RNA–Protein interactions for RNA: ENST00000582730.6

SRSF1-205, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 2 BASIC

Gene SRSF1, Length 3,117 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-205ENST00000582730 TOM1L2Q6ZVM7 507 aa16.61■□□□□ 0.25
SRSF1-205ENST00000582730 DCAF5Q96JK2 942 aa16.61■□□□□ 0.25
SRSF1-205ENST00000582730 IL25Q9H293 177 aa16.61■□□□□ 0.25
SRSF1-205ENST00000582730 LARP1Q6PKG0 1096 aaKnown RBP16.61■□□□□ 0.25
SRSF1-205ENST00000582730 UPF3BQ9BZI7 483 aaKnown RBP16.61■□□□□ 0.25
SRSF1-205ENST00000582730 GOLGA6L22H0YM25 854 aa16.6■□□□□ 0.25
SRSF1-205ENST00000582730 BRINP3Q76B58 766 aa16.6■□□□□ 0.25
SRSF1-205ENST00000582730 AACSQ86V21 672 aa16.6■□□□□ 0.25
SRSF1-205ENST00000582730 GRPEL1Q9HAV7 217 aa16.6■□□□□ 0.25
SRSF1-205ENST00000582730 CWC27Q6UX04 472 aaKnown RBP16.6■□□□□ 0.25
SRSF1-205ENST00000582730 IGKV5-2P06315 115 aa16.59■□□□□ 0.25
SRSF1-205ENST00000582730 SNRPA1P09661 255 aaKnown RBP16.59■□□□□ 0.25
SRSF1-205ENST00000582730 PKP1Q13835 747 aa16.59■□□□□ 0.25
SRSF1-205ENST00000582730 VSIG10Q8N0Z9 540 aa16.59■□□□□ 0.25
SRSF1-205ENST00000582730 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.59■□□□□ 0.253e-19■■□□□ 14.5
SRSF1-205ENST00000582730 G3BP1Q13283 466 aaKnown RBP eCLIP16.59■□□□□ 0.25
SRSF1-205ENST00000582730 MTX1Q13505 466 aa16.59■□□□□ 0.25
SRSF1-205ENST00000582730 FOXD4L5Q5VV16 416 aaPredicted RBP16.59■□□□□ 0.25
SRSF1-205ENST00000582730 FOXD4L4Q8WXT5 416 aaPredicted RBP16.59■□□□□ 0.25
SRSF1-205ENST00000582730 FMNL2Q96PY5 1086 aa16.59■□□□□ 0.25
SRSF1-205ENST00000582730 KLHDC4Q8TBB5 520 aa16.59■□□□□ 0.25
SRSF1-205ENST00000582730 GPATCH3Q96I76 525 aa16.59■□□□□ 0.25
SRSF1-205ENST00000582730 DNAJC5Q9H3Z4 198 aa16.59■□□□□ 0.25
SRSF1-205ENST00000582730 RRP9O43818 475 aaKnown RBP16.58■□□□□ 0.24
SRSF1-205ENST00000582730 GLRX3O76003 335 aaKnown RBP16.58■□□□□ 0.24
SRSF1-205ENST00000582730 NUCB2P80303 420 aa16.58■□□□□ 0.24
SRSF1-205ENST00000582730 AK9Q5TCS8 1911 aa16.58■□□□□ 0.24
SRSF1-205ENST00000582730 KIAA1211Q6ZU35 1233 aa16.58■□□□□ 0.24
SRSF1-205ENST00000582730 ERC1Q8IUD2 1116 aa16.58■□□□□ 0.24
SRSF1-205ENST00000582730 STRN4Q9NRL3 753 aa16.58■□□□□ 0.24
SRSF1-205ENST00000582730 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
SRSF1-205ENST00000582730 ESPNB1AK53 854 aa16.57■□□□□ 0.24
SRSF1-205ENST00000582730 ANKRD13DQ6ZTN6 518 aa16.57■□□□□ 0.24
SRSF1-205ENST00000582730 CCDC8Q9H0W5 538 aaPredicted RBP16.57■□□□□ 0.24
SRSF1-205ENST00000582730 NEURL1BA8MQ27 555 aa16.57■□□□□ 0.24
SRSF1-205ENST00000582730 KAZALD1Q96I82 304 aa16.57■□□□□ 0.24
SRSF1-205ENST00000582730 TMX3Q96JJ7 454 aa16.57■□□□□ 0.24
SRSF1-205ENST00000582730 ECHDC1Q9NTX5 307 aa16.57■□□□□ 0.24
SRSF1-205ENST00000582730 ERBB4Q15303 1308 aa16.57■□□□□ 0.24
SRSF1-205ENST00000582730 ATP5J2-PTCD1G3V325 749 aa16.56■□□□□ 0.24
SRSF1-205ENST00000582730 PTCD1O75127 700 aaKnown RBP16.56■□□□□ 0.24
SRSF1-205ENST00000582730 BAG4O95429 457 aaKnown RBP16.56■□□□□ 0.24
SRSF1-205ENST00000582730 MCTP1Q6DN14 999 aa16.56■□□□□ 0.24
SRSF1-205ENST00000582730 SIPA1L3O60292 1781 aaPredicted RBP16.56■□□□□ 0.24
SRSF1-205ENST00000582730 DDX54Q8TDD1 881 aaKnown RBP16.56■□□□□ 0.24
SRSF1-205ENST00000582730 GCKRQ14397 625 aa16.56■□□□□ 0.24
SRSF1-205ENST00000582730 ZMYND15Q9H091 742 aa16.56■□□□□ 0.24
SRSF1-205ENST00000582730 TTC41PQ6P2S7 1318 aa16.56■□□□□ 0.24
SRSF1-205ENST00000582730 METTL22Q9BUU2 404 aaPredicted RBP16.55■□□□□ 0.24
SRSF1-205ENST00000582730 CWC22Q9HCG8 908 aaKnown RBP16.55■□□□□ 0.24
SRSF1-205ENST00000582730 SGSM2O43147 1006 aa16.55■□□□□ 0.24
SRSF1-205ENST00000582730 SCN11AQ9UI33 1791 aa16.55■□□□□ 0.24
SRSF1-205ENST00000582730 NCLP19338 710 aaKnown RBP16.54■□□□□ 0.24
SRSF1-205ENST00000582730 ANAPC15P60006 121 aa16.54■□□□□ 0.24
SRSF1-205ENST00000582730 ZNF335Q9H4Z2 1342 aaPredicted RBP16.54■□□□□ 0.24
SRSF1-205ENST00000582730 C5P01031 1676 aa16.54■□□□□ 0.24
SRSF1-205ENST00000582730 TUBGCP6Q96RT7 1819 aa16.54■□□□□ 0.24
SRSF1-205ENST00000582730 UBE3BQ7Z3V4 1068 aa16.54■□□□□ 0.24
SRSF1-205ENST00000582730 COL18A1P39060 1754 aa16.54■□□□□ 0.24
SRSF1-205ENST00000582730 SASH1O94885 1247 aa16.54■□□□□ 0.24
SRSF1-205ENST00000582730 EPHA10Q5JZY3 1008 aa16.54■□□□□ 0.24
SRSF1-205ENST00000582730 ZCRB1Q8TBF4 217 aaKnown RBP16.54■□□□□ 0.24
SRSF1-205ENST00000582730 SLAIN2Q9P270 581 aa16.54■□□□□ 0.24
SRSF1-205ENST00000582730 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.54■□□□□ 0.24
SRSF1-205ENST00000582730 DDX49Q9Y6V7 483 aaKnown RBP16.54■□□□□ 0.24
SRSF1-205ENST00000582730 MCM2P49736 904 aa16.53■□□□□ 0.24
SRSF1-205ENST00000582730 SKOR2Q2VWA4 1001 aaPredicted RBP16.53■□□□□ 0.24
SRSF1-205ENST00000582730 EAF2Q96CJ1 260 aaPredicted RBP16.53■□□□□ 0.24
SRSF1-205ENST00000582730 CPDO75976 1380 aa16.53■□□□□ 0.24
SRSF1-205ENST00000582730 WDR17Q8IZU2 1322 aa16.52■□□□□ 0.24
SRSF1-205ENST00000582730 PTMSP20962 102 aa16.52■□□□□ 0.24
SRSF1-205ENST00000582730 HSPA4P34932 840 aa16.52■□□□□ 0.24
SRSF1-205ENST00000582730 EVA1CP58658 441 aa16.52■□□□□ 0.24
SRSF1-205ENST00000582730 TLR7Q9NYK1 1049 aaKnown RBP16.52■□□□□ 0.24
SRSF1-205ENST00000582730 ISY1Q9ULR0 285 aaKnown RBP16.52■□□□□ 0.24
SRSF1-205ENST00000582730 CHMP3Q9Y3E7 222 aa16.52■□□□□ 0.24
SRSF1-205ENST00000582730 ADAMTS7Q9UKP4 1686 aa16.52■□□□□ 0.24
SRSF1-205ENST00000582730 RAD50Q92878 1312 aa16.52■□□□□ 0.24
SRSF1-205ENST00000582730 UTYO14607 1347 aa16.52■□□□□ 0.23
SRSF1-205ENST00000582730 GAS2L3Q86XJ1 694 aa16.52■□□□□ 0.23
SRSF1-205ENST00000582730 RUFY2Q8WXA3 655 aa16.52■□□□□ 0.23
SRSF1-205ENST00000582730 BOLA2Q9H3K6 86 aa16.52■□□□□ 0.23
SRSF1-205ENST00000582730 A0A087WZG4 1122 aa16.51■□□□□ 0.23
SRSF1-205ENST00000582730 LARP6Q9BRS8 491 aaKnown RBP16.51■□□□□ 0.23
SRSF1-205ENST00000582730 ZNF330Q9Y3S2 320 aaPredicted RBP16.51■□□□□ 0.23
SRSF1-205ENST00000582730 PCDH11XQ9BZA7 1347 aa16.51■□□□□ 0.23
SRSF1-205ENST00000582730 PCDH11YQ9BZA8 1340 aa16.51■□□□□ 0.23
SRSF1-205ENST00000582730 TRIM44Q96DX7 344 aaPredicted RBP16.51■□□□□ 0.23
SRSF1-205ENST00000582730 CHAMP1Q96JM3 812 aa16.51■□□□□ 0.23
SRSF1-205ENST00000582730 LMTK3Q96Q04 1460 aa16.51■□□□□ 0.23
SRSF1-205ENST00000582730 USP42Q9H9J4 1324 aaKnown RBP16.5■□□□□ 0.23
SRSF1-205ENST00000582730 KCNJ4P48050 445 aa16.5■□□□□ 0.23
SRSF1-205ENST00000582730 LSG1Q9H089 658 aaKnown RBP16.5■□□□□ 0.23
SRSF1-205ENST00000582730 CCDC9Q9Y3X0 531 aaKnown RBP16.5■□□□□ 0.23
SRSF1-205ENST00000582730 SNX14Q9Y5W7 946 aa16.5■□□□□ 0.23
SRSF1-205ENST00000582730 FOXD4L6Q3SYB3 417 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-205ENST00000582730 FOXD4L3Q6VB84 417 aaPredicted RBP16.49■□□□□ 0.23
SRSF1-205ENST00000582730 RASEFQ8IZ41 740 aa16.49■□□□□ 0.23
SRSF1-205ENST00000582730 EVI5LQ96CN4 794 aa16.49■□□□□ 0.23
SRSF1-205ENST00000582730 CYP2E1P05181 493 aaPredicted RBP16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms