10P31260 410 aaPredicted RBP18.42■□□□□ 0.54
ERBB2-213ENST00000582818 KIF6Q6ZMV9 814 aa18.42■□□□□ 0.54
ERBB2-213ENST00000582818 TAF1DQ9H5J8 278 aaPredicted RBP18.41■□□□□ 0.54
ERBB2-213ENST00000582818 MIS18AQ9NYP9 233 aa18.41■□□□□ 0.54
ERBB2-213ENST00000582818 MAPK8IP3Q9UPT6 1336 aa18.41■□□□□ 0.54
ERBB2-213ENST00000582818 FZD9O00144 591 aa18.4■□□□□ 0.54
ERBB2-213ENST00000582818 PNMA8AQ86V59 439 aaPredicted RBP18.4■□□□□ 0.54
ERBB2-213ENST00000582818 SNED1Q8TER0 1413 aa18.4■□□□□ 0.54
ERBB2-213ENST00000582818 IARSP41252 1262 aaKnown RBP18.39■□□□□ 0.53
ERBB2-213ENST00000582818 PASKQ96RG2 1323 aa18.39■□□□□ 0.53
ERBB2-213ENST00000582818 PARP10Q53GL7 1025 aa18.38■□□□□ 0.53
ERBB2-213ENST00000582818 COL13A1Q5TAT6 717 aaPredicted RBP18.38■□□□□ 0.53
ERBB2-213ENST00000582818 GIGYF2Q6Y7W6 1299 aaKnown RBP18.38■□□□□ 0.53
ERBB2-213ENST00000582818 ZNF34Q8IZ26 560 aa18.38■□□□□ 0.53
ERBB2-213ENST00000582818 GPC2Q8N158 579 aa18.38■□□□□ 0.53
ERBB2-213ENST00000582818 CRAMP1Q96RY5 1269 aa18.38■□□□□ 0.53
ERBB2-213ENST00000582818 ZNF277Q9NRM2 450 aaPredicted RBP18.38■□□□□ 0.53
ERBB2-213ENST00000582818 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
ERBB2-213ENST00000582818 LMOD3Q0VAK6 560 aa18.37■□□□□ 0.53
ERBB2-213ENST00000582818 SYNE4Q8N205 404 aa18.37■□□□□ 0.53
ERBB2-213ENST00000582818 JDP2Q8WYK2 163 aa18.37■□□□□ 0.53
ERBB2-213ENST00000582818 RPGRQ92834 1020 aaKnown RBP18.37■□□□□ 0.53
ERBB2-213ENST00000582818 VPS33BQ9H267 617 aa18.37■□□□□ 0.53
ERBB2-213ENST00000582818 RRP7AQ9Y3A4 280 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms