RNA–Protein interactions for RNA: ENST00000581660.5

CSNK1D-219, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-219ENST00000581660 CACNA1SQ13698 1873 aa19.01■□□□□ 0.63
CSNK1D-219ENST00000581660 RNMTO43148 476 aaKnown RBP19.01■□□□□ 0.63
CSNK1D-219ENST00000581660 CCDC24Q8N4L8 307 aa19.01■□□□□ 0.63
CSNK1D-219ENST00000581660 MASTLQ96GX5 879 aa19.01■□□□□ 0.63
CSNK1D-219ENST00000581660 TNRC18O15417 2968 aaPredicted RBP19■□□□□ 0.63
CSNK1D-219ENST00000581660 STARD3NLO95772 234 aa19■□□□□ 0.63
CSNK1D-219ENST00000581660 MAP1SQ66K74 1059 aaPredicted RBP19■□□□□ 0.63
CSNK1D-219ENST00000581660 CNBD1Q8NA66 436 aa19■□□□□ 0.63
CSNK1D-219ENST00000581660 ABT1Q9ULW3 272 aaKnown RBP19■□□□□ 0.63
CSNK1D-219ENST00000581660 CLEC11AQ9Y240 323 aa19■□□□□ 0.63
CSNK1D-219ENST00000581660 CCDC93Q567U6 631 aa18.99■□□□□ 0.63
CSNK1D-219ENST00000581660 IL13P35225 146 aa18.98■□□□□ 0.63
CSNK1D-219ENST00000581660 FKBP4Q02790 459 aaKnown RBP eCLIP18.98■□□□□ 0.63
CSNK1D-219ENST00000581660 CAPNS2Q96L46 248 aa18.98■□□□□ 0.63
CSNK1D-219ENST00000581660 DDX21Q9NR30 783 aaKnown RBP eCLIP18.98■□□□□ 0.636e-8■■□□□ 13.9
CSNK1D-219ENST00000581660 LTBP1Q14766 1721 aa18.97■□□□□ 0.63
CSNK1D-219ENST00000581660 ECE1P42892 770 aa18.97■□□□□ 0.63
CSNK1D-219ENST00000581660 ST5P78524 1137 aa18.97■□□□□ 0.63
CSNK1D-219ENST00000581660 BEGAINQ9BUH8 593 aa18.97■□□□□ 0.63
CSNK1D-219ENST00000581660 RNF123Q5XPI4 1314 aa18.97■□□□□ 0.63
CSNK1D-219ENST00000581660 FZD9O00144 591 aa18.96■□□□□ 0.63
CSNK1D-219ENST00000581660 IL6STP40189 918 aaPredicted RBP18.96■□□□□ 0.63
CSNK1D-219ENST00000581660 SETDB2Q96T68 719 aa18.96■□□□□ 0.63
CSNK1D-219ENST00000581660 GPC2Q8N158 579 aa18.95■□□□□ 0.62
CSNK1D-219ENST00000581660 ZNF277Q9NRM2 450 aaPredicted RBP18.95■□□□□ 0.62
CSNK1D-219ENST00000581660 TBC1D2BQ9UPU7 963 aa18.95■□□□□ 0.62
CSNK1D-219ENST00000581660 BCORQ6W2J9 1755 aa18.94■□□□□ 0.62
CSNK1D-219ENST00000581660 CAMTA2O94983 1202 aa18.94■□□□□ 0.62
CSNK1D-219ENST00000581660 GPR101Q96P66 508 aaPredicted RBP18.94■□□□□ 0.62
CSNK1D-219ENST00000581660 KLRG2A4D1S0 409 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-219ENST00000581660 RTKN2Q8IZC4 609 aa18.93■□□□□ 0.62
CSNK1D-219ENST00000581660 TEX13AQ9BXU3 409 aaPredicted RBP18.93■□□□□ 0.62
CSNK1D-219ENST00000581660 MCOLN1Q9GZU1 580 aa18.93■□□□□ 0.62
CSNK1D-219ENST00000581660 CA12O43570 354 aa18.92■□□□□ 0.62
CSNK1D-219ENST00000581660 NPR1P16066 1061 aa18.92■□□□□ 0.62
CSNK1D-219ENST00000581660 MAP2K2P36507 400 aa18.92■□□□□ 0.62
CSNK1D-219ENST00000581660 CYP4F22Q6NT55 531 aa18.92■□□□□ 0.62
CSNK1D-219ENST00000581660 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
CSNK1D-219ENST00000581660 SNED1Q8TER0 1413 aa18.91■□□□□ 0.62
CSNK1D-219ENST00000581660 TRPM7Q96QT4 1865 aa18.91■□□□□ 0.62
CSNK1D-219ENST00000581660 NPHP1O15259 732 aa18.91■□□□□ 0.62
CSNK1D-219ENST00000581660 IARSP41252 1262 aaKnown RBP18.91■□□□□ 0.62
CSNK1D-219ENST00000581660 TTC5Q8N0Z6 440 aa18.91■□□□□ 0.62
CSNK1D-219ENST00000581660 ZNF496Q96IT1 587 aaPredicted RBP18.91■□□□□ 0.62
CSNK1D-219ENST00000581660 TLL2Q9Y6L7 1015 aa18.9■□□□□ 0.62
CSNK1D-219ENST00000581660 MTHFSDQ2M296 383 aaKnown RBP18.89■□□□□ 0.61
CSNK1D-219ENST00000581660 CST9Q5W186 159 aa18.89■□□□□ 0.61
CSNK1D-219ENST00000581660 OLFM4Q6UX06 510 aa18.89■□□□□ 0.61
CSNK1D-219ENST00000581660 PAXIP1Q6ZW49 1069 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-219ENST00000581660 ZNF330Q9Y3S2 320 aaPredicted RBP18.89■□□□□ 0.61
CSNK1D-219ENST00000581660 FMR1Q06787 632 aaKnown RBP eCLIP18.88■□□□□ 0.61
CSNK1D-219ENST00000581660 MORC1Q86VD1 984 aa18.88■□□□□ 0.61
CSNK1D-219ENST00000581660 TSKSQ9UJT2 592 aa18.88■□□□□ 0.61
CSNK1D-219ENST00000581660 ZNF790Q6PG37 636 aa18.87■□□□□ 0.61
CSNK1D-219ENST00000581660 CLEC4GQ6UXB4 293 aa18.87■□□□□ 0.61
CSNK1D-219ENST00000581660 NBPF5PQ86XG9 351 aaPredicted RBP18.87■□□□□ 0.61
CSNK1D-219ENST00000581660 SYNE4Q8N205 404 aa18.87■□□□□ 0.61
CSNK1D-219ENST00000581660 CFAP44Q96MT7 982 aa18.87■□□□□ 0.61
CSNK1D-219ENST00000581660 PSMD1Q99460 953 aa18.87■□□□□ 0.61
CSNK1D-219ENST00000581660 CASP8AP2Q9UKL3 1982 aa18.87■□□□□ 0.61
CSNK1D-219ENST00000581660 SIPA1L3O60292 1781 aaPredicted RBP18.86■□□□□ 0.61
CSNK1D-219ENST00000581660 COL4A5P29400 1685 aa18.86■□□□□ 0.61
CSNK1D-219ENST00000581660 PANK3Q9H999 370 aa18.86■□□□□ 0.61
CSNK1D-219ENST00000581660 AOC2O75106 756 aa18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 A1BGP04217 495 aa18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 LMOD1P29536 600 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 SCNN1DP51172 638 aa18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 BRPF1P55201 1214 aaPredicted RBP18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 GRM1Q13255 1194 aa18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 NPM2Q86SE8 214 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 DZIP3Q86Y13 1208 aaKnown RBP18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 JDP2Q8WYK2 163 aa18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 HHIPL1Q96JK4 782 aa18.85■□□□□ 0.61
CSNK1D-219ENST00000581660 TRAF5O00463 557 aa18.84■□□□□ 0.61
CSNK1D-219ENST00000581660 RGL2O15211 777 aa18.84■□□□□ 0.61
CSNK1D-219ENST00000581660 USP50Q70EL3 339 aaPredicted RBP18.84■□□□□ 0.61
CSNK1D-219ENST00000581660 HMOX1P09601 288 aa18.83■□□□□ 0.6
CSNK1D-219ENST00000581660 ALDH1B1P30837 517 aa18.83■□□□□ 0.6
CSNK1D-219ENST00000581660 EPS15P42566 896 aa18.83■□□□□ 0.6
CSNK1D-219ENST00000581660 EIF6P56537 245 aaKnown RBP18.83■□□□□ 0.6
CSNK1D-219ENST00000581660 SAPCD2Q86UD0 394 aa18.83■□□□□ 0.6
CSNK1D-219ENST00000581660 DGKZQ13574 1117 aa18.82■□□□□ 0.6
CSNK1D-219ENST00000581660 TPTE2Q6XPS3 522 aa18.82■□□□□ 0.6
CSNK1D-219ENST00000581660 FMNL2Q96PY5 1086 aa18.82■□□□□ 0.6
CSNK1D-219ENST00000581660 POLR3GLQ9BT43 218 aa18.82■□□□□ 0.6
CSNK1D-219ENST00000581660 ZNF652Q9Y2D9 606 aa18.82■□□□□ 0.6
CSNK1D-219ENST00000581660 GJA3Q9Y6H8 435 aa18.82■□□□□ 0.6
CSNK1D-219ENST00000581660 TEFQ10587 303 aa18.81■□□□□ 0.6
CSNK1D-219ENST00000581660 CC2D2BQ6DHV5 1058 aa18.81■□□□□ 0.6
CSNK1D-219ENST00000581660 IL17REQ8NFR9 667 aa18.8■□□□□ 0.6
CSNK1D-219ENST00000581660 CRY2Q49AN0 593 aa18.79■□□□□ 0.6
CSNK1D-219ENST00000581660 GRIPAP1Q4V328 841 aa18.78■□□□□ 0.6
CSNK1D-219ENST00000581660 PRPF38BQ5VTL8 546 aaKnown RBP18.78■□□□□ 0.6
CSNK1D-219ENST00000581660 NIP7Q9Y221 180 aaKnown RBP eCLIP18.77■□□□□ 0.6
CSNK1D-219ENST00000581660 CEMIPQ8WUJ3 1361 aa18.77■□□□□ 0.6
CSNK1D-219ENST00000581660 GNAT3A8MTJ3 354 aa18.76■□□□□ 0.59
CSNK1D-219ENST00000581660 CELF2O95319 508 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-219ENST00000581660 CIAPIN1Q6FI81 312 aa18.76■□□□□ 0.59
CSNK1D-219ENST00000581660 ADARB2Q9NS39 739 aaKnown RBP18.76■□□□□ 0.59
CSNK1D-219ENST00000581660 LARGE2Q8N3Y3 721 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 301.3 ms