RNA–Protein interactions for RNA: ENST00000580565.1

CSNK1D-214, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-214ENST00000580565 ZNF219Q9P2Y4 722 aaPredicted RBP23.14■■□□□ 1.29
CSNK1D-214ENST00000580565 MAPK8IP3Q9UPT6 1336 aa23.13■■□□□ 1.29
CSNK1D-214ENST00000580565 SRGNP10124 158 aa23.13■■□□□ 1.29
CSNK1D-214ENST00000580565 APLP1P51693 650 aa23.13■■□□□ 1.29
CSNK1D-214ENST00000580565 STYK1Q6J9G0 422 aa23.13■■□□□ 1.29
CSNK1D-214ENST00000580565 CNKSR1Q969H4 720 aa23.13■■□□□ 1.29
CSNK1D-214ENST00000580565 EIF4A1P60842 406 aaKnown RBP23.12■■□□□ 1.29
CSNK1D-214ENST00000580565 NIP7Q9Y221 180 aaKnown RBP eCLIP23.12■■□□□ 1.29
CSNK1D-214ENST00000580565 DLEC1Q9Y238 1755 aa23.12■■□□□ 1.29
CSNK1D-214ENST00000580565 MASTLQ96GX5 879 aa23.11■■□□□ 1.29
CSNK1D-214ENST00000580565 GLTPD2A6NH11 291 aa23.1■■□□□ 1.29
CSNK1D-214ENST00000580565 HLFQ16534 295 aa23.1■■□□□ 1.29
CSNK1D-214ENST00000580565 TPTE2Q6XPS3 522 aa23.1■■□□□ 1.29
CSNK1D-214ENST00000580565 FSTL1Q12841 308 aa23.09■■□□□ 1.29
CSNK1D-214ENST00000580565 PRPF40BQ6NWY9 871 aaKnown RBP23.09■■□□□ 1.29
CSNK1D-214ENST00000580565 ANKRD31Q8N7Z5 1873 aa23.09■■□□□ 1.29
CSNK1D-214ENST00000580565 DDX10Q13206 875 aaKnown RBP23.08■■□□□ 1.29
CSNK1D-214ENST00000580565 NGEFQ8N5V2 710 aa23.08■■□□□ 1.29
CSNK1D-214ENST00000580565 BCORQ6W2J9 1755 aa23.07■■□□□ 1.28
CSNK1D-214ENST00000580565 KLRG2A4D1S0 409 aaPredicted RBP23.07■■□□□ 1.28
CSNK1D-214ENST00000580565 RRP7AQ9Y3A4 280 aaKnown RBP23.07■■□□□ 1.28
CSNK1D-214ENST00000580565 SBF1O95248 1867 aa23.07■■□□□ 1.28
CSNK1D-214ENST00000580565 FAM177BA6PVY3 158 aa23.06■■□□□ 1.28
CSNK1D-214ENST00000580565 ERVV-1B6SEH8 477 aa23.06■■□□□ 1.28
CSNK1D-214ENST00000580565 VEGFAP15692 232 aaPredicted RBP23.06■■□□□ 1.28
CSNK1D-214ENST00000580565 NPR1P16066 1061 aa23.06■■□□□ 1.28
CSNK1D-214ENST00000580565 RIPK4P57078 832 aa23.06■■□□□ 1.28
CSNK1D-214ENST00000580565 SOGA3Q5TF21 947 aa23.06■■□□□ 1.28
CSNK1D-214ENST00000580565 TAOK3Q9H2K8 898 aa23.06■■□□□ 1.28
CSNK1D-214ENST00000580565 LTBP3Q9NS15 1303 aa23.06■■□□□ 1.28
CSNK1D-214ENST00000580565 ERFEQ4G0M1 354 aa23.05■■□□□ 1.28
CSNK1D-214ENST00000580565 MYL6BP14649 208 aa23.04■■□□□ 1.28
CSNK1D-214ENST00000580565 DPY19L2Q6NUT2 758 aa23.04■■□□□ 1.28
CSNK1D-214ENST00000580565 DNAJC5GQ8N7S2 189 aa23.04■■□□□ 1.28
CSNK1D-214ENST00000580565 C7orf43Q8WVR3 580 aa23.04■■□□□ 1.28
CSNK1D-214ENST00000580565 TSPYL4Q9UJ04 414 aa23.04■■□□□ 1.28
CSNK1D-214ENST00000580565 COL11A2P13942 1736 aaPredicted RBP23.04■■□□□ 1.28
CSNK1D-214ENST00000580565 GTF2E1P29083 439 aaPredicted RBP23.03■■□□□ 1.28
CSNK1D-214ENST00000580565 KIF6Q6ZMV9 814 aa23.03■■□□□ 1.28
CSNK1D-214ENST00000580565 TTLL7Q6ZT98 887 aa23.03■■□□□ 1.28
CSNK1D-214ENST00000580565 MAP3K15Q6ZN16 1313 aa23.03■■□□□ 1.28
CSNK1D-214ENST00000580565 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
CSNK1D-214ENST00000580565 SMC1BQ8NDV3 1235 aa23.02■■□□□ 1.28
CSNK1D-214ENST00000580565 MYBBP1AQ9BQG0 1328 aaKnown RBP23.02■■□□□ 1.28
CSNK1D-214ENST00000580565 NYXQ9GZU5 481 aa23.01■■□□□ 1.27
CSNK1D-214ENST00000580565 KDM3BQ7LBC6 1761 aa23■■□□□ 1.27
CSNK1D-214ENST00000580565 LMOD3Q0VAK6 560 aa23■■□□□ 1.27
CSNK1D-214ENST00000580565 BABAM1Q9NWV8 329 aa23■■□□□ 1.27
CSNK1D-214ENST00000580565 ERBB4Q15303 1308 aa23■■□□□ 1.27
CSNK1D-214ENST00000580565 TNRC6CQ9HCJ0 1690 aaKnown RBP23■■□□□ 1.27
CSNK1D-214ENST00000580565 POTECB2RU33 542 aa22.99■■□□□ 1.27
CSNK1D-214ENST00000580565 CCDC93Q567U6 631 aa22.99■■□□□ 1.27
CSNK1D-214ENST00000580565 ZBTB3Q9H5J0 574 aa22.99■■□□□ 1.27
CSNK1D-214ENST00000580565 DLG5Q8TDM6 1919 aa22.99■■□□□ 1.27
CSNK1D-214ENST00000580565 ALDH1B1P30837 517 aa22.98■■□□□ 1.27
CSNK1D-214ENST00000580565 NUTM1Q86Y26 1132 aa22.98■■□□□ 1.27
CSNK1D-214ENST00000580565 LAMB4A4D0S4 1761 aa22.98■■□□□ 1.27
CSNK1D-214ENST00000580565 SLX4Q8IY92 1834 aa22.98■■□□□ 1.27
CSNK1D-214ENST00000580565 GPTP24298 496 aa22.97■■□□□ 1.27
CSNK1D-214ENST00000580565 HTRA3P83110 453 aa22.97■■□□□ 1.27
CSNK1D-214ENST00000580565 CCDC146Q8IYE0 955 aa22.97■■□□□ 1.27
CSNK1D-214ENST00000580565 EIF2S2P20042 333 aaKnown RBP22.96■■□□□ 1.27
CSNK1D-214ENST00000580565 CRY2Q49AN0 593 aa22.96■■□□□ 1.27
CSNK1D-214ENST00000580565 ZNF34Q8IZ26 560 aa22.96■■□□□ 1.27
CSNK1D-214ENST00000580565 FKBP4Q02790 459 aaKnown RBP eCLIP22.95■■□□□ 1.265e-7■□□□□ 8.6
CSNK1D-214ENST00000580565 PDIA6Q15084 440 aa22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 NEUROD2Q15784 382 aa22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 SUSD4Q5VX71 490 aa22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 OLFM4Q6UX06 510 aa22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 GIGYF2Q6Y7W6 1299 aaKnown RBP22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 UBN2Q6ZU65 1347 aa22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 LRP10Q7Z4F1 713 aa22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 RTKN2Q8IZC4 609 aa22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 ABCC12Q96J65 1359 aa22.95■■□□□ 1.26
CSNK1D-214ENST00000580565 FER1L6Q2WGJ9 1857 aa22.94■■□□□ 1.26
CSNK1D-214ENST00000580565 TIAM2Q8IVF5 1701 aa22.94■■□□□ 1.26
CSNK1D-214ENST00000580565 DDNO94850 711 aaPredicted RBP22.94■■□□□ 1.26
CSNK1D-214ENST00000580565 WDR43Q15061 677 aaKnown RBP eCLIP22.94■■□□□ 1.26
CSNK1D-214ENST00000580565 RUNDC1Q96C34 613 aa22.94■■□□□ 1.26
CSNK1D-214ENST00000580565 IBTKQ9P2D0 1353 aaPredicted RBP22.93■■□□□ 1.26
CSNK1D-214ENST00000580565 ZNF277Q9NRM2 450 aaPredicted RBP22.93■■□□□ 1.26
CSNK1D-214ENST00000580565 PROSER3Q2NL68 480 aa22.92■■□□□ 1.26
CSNK1D-214ENST00000580565 KLRG1Q96E93 195 aa22.92■■□□□ 1.26
CSNK1D-214ENST00000580565 ADAMTS8Q9UP79 889 aa22.92■■□□□ 1.26
CSNK1D-214ENST00000580565 CHL1O00533 1208 aa22.91■■□□□ 1.26
CSNK1D-214ENST00000580565 ANXA1P04083 346 aa22.91■■□□□ 1.26
CSNK1D-214ENST00000580565 HOXA10P31260 410 aaPredicted RBP22.91■■□□□ 1.26
CSNK1D-214ENST00000580565 RPGRQ92834 1020 aaKnown RBP22.91■■□□□ 1.26
CSNK1D-214ENST00000580565 TRIM35Q9UPQ4 493 aa22.91■■□□□ 1.26
CSNK1D-214ENST00000580565 NTSR2O95665 410 aa22.9■■□□□ 1.26
CSNK1D-214ENST00000580565 PARP10Q53GL7 1025 aa22.9■■□□□ 1.26
CSNK1D-214ENST00000580565 PPP1R42Q7Z4L9 355 aa22.9■■□□□ 1.26
CSNK1D-214ENST00000580565 WDR90Q96KV7 1748 aa22.9■■□□□ 1.26
CSNK1D-214ENST00000580565 ARFGEF2Q9Y6D5 1785 aa22.89■■□□□ 1.26
CSNK1D-214ENST00000580565 SYNE4Q8N205 404 aa22.89■■□□□ 1.25
CSNK1D-214ENST00000580565 NECTIN2Q92692 538 aa22.89■■□□□ 1.25
CSNK1D-214ENST00000580565 RIC1Q4ADV7 1423 aa22.89■■□□□ 1.25
CSNK1D-214ENST00000580565 CCDC88AQ3V6T2 1871 aa22.88■■□□□ 1.25
CSNK1D-214ENST00000580565 CC2D2BQ6DHV5 1058 aa22.88■■□□□ 1.25
CSNK1D-214ENST00000580565 COPS6Q7L5N1 327 aa22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms