RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 CNKSR1Q969H4 720 aa14.63□□□□□ -0.07
TOP3A-210ENST00000580713 ZNF330Q9Y3S2 320 aaPredicted RBP14.63□□□□□ -0.07
TOP3A-210ENST00000580713 ITGBL1O95965 494 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-210ENST00000580713 MAP2K1Q02750 393 aaPredicted RBP14.62□□□□□ -0.07
TOP3A-210ENST00000580713 SOGA3Q5TF21 947 aa14.62□□□□□ -0.07
TOP3A-210ENST00000580713 PRR5LQ6MZQ0 368 aa14.62□□□□□ -0.07
TOP3A-210ENST00000580713 PCDH10Q9P2E7 1040 aa14.62□□□□□ -0.07
TOP3A-210ENST00000580713 DICER1Q9UPY3 1922 aaKnown RBP14.61□□□□□ -0.07
TOP3A-210ENST00000580713 RNMTO43148 476 aaKnown RBP14.61□□□□□ -0.07
TOP3A-210ENST00000580713 STARD3NLO95772 234 aa14.61□□□□□ -0.07
TOP3A-210ENST00000580713 PRPF40BQ6NWY9 871 aaKnown RBP14.61□□□□□ -0.07
TOP3A-210ENST00000580713 L3MBTL3Q96JM7 780 aaPredicted RBP14.61□□□□□ -0.07
TOP3A-210ENST00000580713 HACL1Q9UJ83 578 aa14.61□□□□□ -0.07
TOP3A-210ENST00000580713 ABT1Q9ULW3 272 aaKnown RBP14.61□□□□□ -0.07
TOP3A-210ENST00000580713 STYK1Q6J9G0 422 aa14.6□□□□□ -0.07
TOP3A-210ENST00000580713 VSIG10Q8N0Z9 540 aa14.6□□□□□ -0.07
TOP3A-210ENST00000580713 WDR33Q9C0J8 1336 aaKnown RBP14.6□□□□□ -0.07
TOP3A-210ENST00000580713 FER1L6Q2WGJ9 1857 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 RASSF10A6NK89 507 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 EPHX2P34913 555 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 EIF5P55010 431 aaKnown RBP14.59□□□□□ -0.07
TOP3A-210ENST00000580713 ST5P78524 1137 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 PAXIP1Q6ZW49 1069 aaPredicted RBP14.59□□□□□ -0.07
TOP3A-210ENST00000580713 NPM2Q86SE8 214 aaKnown RBP14.59□□□□□ -0.07
TOP3A-210ENST00000580713 MORC1Q86VD1 984 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 CNTROBQ8N137 903 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 CNBD1Q8NA66 436 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 CFAP44Q96MT7 982 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 BEGAINQ9BUH8 593 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 TBC1D2BQ9UPU7 963 aa14.59□□□□□ -0.07
TOP3A-210ENST00000580713 SCN11AQ9UI33 1791 aa14.58□□□□□ -0.08
TOP3A-210ENST00000580713 MAP1SQ66K74 1059 aaPredicted RBP14.58□□□□□ -0.08
TOP3A-210ENST00000580713 TTC5Q8N0Z6 440 aa14.58□□□□□ -0.08
TOP3A-210ENST00000580713 MASTLQ96GX5 879 aa14.58□□□□□ -0.08
TOP3A-210ENST00000580713 SETDB2Q96T68 719 aa14.58□□□□□ -0.08
TOP3A-210ENST00000580713 SRGNP10124 158 aa14.57□□□□□ -0.08
TOP3A-210ENST00000580713 GRM1Q13255 1194 aa14.57□□□□□ -0.08
TOP3A-210ENST00000580713 CCDC93Q567U6 631 aa14.57□□□□□ -0.08
TOP3A-210ENST00000580713 ZNF277Q9NRM2 450 aaPredicted RBP14.57□□□□□ -0.08
TOP3A-210ENST00000580713 ZNF541Q9H0D2 1346 aa14.57□□□□□ -0.08
TOP3A-210ENST00000580713 ANKRD31Q8N7Z5 1873 aa14.57□□□□□ -0.08
TOP3A-210ENST00000580713 IL13P35225 146 aa14.56□□□□□ -0.08
TOP3A-210ENST00000580713 PNMA8AQ86V59 439 aaPredicted RBP14.56□□□□□ -0.08
TOP3A-210ENST00000580713 VIRMAQ69YN4 1812 aaKnown RBP14.56□□□□□ -0.08
TOP3A-210ENST00000580713 SCN4AP35499 1836 aa14.55□□□□□ -0.08
TOP3A-210ENST00000580713 SLX4Q8IY92 1834 aa14.55□□□□□ -0.08
TOP3A-210ENST00000580713 SPDYE4A6NLX3 237 aa14.55□□□□□ -0.08
TOP3A-210ENST00000580713 PANK3Q9H999 370 aa14.55□□□□□ -0.08
TOP3A-210ENST00000580713 RNF123Q5XPI4 1314 aa14.55□□□□□ -0.08
TOP3A-210ENST00000580713 COL11A2P13942 1736 aaPredicted RBP14.55□□□□□ -0.08
TOP3A-210ENST00000580713 HMOX1P09601 288 aa14.54□□□□□ -0.08
TOP3A-210ENST00000580713 RGS19P49795 217 aa14.54□□□□□ -0.08
TOP3A-210ENST00000580713 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
TOP3A-210ENST00000580713 CAPNS2Q96L46 248 aa14.54□□□□□ -0.08
TOP3A-210ENST00000580713 TEX13AQ9BXU3 409 aaPredicted RBP14.54□□□□□ -0.08
TOP3A-210ENST00000580713 MRC1P22897 1456 aa14.53□□□□□ -0.08
TOP3A-210ENST00000580713 ECE1P42892 770 aa14.53□□□□□ -0.08
TOP3A-210ENST00000580713 CACNA1SQ13698 1873 aa14.52□□□□□ -0.08
TOP3A-210ENST00000580713 CAMTA2O94983 1202 aa14.52□□□□□ -0.09
TOP3A-210ENST00000580713 NPR1P16066 1061 aa14.52□□□□□ -0.09
TOP3A-210ENST00000580713 IL6STP40189 918 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-210ENST00000580713 MTHFSDQ2M296 383 aaKnown RBP14.52□□□□□ -0.09
TOP3A-210ENST00000580713 CYP4F22Q6NT55 531 aa14.52□□□□□ -0.09
TOP3A-210ENST00000580713 NBPF5PQ86XG9 351 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-210ENST00000580713 C7orf43Q8WVR3 580 aa14.52□□□□□ -0.09
TOP3A-210ENST00000580713 ZNF496Q96IT1 587 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-210ENST00000580713 GPR101Q96P66 508 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-210ENST00000580713 DDX21Q9NR30 783 aaKnown RBP eCLIP14.52□□□□□ -0.09
TOP3A-210ENST00000580713 TSKSQ9UJT2 592 aa14.52□□□□□ -0.09
TOP3A-210ENST00000580713 A1BGP04217 495 aa14.51□□□□□ -0.09
TOP3A-210ENST00000580713 TEFQ10587 303 aa14.51□□□□□ -0.09
TOP3A-210ENST00000580713 OLFM4Q6UX06 510 aa14.51□□□□□ -0.09
TOP3A-210ENST00000580713 DZIP3Q86Y13 1208 aaKnown RBP14.51□□□□□ -0.09
TOP3A-210ENST00000580713 REM2Q8IYK8 340 aaPredicted RBP14.51□□□□□ -0.09
TOP3A-210ENST00000580713 RTKN2Q8IZC4 609 aa14.51□□□□□ -0.09
TOP3A-210ENST00000580713 GJA3Q9Y6H8 435 aa14.51□□□□□ -0.09
TOP3A-210ENST00000580713 HEG1Q9ULI3 1381 aa14.5□□□□□ -0.09
TOP3A-210ENST00000580713 LMOD1P29536 600 aaPredicted RBP14.5□□□□□ -0.09
TOP3A-210ENST00000580713 IARSP41252 1262 aaKnown RBP14.5□□□□□ -0.09
TOP3A-210ENST00000580713 GPC2Q8N158 579 aa14.5□□□□□ -0.09
TOP3A-210ENST00000580713 SYNE4Q8N205 404 aa14.5□□□□□ -0.09
TOP3A-210ENST00000580713 JDP2Q8WYK2 163 aa14.5□□□□□ -0.09
TOP3A-210ENST00000580713 FZD9O00144 591 aa14.49□□□□□ -0.09
TOP3A-210ENST00000580713 EIF6P56537 245 aaKnown RBP14.49□□□□□ -0.09
TOP3A-210ENST00000580713 FMR1Q06787 632 aaKnown RBP eCLIP14.49□□□□□ -0.09
TOP3A-210ENST00000580713 ZNF790Q6PG37 636 aa14.49□□□□□ -0.09
TOP3A-210ENST00000580713 POTEHQ6S545 545 aa14.49□□□□□ -0.09
TOP3A-210ENST00000580713 FMNL2Q96PY5 1086 aa14.48□□□□□ -0.09
TOP3A-210ENST00000580713 MCOLN1Q9GZU1 580 aa14.48□□□□□ -0.09
TOP3A-210ENST00000580713 KNSTRNQ9Y448 316 aa14.48□□□□□ -0.09
TOP3A-210ENST00000580713 SCN7AQ01118 1682 aa14.48□□□□□ -0.09
TOP3A-210ENST00000580713 SPDYE2BA6NHP3 402 aa14.47□□□□□ -0.09
TOP3A-210ENST00000580713 FAM177BA6PVY3 158 aa14.47□□□□□ -0.09
TOP3A-210ENST00000580713 AOC2O75106 756 aa14.47□□□□□ -0.09
TOP3A-210ENST00000580713 SPDYE6P0CI01 402 aa14.47□□□□□ -0.09
TOP3A-210ENST00000580713 SPDYE2Q495Y8 402 aa14.47□□□□□ -0.09
TOP3A-210ENST00000580713 ZNF652Q9Y2D9 606 aa14.47□□□□□ -0.09
TOP3A-210ENST00000580713 ADAMTSL1Q8N6G6 1762 aa14.47□□□□□ -0.09
TOP3A-210ENST00000580713 TRAF5O00463 557 aa14.46□□□□□ -0.09
TOP3A-210ENST00000580713 ALDH1B1P30837 517 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 139 ms