RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 SLC9A9Q8IVB4 645 aa8.62□□□□□ -1.03
SMCHD1-206ENST00000581631 TNFRSF25Q93038 417 aa8.62□□□□□ -1.03
SMCHD1-206ENST00000581631 GJA3Q9Y6H8 435 aa8.62□□□□□ -1.03
SMCHD1-206ENST00000581631 SLC30A3Q99726 388 aa8.61□□□□□ -1.03
SMCHD1-206ENST00000581631 PRDM6Q9NQX0 595 aa8.61□□□□□ -1.03
SMCHD1-206ENST00000581631 STARD13Q9Y3M8 1113 aa8.61□□□□□ -1.03
SMCHD1-206ENST00000581631 USP17L5A8MUK1 530 aa8.6□□□□□ -1.03
SMCHD1-206ENST00000581631 ZBTB7BO15156 539 aaPredicted RBP8.6□□□□□ -1.03
SMCHD1-206ENST00000581631 SFSWAPQ12872 951 aaKnown RBP8.6□□□□□ -1.03
SMCHD1-206ENST00000581631 TBCELQ5QJ74 424 aa8.6□□□□□ -1.03
SMCHD1-206ENST00000581631 LRRC69Q6ZNQ3 347 aa8.6□□□□□ -1.03
SMCHD1-206ENST00000581631 KIAA1024Q9UPX6 916 aa8.6□□□□□ -1.03
SMCHD1-206ENST00000581631 GATA4P43694 442 aa8.59□□□□□ -1.03
SMCHD1-206ENST00000581631 HIRAP54198 1017 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-206ENST00000581631 RSPO4Q2I0M5 234 aaPredicted RBP8.59□□□□□ -1.03
SMCHD1-206ENST00000581631 TNS4Q8IZW8 715 aa8.59□□□□□ -1.03
SMCHD1-206ENST00000581631 ADAMTS19Q8TE59 1207 aa8.59□□□□□ -1.03
SMCHD1-206ENST00000581631 POM121Q96HA1 1249 aa8.58□□□□□ -1.04
SMCHD1-206ENST00000581631 ALBP02768 609 aa8.57□□□□□ -1.04
SMCHD1-206ENST00000581631 NKAPLQ5M9Q1 402 aa8.57□□□□□ -1.04
SMCHD1-206ENST00000581631 PLEKHM2Q8IWE5 1019 aa8.57□□□□□ -1.04
SMCHD1-206ENST00000581631 DEPDC4Q8N2C3 294 aa8.57□□□□□ -1.04
SMCHD1-206ENST00000581631 SEMA6BQ9H3T3 888 aa8.57□□□□□ -1.04
SMCHD1-206ENST00000581631 SERTM1A2A2V5 107 aa8.56□□□□□ -1.04
SMCHD1-206ENST00000581631 NID1P14543 1247 aa8.56□□□□□ -1.04
SMCHD1-206ENST00000581631 KCNQ4P56696 695 aa8.56□□□□□ -1.04
SMCHD1-206ENST00000581631 CLDN10P78369 228 aa8.56□□□□□ -1.04
SMCHD1-206ENST00000581631 PSME1Q06323 249 aa8.56□□□□□ -1.04
SMCHD1-206ENST00000581631 MICALL1Q8N3F8 863 aa8.56□□□□□ -1.04
SMCHD1-206ENST00000581631 UCN2Q96RP3 112 aa8.56□□□□□ -1.04
SMCHD1-206ENST00000581631 M0R082 166 aa8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 DKK1O94907 266 aa8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 ALAS2P22557 587 aa8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 FOXD4L6Q3SYB3 417 aaPredicted RBP8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 C1orf53Q5VUE5 145 aa8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 FOXD4L3Q6VB84 417 aaPredicted RBP8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 C20orf204Q6ZNR8 217 aa8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 ZNF417Q8TAU3 575 aa8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 ZNF587Q96SQ5 575 aaPredicted RBP8.55□□□□□ -1.04
SMCHD1-206ENST00000581631 POM121CA8CG34 1229 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 M0R2N6 131 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 PSMA6P60900 246 aaKnown RBP8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 SPEM2Q0P670 501 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 C8orf86Q6ZUL3 223 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 TPCN2Q8NHX9 752 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 RHPN1Q8TCX5 695 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 HSH2DQ96JZ2 352 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 TSPAN10Q9H1Z9 355 aaPredicted RBP8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 TPSG1Q9NRR2 321 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 ZNF232Q9UNY5 417 aa8.54□□□□□ -1.04
SMCHD1-206ENST00000581631 SPDYE3A6NKU9 549 aa8.53□□□□□ -1.04
SMCHD1-206ENST00000581631 TYRO3Q06418 890 aa8.53□□□□□ -1.04
SMCHD1-206ENST00000581631 TRIM50Q86XT4 487 aa8.53□□□□□ -1.04
SMCHD1-206ENST00000581631 USP17L3A6NCW0 530 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 USP17L4A6NCW7 530 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 FAM229AH3BQW9 127 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 ADH7P40394 386 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 PRRT3Q5FWE3 981 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 CCDC102BQ68D86 513 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 USP17L2Q6R6M4 530 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 USP17L1Q7RTZ2 530 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 PHACTR1Q9C0D0 580 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 BRD7Q9NPI1 651 aa8.52□□□□□ -1.05
SMCHD1-206ENST00000581631 C21orf2O43822 256 aa8.51□□□□□ -1.05
SMCHD1-206ENST00000581631 RAB44Q7Z6P3 723 aaPredicted RBP8.51□□□□□ -1.05
SMCHD1-206ENST00000581631 SIX5Q8N196 739 aa8.51□□□□□ -1.05
SMCHD1-206ENST00000581631 ZNF280CQ8ND82 737 aa8.51□□□□□ -1.05
SMCHD1-206ENST00000581631 DYRK3O43781 588 aa8.5□□□□□ -1.05
SMCHD1-206ENST00000581631 ZMYM1Q5SVZ6 1142 aa8.5□□□□□ -1.05
SMCHD1-206ENST00000581631 ILDR2Q71H61 639 aa8.5□□□□□ -1.05
SMCHD1-206ENST00000581631 SUSD3Q96L08 255 aa8.5□□□□□ -1.05
SMCHD1-206ENST00000581631 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.49□□□□□ -1.05
SMCHD1-206ENST00000581631 ATP9BO43861 1147 aa8.49□□□□□ -1.05
SMCHD1-206ENST00000581631 ATP1A2P50993 1020 aa8.49□□□□□ -1.05
SMCHD1-206ENST00000581631 LARGE2Q8N3Y3 721 aa8.49□□□□□ -1.05
SMCHD1-206ENST00000581631 PSMG3-AS1Q96PY0 264 aa8.49□□□□□ -1.05
SMCHD1-206ENST00000581631 KRTAP9-2Q9BYQ4 174 aa8.49□□□□□ -1.05
SMCHD1-206ENST00000581631 KCNH4Q9UQ05 1017 aa8.49□□□□□ -1.05
SMCHD1-206ENST00000581631 HCN4Q9Y3Q4 1203 aa8.49□□□□□ -1.05
SMCHD1-206ENST00000581631 APBA3O96018 575 aa8.48□□□□□ -1.05
SMCHD1-206ENST00000581631 STAG2Q8N3U4 1231 aa8.48□□□□□ -1.05
SMCHD1-206ENST00000581631 OGFOD1Q8N543 542 aa8.48□□□□□ -1.05
SMCHD1-206ENST00000581631 CEP63Q96MT8 703 aa8.48□□□□□ -1.05
SMCHD1-206ENST00000581631 NEUROD4Q9HD90 331 aa8.48□□□□□ -1.05
SMCHD1-206ENST00000581631 GRIK4Q16099 956 aa8.47□□□□□ -1.05
SMCHD1-206ENST00000581631 ANKIB1Q9P2G1 1089 aa8.47□□□□□ -1.05
SMCHD1-206ENST00000581631 PALM3A6NDB9 673 aaPredicted RBP8.46□□□□□ -1.06
SMCHD1-206ENST00000581631 SFI1A8K8P3 1242 aa8.46□□□□□ -1.06
SMCHD1-206ENST00000581631 TRIM28Q13263 835 aaKnown RBP8.46□□□□□ -1.06
SMCHD1-206ENST00000581631 ADGRE1Q14246 886 aa8.46□□□□□ -1.06
SMCHD1-206ENST00000581631 WWC1Q8IX03 1113 aa8.46□□□□□ -1.06
SMCHD1-206ENST00000581631 TSEN2Q8NCE0 465 aaKnown RBP8.46□□□□□ -1.06
SMCHD1-206ENST00000581631 NACC1Q96RE7 527 aa8.46□□□□□ -1.06
SMCHD1-206ENST00000581631 C2orf49Q9BVC5 232 aaPredicted RBP8.46□□□□□ -1.06
SMCHD1-206ENST00000581631 SELPP16109 830 aa8.45□□□□□ -1.06
SMCHD1-206ENST00000581631 NEUROD1Q13562 356 aa8.45□□□□□ -1.06
SMCHD1-206ENST00000581631 MKRN1Q9UHC7 482 aaKnown RBP8.45□□□□□ -1.06
SMCHD1-206ENST00000581631 KRTAP9-6A0A140TA67 174 aa8.44□□□□□ -1.06
SMCHD1-206ENST00000581631 HDGFL1Q5TGJ6 251 aa8.44□□□□□ -1.06
SMCHD1-206ENST00000581631 BTLAQ7Z6A9 289 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms