RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 DISP2A7MBM2 1401 aa14.32□□□□□ -0.12
SS18-221ENST00000582448 ABTB2Q8N961 1025 aa14.32□□□□□ -0.12
SS18-221ENST00000582448 ALS2Q96Q42 1657 aa14.32□□□□□ -0.12
SS18-221ENST00000582448 SPTLC1O15269 473 aa14.31□□□□□ -0.12
SS18-221ENST00000582448 DIXDC1Q155Q3 683 aa14.31□□□□□ -0.12
SS18-221ENST00000582448 TRIM67Q6ZTA4 783 aa14.31□□□□□ -0.12
SS18-221ENST00000582448 ACEP12821 1306 aa14.31□□□□□ -0.12
SS18-221ENST00000582448 ADGRB1O14514 1584 aa14.3□□□□□ -0.12
SS18-221ENST00000582448 GFRA3O60609 400 aa14.3□□□□□ -0.12
SS18-221ENST00000582448 MYSM1Q5VVJ2 828 aa14.3□□□□□ -0.12
SS18-221ENST00000582448 ZNF598Q86UK7 904 aaKnown RBP14.3□□□□□ -0.12
SS18-221ENST00000582448 TCP11L2Q8N4U5 519 aa14.3□□□□□ -0.12
SS18-221ENST00000582448 KDM4CQ9H3R0 1056 aa14.3□□□□□ -0.12
SS18-221ENST00000582448 ADGRB2O60241 1585 aa14.3□□□□□ -0.12
SS18-221ENST00000582448 JUNDP17535 347 aa14.29□□□□□ -0.12
SS18-221ENST00000582448 GJA5P36382 358 aa14.29□□□□□ -0.12
SS18-221ENST00000582448 RIC3Q7Z5B4 369 aa14.29□□□□□ -0.12
SS18-221ENST00000582448 SPON1Q9HCB6 807 aa14.29□□□□□ -0.12
SS18-221ENST00000582448 THSD7AQ9UPZ6 1657 aa14.29□□□□□ -0.12
SS18-221ENST00000582448 ZNF697Q5TEC3 545 aa14.28□□□□□ -0.12
SS18-221ENST00000582448 TNS1Q9HBL0 1735 aaKnown RBP14.27□□□□□ -0.12
SS18-221ENST00000582448 SSH2Q76I76 1423 aa14.27□□□□□ -0.12
SS18-221ENST00000582448 PARD3Q8TEW0 1356 aa14.27□□□□□ -0.12
SS18-221ENST00000582448 KCNQ2O43526 872 aa14.27□□□□□ -0.13
SS18-221ENST00000582448 RPIAP49247 311 aa14.27□□□□□ -0.13
SS18-221ENST00000582448 LIMD1Q9UGP4 676 aa14.27□□□□□ -0.13
SS18-221ENST00000582448 MTMR2Q13614 643 aa14.26□□□□□ -0.13
SS18-221ENST00000582448 DIEXFQ68CQ4 756 aaKnown RBP14.26□□□□□ -0.13
SS18-221ENST00000582448 NLRP13Q86W25 1043 aa14.26□□□□□ -0.13
SS18-221ENST00000582448 PDZRN3Q9UPQ7 1066 aa14.26□□□□□ -0.13
SS18-221ENST00000582448 GCP02774 474 aa14.25□□□□□ -0.13
SS18-221ENST00000582448 SRPK2P78362 688 aaKnown RBP14.25□□□□□ -0.13
SS18-221ENST00000582448 TPRNQ4KMQ1 711 aa14.25□□□□□ -0.13
SS18-221ENST00000582448 L3MBTL2Q969R5 705 aa14.25□□□□□ -0.13
SS18-221ENST00000582448 FAM117AQ9C073 453 aa14.25□□□□□ -0.13
SS18-221ENST00000582448 THRAP3Q9Y2W1 955 aaKnown RBP14.25□□□□□ -0.13
SS18-221ENST00000582448 ATP7BP35670 1465 aa14.25□□□□□ -0.13
SS18-221ENST00000582448 PLEKHG3A1L390 1219 aa14.24□□□□□ -0.13
SS18-221ENST00000582448 CSPP1Q1MSJ5 1256 aa14.24□□□□□ -0.13
SS18-221ENST00000582448 PRR7Q8TB68 274 aa14.24□□□□□ -0.13
SS18-221ENST00000582448 CAMTA1Q9Y6Y1 1673 aa14.23□□□□□ -0.13
SS18-221ENST00000582448 CCDC24Q8N4L8 307 aa14.23□□□□□ -0.13
SS18-221ENST00000582448 CRYBG1Q9Y4K1 1723 aa14.23□□□□□ -0.13
SS18-221ENST00000582448 POLR3AO14802 1390 aaPredicted RBP14.22□□□□□ -0.13
SS18-221ENST00000582448 GDF9O60383 454 aa14.22□□□□□ -0.13
SS18-221ENST00000582448 TOM1L2Q6ZVM7 507 aa14.22□□□□□ -0.13
SS18-221ENST00000582448 NRG2O14511 850 aaPredicted RBP14.21□□□□□ -0.13
SS18-221ENST00000582448 DDB1Q16531 1140 aa14.21□□□□□ -0.13
SS18-221ENST00000582448 NBPF1Q3BBV0 1214 aa14.21□□□□□ -0.13
SS18-221ENST00000582448 PHRF1Q9P1Y6 1649 aaKnown RBP14.21□□□□□ -0.13
SS18-221ENST00000582448 LAPTM4AQ15012 233 aa14.2□□□□□ -0.14
SS18-221ENST00000582448 QPCTQ16769 361 aa14.2□□□□□ -0.14
SS18-221ENST00000582448 PTF1AQ7RTS3 328 aa14.2□□□□□ -0.14
SS18-221ENST00000582448 CPDO75976 1380 aa14.2□□□□□ -0.14
SS18-221ENST00000582448 USP19O94966 1318 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 SPDYE5A6NIY4 337 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 C11orf95C9JLR9 678 aaPredicted RBP14.19□□□□□ -0.14
SS18-221ENST00000582448 CFAP99D6REC4 459 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 TNFRSF10AO00220 468 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 ZBTB24O43167 697 aaPredicted RBP14.19□□□□□ -0.14
SS18-221ENST00000582448 ZBTB7AO95365 584 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 Q6ZNB5 142 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 NUDT12Q9BQG2 462 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 ZBTB3Q9H5J0 574 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 POLR3EQ9NVU0 708 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 PKD2L1Q9P0L9 805 aa14.19□□□□□ -0.14
SS18-221ENST00000582448 ITSN1Q15811 1721 aa14.18□□□□□ -0.14
SS18-221ENST00000582448 PLSCR1O15162 318 aa14.18□□□□□ -0.14
SS18-221ENST00000582448 CD2BP2O95400 341 aaKnown RBP14.18□□□□□ -0.14
SS18-221ENST00000582448 PTCRAQ6ISU1 281 aaPredicted RBP14.18□□□□□ -0.14
SS18-221ENST00000582448 PDGFDQ9GZP0 370 aaPredicted RBP14.18□□□□□ -0.14
SS18-221ENST00000582448 CABP1Q9NZU7 370 aa14.18□□□□□ -0.14
SS18-221ENST00000582448 PPIP5K1Q6PFW1 1433 aa14.17□□□□□ -0.14
SS18-221ENST00000582448 LCE2BO14633 110 aa14.17□□□□□ -0.14
SS18-221ENST00000582448 CSB-PGBD3P0DP91 1061 aa14.17□□□□□ -0.14
SS18-221ENST00000582448 CLK2P49760 499 aaKnown RBP14.17□□□□□ -0.14
SS18-221ENST00000582448 PRPF38BQ5VTL8 546 aaKnown RBP14.17□□□□□ -0.14
SS18-221ENST00000582448 NUP188Q5SRE5 1749 aa14.17□□□□□ -0.14
SS18-221ENST00000582448 ARHGEF28Q8N1W1 1705 aaKnown RBP14.17□□□□□ -0.14
SS18-221ENST00000582448 COL5A2P05997 1499 aaPredicted RBP14.17□□□□□ -0.14
SS18-221ENST00000582448 OVOS2A0A0G2JMS6 1433 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 OVOS2A0A0J9YW53 1432 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 CRB1P82279 1406 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 OVOS2Q6IE36 1432 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 PRR20EP86478 221 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 PRR20CP86479 221 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 PRR20DP86480 221 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 PRR20BP86481 221 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 PRR20AP86496 221 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 FOXC1Q12948 553 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 TRIM32Q13049 653 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 TUSC1Q2TAM9 212 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 RSPH6AQ9H0K4 717 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 NINLQ9Y2I6 1382 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 NRKQ7Z2Y5 1582 aa14.16□□□□□ -0.14
SS18-221ENST00000582448 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.14
SS18-221ENST00000582448 RREB1Q92766 1687 aa14.15□□□□□ -0.14
SS18-221ENST00000582448 LILRB3O75022 631 aa14.15□□□□□ -0.14
SS18-221ENST00000582448 MARCH10Q8NA82 808 aaPredicted RBP14.15□□□□□ -0.14
SS18-221ENST00000582448 EIF4G2P78344 907 aaKnown RBP eCLIP14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms