RNA–Protein interactions for RNA: ENST00000581705.5

SNX11-209, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 1,426 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-209ENST00000581705 NRXN2Q9P2S2 1712 aa26.41■■□□□ 1.82
SNX11-209ENST00000581705 SERPINB2P05120 415 aa26.41■■□□□ 1.82
SNX11-209ENST00000581705 CHRNA5P30532 468 aa26.41■■□□□ 1.82
SNX11-209ENST00000581705 DALRD3Q5D0E6 543 aaKnown RBP26.41■■□□□ 1.82
SNX11-209ENST00000581705 ARHGAP27Q6ZUM4 889 aa26.41■■□□□ 1.82
SNX11-209ENST00000581705 GPBP1L1Q9HC44 474 aaPredicted RBP26.41■■□□□ 1.82
SNX11-209ENST00000581705 AFDNP55196 1824 aaKnown RBP26.4■■□□□ 1.82
SNX11-209ENST00000581705 TAF7Q15545 349 aaPredicted RBP26.4■■□□□ 1.82
SNX11-209ENST00000581705 USP16Q9Y5T5 823 aa26.4■■□□□ 1.82
SNX11-209ENST00000581705 TBC1D2BQ9UPU7 963 aa26.39■■□□□ 1.82
SNX11-209ENST00000581705 ZNF330Q9Y3S2 320 aaPredicted RBP26.39■■□□□ 1.82
SNX11-209ENST00000581705 LAS1LQ9Y4W2 734 aaKnown RBP26.39■■□□□ 1.82
SNX11-209ENST00000581705 SNRPA1P09661 255 aaKnown RBP26.39■■□□□ 1.81
SNX11-209ENST00000581705 EXOSC9Q06265 439 aaKnown RBP26.39■■□□□ 1.81
SNX11-209ENST00000581705 ARFGEF1Q9Y6D6 1849 aa26.39■■□□□ 1.81
SNX11-209ENST00000581705 PRAMEF22A3QJZ6 481 aa26.37■■□□□ 1.81
SNX11-209ENST00000581705 TBC1D9BQ66K14 1250 aa26.37■■□□□ 1.81
SNX11-209ENST00000581705 BICDL1Q6ZP65 573 aa26.37■■□□□ 1.81
SNX11-209ENST00000581705 NPM2Q86SE8 214 aaKnown RBP26.37■■□□□ 1.81
SNX11-209ENST00000581705 ZNF526Q8TF50 670 aaPredicted RBP26.37■■□□□ 1.81
SNX11-209ENST00000581705 SCN7AQ01118 1682 aa26.36■■□□□ 1.81
SNX11-209ENST00000581705 CAMTA2O94983 1202 aa26.35■■□□□ 1.81
SNX11-209ENST00000581705 RRP1P56182 461 aaKnown RBP26.35■■□□□ 1.81
SNX11-209ENST00000581705 GOLGA6L2Q8N9W4 650 aaPredicted RBP26.35■■□□□ 1.81
SNX11-209ENST00000581705 TSPYL4Q9UJ04 414 aa26.35■■□□□ 1.81
SNX11-209ENST00000581705 RARSP54136 660 aaKnown RBP26.33■■□□□ 1.81
SNX11-209ENST00000581705 ERICH6BQ5W0A0 696 aa26.33■■□□□ 1.81
SNX11-209ENST00000581705 CARMIL3Q8ND23 1372 aa26.33■■□□□ 1.8
SNX11-209ENST00000581705 ALDH1L2Q3SY69 923 aa26.32■■□□□ 1.8
SNX11-209ENST00000581705 DZIP3Q86Y13 1208 aaKnown RBP26.32■■□□□ 1.8
SNX11-209ENST00000581705 MIS18AQ9NYP9 233 aa26.32■■□□□ 1.8
SNX11-209ENST00000581705 GTF3C3Q9Y5Q9 886 aa26.32■■□□□ 1.8
SNX11-209ENST00000581705 KDM3BQ7LBC6 1761 aa26.32■■□□□ 1.8
SNX11-209ENST00000581705 PIP4K2AP48426 406 aaPredicted RBP26.31■■□□□ 1.8
SNX11-209ENST00000581705 NBPF26B4DH59 902 aa26.3■■□□□ 1.8
SNX11-209ENST00000581705 NBPF10Q6P3W6 841 aaKnown RBP26.3■■□□□ 1.8
SNX11-209ENST00000581705 C2CD5Q86YS7 1000 aa26.3■■□□□ 1.8
SNX11-209ENST00000581705 NBPF15Q8N660 670 aa26.3■■□□□ 1.8
SNX11-209ENST00000581705 SETDB2Q96T68 719 aa26.3■■□□□ 1.8
SNX11-209ENST00000581705 H0YIN7 160 aa26.29■■□□□ 1.8
SNX11-209ENST00000581705 VAMP4O75379 141 aa26.29■■□□□ 1.8
SNX11-209ENST00000581705 BRPF1P55201 1214 aaPredicted RBP26.29■■□□□ 1.8
SNX11-209ENST00000581705 TWISTNBQ3B726 338 aaPredicted RBP26.29■■□□□ 1.8
SNX11-209ENST00000581705 C9orf131Q5VYM1 1079 aa26.29■■□□□ 1.8
SNX11-209ENST00000581705 PRR5LQ6MZQ0 368 aa26.29■■□□□ 1.8
SNX11-209ENST00000581705 BRIP1Q9BX63 1249 aa26.29■■□□□ 1.8
SNX11-209ENST00000581705 BCORQ6W2J9 1755 aa26.28■■□□□ 1.8
SNX11-209ENST00000581705 DLEC1Q9Y238 1755 aa26.28■■□□□ 1.8
SNX11-209ENST00000581705 CHMP4AQ9BY43 222 aa26.28■■□□□ 1.8
SNX11-209ENST00000581705 CLEC4GQ6UXB4 293 aa26.27■■□□□ 1.8
SNX11-209ENST00000581705 TTLL6Q8N841 843 aa26.27■■□□□ 1.8
SNX11-209ENST00000581705 KIF3CO14782 793 aa26.26■■□□□ 1.79
SNX11-209ENST00000581705 PDZRN3Q9UPQ7 1066 aa26.26■■□□□ 1.79
SNX11-209ENST00000581705 RGL2O15211 777 aa26.25■■□□□ 1.79
SNX11-209ENST00000581705 HOXB7P09629 217 aa26.25■■□□□ 1.79
SNX11-209ENST00000581705 PDE6BP35913 854 aa26.25■■□□□ 1.79
SNX11-209ENST00000581705 C8orf58Q8NAV2 365 aa26.25■■□□□ 1.79
SNX11-209ENST00000581705 ANKRD31Q8N7Z5 1873 aa26.25■■□□□ 1.79
SNX11-209ENST00000581705 EIF4A1P60842 406 aaKnown RBP26.24■■□□□ 1.79
SNX11-209ENST00000581705 CNBD1Q8NA66 436 aa26.24■■□□□ 1.79
SNX11-209ENST00000581705 ZNF652Q9Y2D9 606 aa26.24■■□□□ 1.79
SNX11-209ENST00000581705 CCDC24Q8N4L8 307 aa26.23■■□□□ 1.79
SNX11-209ENST00000581705 TSPYL6Q8N831 410 aa26.22■■□□□ 1.79
SNX11-209ENST00000581705 RNF181Q9P0P0 153 aa26.22■■□□□ 1.79
SNX11-209ENST00000581705 LAMB4A4D0S4 1761 aa26.22■■□□□ 1.79
SNX11-209ENST00000581705 KIF16BQ96L93 1317 aa26.22■■□□□ 1.79
SNX11-209ENST00000581705 BCAR3O75815 825 aa26.22■■□□□ 1.79
SNX11-209ENST00000581705 SSH1Q8WYL5 1049 aa26.22■■□□□ 1.79
SNX11-209ENST00000581705 SMC4Q9NTJ3 1288 aa26.21■■□□□ 1.79
SNX11-209ENST00000581705 NPHP1O15259 732 aa26.2■■□□□ 1.78
SNX11-209ENST00000581705 ST5P78524 1137 aa26.2■■□□□ 1.78
SNX11-209ENST00000581705 ZNF622Q969S3 477 aaKnown RBP eCLIP26.2■■□□□ 1.78
SNX11-209ENST00000581705 SBF1O95248 1867 aa26.19■■□□□ 1.78
SNX11-209ENST00000581705 MS4A1P11836 297 aa26.19■■□□□ 1.78
SNX11-209ENST00000581705 RASSF7Q02833 373 aa26.19■■□□□ 1.78
SNX11-209ENST00000581705 PDE3AQ14432 1141 aa26.19■■□□□ 1.78
SNX11-209ENST00000581705 CEP350Q5VT06 3117 aa26.19■■□□□ 1.78
SNX11-209ENST00000581705 CACNA1FO60840 1977 aa26.18■■□□□ 1.78
SNX11-209ENST00000581705 NBPF5PQ86XG9 351 aaPredicted RBP26.18■■□□□ 1.78
SNX11-209ENST00000581705 COL11A2P13942 1736 aaPredicted RBP26.18■■□□□ 1.78
SNX11-209ENST00000581705 IPO8O15397 1037 aaKnown RBP26.17■■□□□ 1.78
SNX11-209ENST00000581705 NMRK2Q9NPI5 230 aa26.17■■□□□ 1.78
SNX11-209ENST00000581705 NIP7Q9Y221 180 aaKnown RBP eCLIP26.17■■□□□ 1.78
SNX11-209ENST00000581705 LMNB1P20700 586 aa26.16■■□□□ 1.78
SNX11-209ENST00000581705 ELL2O00472 640 aaPredicted RBP26.15■■□□□ 1.78
SNX11-209ENST00000581705 SRGNP10124 158 aa26.15■■□□□ 1.78
SNX11-209ENST00000581705 PRELPP51888 382 aa26.15■■□□□ 1.78
SNX11-209ENST00000581705 HLFQ16534 295 aa26.15■■□□□ 1.78
SNX11-209ENST00000581705 STYK1Q6J9G0 422 aa26.15■■□□□ 1.78
SNX11-209ENST00000581705 ARHGAP45Q92619 1136 aa26.15■■□□□ 1.78
SNX11-209ENST00000581705 ZC3H4Q9UPT8 1303 aaKnown RBP26.15■■□□□ 1.78
SNX11-209ENST00000581705 NFKBIEO00221 500 aa26.14■■□□□ 1.78
SNX11-209ENST00000581705 ZKSCAN2Q63HK3 967 aa26.14■■□□□ 1.78
SNX11-209ENST00000581705 MRPL50Q8N5N7 158 aaKnown RBP26.14■■□□□ 1.78
SNX11-209ENST00000581705 KDM2BQ8NHM5 1336 aa26.14■■□□□ 1.77
SNX11-209ENST00000581705 TOMM70O94826 608 aa26.14■■□□□ 1.77
SNX11-209ENST00000581705 HSPA6P17066 643 aa26.14■■□□□ 1.77
SNX11-209ENST00000581705 KRT24Q2M2I5 525 aa26.14■■□□□ 1.77
SNX11-209ENST00000581705 CCDC30Q5VVM6 783 aa26.14■■□□□ 1.77
SNX11-209ENST00000581705 TPTE2Q6XPS3 522 aa26.14■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms