RNA–Protein interactions for RNA: ENST00000581497.1

SRSF1-203, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 3

Gene SRSF1, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-203ENST00000581497 NRAPQ86VF7 1730 aa11.1□□□□□ -0.63
SRSF1-203ENST00000581497 J3QL48 77 aa11.1□□□□□ -0.63
SRSF1-203ENST00000581497 TRIM26Q12899 539 aaPredicted RBP11.1□□□□□ -0.63
SRSF1-203ENST00000581497 CARD11Q9BXL7 1154 aa11.1□□□□□ -0.63
SRSF1-203ENST00000581497 TONSLQ96HA7 1378 aa11.1□□□□□ -0.63
SRSF1-203ENST00000581497 TRPM1Q7Z4N2 1603 aa11.09□□□□□ -0.63
SRSF1-203ENST00000581497 QRICH2Q9H0J4 1663 aa11.09□□□□□ -0.63
SRSF1-203ENST00000581497 SNRPBP14678 240 aaKnown RBP11.09□□□□□ -0.63
SRSF1-203ENST00000581497 BAG6P46379 1132 aa11.09□□□□□ -0.63
SRSF1-203ENST00000581497 INSM1Q01101 510 aaPredicted RBP11.09□□□□□ -0.63
SRSF1-203ENST00000581497 DEFB132Q7Z7B7 95 aa11.09□□□□□ -0.63
SRSF1-203ENST00000581497 CRYBG1Q9Y4K1 1723 aa11.09□□□□□ -0.63
SRSF1-203ENST00000581497 BARGINQ6ZT62 677 aa11.08□□□□□ -0.64
SRSF1-203ENST00000581497 TRIM47Q96LD4 638 aa11.08□□□□□ -0.64
SRSF1-203ENST00000581497 SENP2Q9HC62 589 aa11.08□□□□□ -0.64
SRSF1-203ENST00000581497 USP35Q9P2H5 1018 aa11.08□□□□□ -0.64
SRSF1-203ENST00000581497 SSH2Q76I76 1423 aa11.08□□□□□ -0.64
SRSF1-203ENST00000581497 SBNO2Q9Y2G9 1366 aa11.07□□□□□ -0.64
SRSF1-203ENST00000581497 PHRF1Q9P1Y6 1649 aaKnown RBP11.07□□□□□ -0.64
SRSF1-203ENST00000581497 DXOO77932 396 aaKnown RBP11.07□□□□□ -0.64
SRSF1-203ENST00000581497 LARP1Q6PKG0 1096 aaKnown RBP11.07□□□□□ -0.64
SRSF1-203ENST00000581497 GPIHBP1Q8IV16 184 aa11.07□□□□□ -0.64
SRSF1-203ENST00000581497 TCP11L2Q8N4U5 519 aa11.07□□□□□ -0.64
SRSF1-203ENST00000581497 USB1Q9BQ65 265 aaKnown RBP11.07□□□□□ -0.64
SRSF1-203ENST00000581497 REPIN1Q9BWE0 567 aaKnown RBP11.07□□□□□ -0.64
SRSF1-203ENST00000581497 TTC21BQ7Z4L5 1316 aa11.07□□□□□ -0.64
SRSF1-203ENST00000581497 TTC21AQ8NDW8 1320 aa11.07□□□□□ -0.64
SRSF1-203ENST00000581497 ZBTB7CA1YPR0 619 aa11.06□□□□□ -0.64
SRSF1-203ENST00000581497 CD46P15529 392 aa11.06□□□□□ -0.64
SRSF1-203ENST00000581497 FAM182BQ5T319 152 aa11.06□□□□□ -0.64
SRSF1-203ENST00000581497 FAM196AQ6ZSG2 479 aa11.06□□□□□ -0.64
SRSF1-203ENST00000581497 KCNH5Q8NCM2 988 aa11.06□□□□□ -0.64
SRSF1-203ENST00000581497 THRAP3Q9Y2W1 955 aaKnown RBP11.06□□□□□ -0.64
SRSF1-203ENST00000581497 NRKQ7Z2Y5 1582 aa11.06□□□□□ -0.64
SRSF1-203ENST00000581497 AATKQ6ZMQ8 1374 aa11.05□□□□□ -0.64
SRSF1-203ENST00000581497 CAMTA1Q9Y6Y1 1673 aa11.05□□□□□ -0.64
SRSF1-203ENST00000581497 BRWD3Q6RI45 1802 aa11.05□□□□□ -0.64
SRSF1-203ENST00000581497 TERTO14746 1132 aaKnown RBP11.05□□□□□ -0.64
SRSF1-203ENST00000581497 PDE3BQ13370 1112 aa11.05□□□□□ -0.64
SRSF1-203ENST00000581497 HPS1Q92902 700 aa11.05□□□□□ -0.64
SRSF1-203ENST00000581497 KTN1Q86UP2 1357 aaKnown RBP11.04□□□□□ -0.64
SRSF1-203ENST00000581497 CPSF1Q10570 1443 aaKnown RBP11.04□□□□□ -0.64
SRSF1-203ENST00000581497 LCE2CQ5TA81 110 aa11.04□□□□□ -0.64
SRSF1-203ENST00000581497 THSD7AQ9UPZ6 1657 aa11.04□□□□□ -0.64
SRSF1-203ENST00000581497 SLIT3O75094 1523 aa11.04□□□□□ -0.64
SRSF1-203ENST00000581497 EP400Q96L91 3159 aa11.04□□□□□ -0.64
SRSF1-203ENST00000581497 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
SRSF1-203ENST00000581497 KDM4AO75164 1064 aa11.03□□□□□ -0.64
SRSF1-203ENST00000581497 PUS7Q96PZ0 661 aaKnown RBP11.03□□□□□ -0.64
SRSF1-203ENST00000581497 COL5A2P05997 1499 aaPredicted RBP11.03□□□□□ -0.64
SRSF1-203ENST00000581497 CRB1P82279 1406 aa11.02□□□□□ -0.64
SRSF1-203ENST00000581497 TRIM37O94972 964 aa11.02□□□□□ -0.65
SRSF1-203ENST00000581497 RC3H1Q5TC82 1133 aaKnown RBP11.02□□□□□ -0.65
SRSF1-203ENST00000581497 TOM1L2Q6ZVM7 507 aa11.02□□□□□ -0.65
SRSF1-203ENST00000581497 HDGFL2Q7Z4V5 671 aaPredicted RBP11.02□□□□□ -0.65
SRSF1-203ENST00000581497 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.65
SRSF1-203ENST00000581497 CCDC24Q8N4L8 307 aa11.02□□□□□ -0.65
SRSF1-203ENST00000581497 TMC1Q8TDI8 760 aa11.02□□□□□ -0.65
SRSF1-203ENST00000581497 KIFC2Q96AC6 838 aa11.02□□□□□ -0.65
SRSF1-203ENST00000581497 LMO7Q8WWI1 1683 aa11.01□□□□□ -0.65
SRSF1-203ENST00000581497 SKOR1P84550 965 aa11.01□□□□□ -0.65
SRSF1-203ENST00000581497 TERF2IPQ9NYB0 399 aa11.01□□□□□ -0.65
SRSF1-203ENST00000581497 DISP2A7MBM2 1401 aa11.01□□□□□ -0.65
SRSF1-203ENST00000581497 WNT7BP56706 349 aa11□□□□□ -0.65
SRSF1-203ENST00000581497 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11□□□□□ -0.65
SRSF1-203ENST00000581497 SLC12A5Q9H2X9 1139 aa11□□□□□ -0.65
SRSF1-203ENST00000581497 WDR17Q8IZU2 1322 aa11□□□□□ -0.65
SRSF1-203ENST00000581497 ST20-MTHFSA0A0A6YYL1 179 aa10.99□□□□□ -0.65
SRSF1-203ENST00000581497 APBA3O96018 575 aa10.99□□□□□ -0.65
SRSF1-203ENST00000581497 CSB-PGBD3P0DP91 1061 aa10.99□□□□□ -0.65
SRSF1-203ENST00000581497 USP46P62068 366 aa10.99□□□□□ -0.65
SRSF1-203ENST00000581497 HLA-CQ95604 372 aa10.99□□□□□ -0.65
SRSF1-203ENST00000581497 CDCA7Q9BWT1 371 aaPredicted RBP10.99□□□□□ -0.65
SRSF1-203ENST00000581497 USP31Q70CQ4 1352 aa10.99□□□□□ -0.65
SRSF1-203ENST00000581497 PIK3C2AO00443 1686 aa10.98□□□□□ -0.65
SRSF1-203ENST00000581497 EZH2Q15910 746 aaKnown RBP10.98□□□□□ -0.65
SRSF1-203ENST00000581497 DDB1Q16531 1140 aa10.98□□□□□ -0.65
SRSF1-203ENST00000581497 NME9Q86XW9 330 aa10.98□□□□□ -0.65
SRSF1-203ENST00000581497 CAMKK2Q96RR4 588 aa10.98□□□□□ -0.65
SRSF1-203ENST00000581497 TESK2Q96S53 571 aa10.98□□□□□ -0.65
SRSF1-203ENST00000581497 PARD3Q8TEW0 1356 aa10.98□□□□□ -0.65
SRSF1-203ENST00000581497 MAP2K5Q13163 448 aa10.97□□□□□ -0.65
SRSF1-203ENST00000581497 CARD10Q9BWT7 1032 aa10.97□□□□□ -0.65
SRSF1-203ENST00000581497 NINLQ9Y2I6 1382 aa10.97□□□□□ -0.65
SRSF1-203ENST00000581497 EDC4Q6P2E9 1401 aaKnown RBP10.97□□□□□ -0.65
SRSF1-203ENST00000581497 CD163L1Q9NR16 1453 aa10.97□□□□□ -0.65
SRSF1-203ENST00000581497 RGPD1P0DJD0 1748 aa10.96□□□□□ -0.65
SRSF1-203ENST00000581497 OVOS2A0A0G2JMS6 1433 aa10.96□□□□□ -0.65
SRSF1-203ENST00000581497 OVOS2A0A0J9YW53 1432 aa10.96□□□□□ -0.65
SRSF1-203ENST00000581497 OVOS2Q6IE36 1432 aa10.96□□□□□ -0.65
SRSF1-203ENST00000581497 HOXA2O43364 376 aa10.96□□□□□ -0.65
SRSF1-203ENST00000581497 AKAP12Q02952 1782 aa10.95□□□□□ -0.66
SRSF1-203ENST00000581497 NFAT5O94916 1531 aa10.95□□□□□ -0.66
SRSF1-203ENST00000581497 A0A1W2PP64 1363 aa10.95□□□□□ -0.66
SRSF1-203ENST00000581497 CCDC7Q96M83 1385 aa10.95□□□□□ -0.66
SRSF1-203ENST00000581497 ALDH1A1P00352 501 aa10.95□□□□□ -0.66
SRSF1-203ENST00000581497 R3HDM1Q15032 1099 aaKnown RBP10.95□□□□□ -0.66
SRSF1-203ENST00000581497 TIMELESSQ9UNS1 1208 aa10.95□□□□□ -0.66
SRSF1-203ENST00000581497 ABCC6O95255 1503 aa10.94□□□□□ -0.66
SRSF1-203ENST00000581497 EXOC5O00471 708 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms