RNA–Protein interactions for RNA: ENST00000582370.1

PDLIM1P3-201, Transcript of PDZ and LIM domain 1 pseudogene 3, humanhuman

BASIC

Gene PDLIM1P3, Length 599 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P3-201ENST00000582370 BRIP1Q9BX63 1249 aa11.66□□□□□ -0.54
PDLIM1P3-201ENST00000582370 BCL2L12Q9HB09 334 aa11.66□□□□□ -0.54
PDLIM1P3-201ENST00000582370 ABT1Q9ULW3 272 aaKnown RBP11.66□□□□□ -0.54
PDLIM1P3-201ENST00000582370 BCORQ6W2J9 1755 aa11.66□□□□□ -0.54
PDLIM1P3-201ENST00000582370 CYP19A1P11511 503 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1P3-201ENST00000582370 ECE1P42892 770 aa11.65□□□□□ -0.54
PDLIM1P3-201ENST00000582370 PNMA8AQ86V59 439 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1P3-201ENST00000582370 CFAP44Q96MT7 982 aa11.65□□□□□ -0.54
PDLIM1P3-201ENST00000582370 ZNF219Q9P2Y4 722 aaPredicted RBP11.65□□□□□ -0.54
PDLIM1P3-201ENST00000582370 POLKQ9UBT6 870 aa11.65□□□□□ -0.54
PDLIM1P3-201ENST00000582370 HACL1Q9UJ83 578 aa11.65□□□□□ -0.54
PDLIM1P3-201ENST00000582370 CLEC11AQ9Y240 323 aa11.65□□□□□ -0.54
PDLIM1P3-201ENST00000582370 EPHX2P34913 555 aa11.64□□□□□ -0.55
PDLIM1P3-201ENST00000582370 CC2D1BQ5T0F9 858 aaKnown RBP11.64□□□□□ -0.55
PDLIM1P3-201ENST00000582370 CNTROBQ8N137 903 aa11.64□□□□□ -0.55
PDLIM1P3-201ENST00000582370 CNKSR1Q969H4 720 aa11.64□□□□□ -0.55
PDLIM1P3-201ENST00000582370 CFAP53Q96M91 514 aa11.64□□□□□ -0.55
PDLIM1P3-201ENST00000582370 ZBTB1Q9Y2K1 713 aa11.64□□□□□ -0.55
PDLIM1P3-201ENST00000582370 CAPNS2Q96L46 248 aa11.63□□□□□ -0.55
PDLIM1P3-201ENST00000582370 MCOLN1Q9GZU1 580 aa11.63□□□□□ -0.55
PDLIM1P3-201ENST00000582370 CA12O43570 354 aa11.62□□□□□ -0.55
PDLIM1P3-201ENST00000582370 STYK1Q6J9G0 422 aa11.62□□□□□ -0.55
PDLIM1P3-201ENST00000582370 PRR5LQ6MZQ0 368 aa11.62□□□□□ -0.55
PDLIM1P3-201ENST00000582370 PRPF40BQ6NWY9 871 aaKnown RBP11.62□□□□□ -0.55
PDLIM1P3-201ENST00000582370 ZNF541Q9H0D2 1346 aa11.61□□□□□ -0.55
PDLIM1P3-201ENST00000582370 MAP1SQ66K74 1059 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1P3-201ENST00000582370 BICDL1Q6ZP65 573 aa11.61□□□□□ -0.55
PDLIM1P3-201ENST00000582370 GPR101Q96P66 508 aaPredicted RBP11.61□□□□□ -0.55
PDLIM1P3-201ENST00000582370 DDX21Q9NR30 783 aaKnown RBP eCLIP11.61□□□□□ -0.55
PDLIM1P3-201ENST00000582370 RNF123Q5XPI4 1314 aa11.6□□□□□ -0.55
PDLIM1P3-201ENST00000582370 A0A087WZG4 1122 aa11.6□□□□□ -0.55
PDLIM1P3-201ENST00000582370 MAP2K2P36507 400 aa11.6□□□□□ -0.55
PDLIM1P3-201ENST00000582370 CCDC93Q567U6 631 aa11.6□□□□□ -0.55
PDLIM1P3-201ENST00000582370 PAXIP1Q6ZW49 1069 aaPredicted RBP11.6□□□□□ -0.55
PDLIM1P3-201ENST00000582370 VSIG10Q8N0Z9 540 aa11.6□□□□□ -0.55
PDLIM1P3-201ENST00000582370 MASTLQ96GX5 879 aa11.6□□□□□ -0.55
PDLIM1P3-201ENST00000582370 SLC52A2Q9HAB3 445 aa11.6□□□□□ -0.55
PDLIM1P3-201ENST00000582370 SRGNP10124 158 aa11.59□□□□□ -0.55
PDLIM1P3-201ENST00000582370 PPP2R1AP30153 589 aa11.59□□□□□ -0.55
PDLIM1P3-201ENST00000582370 FKBP4Q02790 459 aaKnown RBP eCLIP11.59□□□□□ -0.55
PDLIM1P3-201ENST00000582370 PRPF38BQ5VTL8 546 aaKnown RBP11.59□□□□□ -0.55
PDLIM1P3-201ENST00000582370 TBC1D9BQ66K14 1250 aa11.59□□□□□ -0.55
PDLIM1P3-201ENST00000582370 CYP4F22Q6NT55 531 aa11.59□□□□□ -0.55
PDLIM1P3-201ENST00000582370 EIF5P55010 431 aaKnown RBP11.58□□□□□ -0.56
PDLIM1P3-201ENST00000582370 ST5P78524 1137 aa11.58□□□□□ -0.56
PDLIM1P3-201ENST00000582370 GPC2Q8N158 579 aa11.58□□□□□ -0.56
PDLIM1P3-201ENST00000582370 CNBD1Q8NA66 436 aa11.58□□□□□ -0.56
PDLIM1P3-201ENST00000582370 PNNQ9H307 717 aaKnown RBP11.58□□□□□ -0.56
PDLIM1P3-201ENST00000582370 TSKSQ9UJT2 592 aa11.58□□□□□ -0.56
PDLIM1P3-201ENST00000582370 NUDCQ9Y266 331 aa11.58□□□□□ -0.56
PDLIM1P3-201ENST00000582370 SIPA1L3O60292 1781 aaPredicted RBP11.57□□□□□ -0.56
PDLIM1P3-201ENST00000582370 CANXP27824 592 aaKnown RBP11.57□□□□□ -0.56
PDLIM1P3-201ENST00000582370 GRM1Q13255 1194 aa11.57□□□□□ -0.56
PDLIM1P3-201ENST00000582370 DGKZQ13574 1117 aa11.57□□□□□ -0.56
PDLIM1P3-201ENST00000582370 AKAP4Q5JQC9 854 aa11.57□□□□□ -0.56
PDLIM1P3-201ENST00000582370 C7orf43Q8WVR3 580 aa11.57□□□□□ -0.56
PDLIM1P3-201ENST00000582370 TLL2Q9Y6L7 1015 aa11.57□□□□□ -0.56
PDLIM1P3-201ENST00000582370 FZD9O00144 591 aa11.56□□□□□ -0.56
PDLIM1P3-201ENST00000582370 NPHP1O15259 732 aa11.56□□□□□ -0.56
PDLIM1P3-201ENST00000582370 STARD3NLO95772 234 aa11.56□□□□□ -0.56
PDLIM1P3-201ENST00000582370 BRPF1P55201 1214 aaPredicted RBP11.56□□□□□ -0.56
PDLIM1P3-201ENST00000582370 AEBP1Q8IUX7 1158 aa11.56□□□□□ -0.56
PDLIM1P3-201ENST00000582370 CCDC24Q8N4L8 307 aa11.56□□□□□ -0.56
PDLIM1P3-201ENST00000582370 ZNF277Q9NRM2 450 aaPredicted RBP11.56□□□□□ -0.56
PDLIM1P3-201ENST00000582370 AKAP11Q9UKA4 1901 aa11.56□□□□□ -0.56
PDLIM1P3-201ENST00000582370 LMOD1P29536 600 aaPredicted RBP11.55□□□□□ -0.56
PDLIM1P3-201ENST00000582370 IARSP41252 1262 aaKnown RBP11.55□□□□□ -0.56
PDLIM1P3-201ENST00000582370 SLC39A6Q13433 755 aa11.55□□□□□ -0.56
PDLIM1P3-201ENST00000582370 RTKN2Q8IZC4 609 aa11.55□□□□□ -0.56
PDLIM1P3-201ENST00000582370 MIER1Q8N108 512 aa11.55□□□□□ -0.56
PDLIM1P3-201ENST00000582370 SETDB2Q96T68 719 aa11.55□□□□□ -0.56
PDLIM1P3-201ENST00000582370 AOC2O75106 756 aa11.54□□□□□ -0.56
PDLIM1P3-201ENST00000582370 TNNT2P45379 298 aaPredicted RBP11.54□□□□□ -0.56
PDLIM1P3-201ENST00000582370 HHIPL1Q96JK4 782 aa11.54□□□□□ -0.56
PDLIM1P3-201ENST00000582370 MRS2Q9HD23 443 aa11.54□□□□□ -0.56
PDLIM1P3-201ENST00000582370 SNED1Q8TER0 1413 aa11.53□□□□□ -0.56
PDLIM1P3-201ENST00000582370 DIAPH1O60610 1272 aaKnown RBP11.53□□□□□ -0.56
PDLIM1P3-201ENST00000582370 NPR1P16066 1061 aa11.53□□□□□ -0.56
PDLIM1P3-201ENST00000582370 IL6STP40189 918 aaPredicted RBP11.53□□□□□ -0.56
PDLIM1P3-201ENST00000582370 WDR43Q15061 677 aaKnown RBP eCLIP11.53□□□□□ -0.56
PDLIM1P3-201ENST00000582370 CST9Q5W186 159 aa11.53□□□□□ -0.56
PDLIM1P3-201ENST00000582370 SULT6B1Q6IMI4 303 aa11.53□□□□□ -0.56
PDLIM1P3-201ENST00000582370 JDP2Q8WYK2 163 aa11.53□□□□□ -0.56
PDLIM1P3-201ENST00000582370 RNMTO43148 476 aaKnown RBP11.52□□□□□ -0.57
PDLIM1P3-201ENST00000582370 EIF6P56537 245 aaKnown RBP11.52□□□□□ -0.57
PDLIM1P3-201ENST00000582370 FMR1Q06787 632 aaKnown RBP eCLIP11.52□□□□□ -0.57
PDLIM1P3-201ENST00000582370 USP50Q70EL3 339 aaPredicted RBP11.52□□□□□ -0.57
PDLIM1P3-201ENST00000582370 SAPCD2Q86UD0 394 aa11.52□□□□□ -0.57
PDLIM1P3-201ENST00000582370 NGEFQ8N5V2 710 aa11.52□□□□□ -0.57
PDLIM1P3-201ENST00000582370 LGR6Q9HBX8 967 aa11.52□□□□□ -0.57
PDLIM1P3-201ENST00000582370 COL4A5P29400 1685 aa11.52□□□□□ -0.57
PDLIM1P3-201ENST00000582370 NEFMP07197 916 aa11.51□□□□□ -0.57
PDLIM1P3-201ENST00000582370 SOX10P56693 466 aa11.51□□□□□ -0.57
PDLIM1P3-201ENST00000582370 NPM2Q86SE8 214 aaKnown RBP11.51□□□□□ -0.57
PDLIM1P3-201ENST00000582370 TTC5Q8N0Z6 440 aa11.51□□□□□ -0.57
PDLIM1P3-201ENST00000582370 PSMD1Q99460 953 aa11.51□□□□□ -0.57
PDLIM1P3-201ENST00000582370 TEX13AQ9BXU3 409 aaPredicted RBP11.51□□□□□ -0.57
PDLIM1P3-201ENST00000582370 TBC1D2BQ9UPU7 963 aa11.51□□□□□ -0.57
PDLIM1P3-201ENST00000582370 ZNF330Q9Y3S2 320 aaPredicted RBP11.51□□□□□ -0.57
PDLIM1P3-201ENST00000582370 KLRG2A4D1S0 409 aaPredicted RBP11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms