RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 PHAXQ9H814 394 aaKnown RBP18.17■□□□□ 0.5
SKA2-205ENST00000580541 RREB1Q92766 1687 aa18.17■□□□□ 0.5
SKA2-205ENST00000580541 HSP90AB3PQ58FF7 597 aa18.16■□□□□ 0.5
SKA2-205ENST00000580541 CLEC4GQ6UXB4 293 aa18.16■□□□□ 0.5
SKA2-205ENST00000580541 LRP10Q7Z4F1 713 aa18.16■□□□□ 0.5
SKA2-205ENST00000580541 NARFQ9UHQ1 456 aa18.16■□□□□ 0.5
SKA2-205ENST00000580541 NEXNQ0ZGT2 675 aa18.15■□□□□ 0.5
SKA2-205ENST00000580541 ZNF827Q17R98 1081 aa18.15■□□□□ 0.5
SKA2-205ENST00000580541 TBC1D2BQ9UPU7 963 aa18.15■□□□□ 0.5
SKA2-205ENST00000580541 MAP3K15Q6ZN16 1313 aa18.15■□□□□ 0.5
SKA2-205ENST00000580541 ATF7IPQ6VMQ6 1270 aa18.14■□□□□ 0.49
SKA2-205ENST00000580541 G2E3Q7L622 706 aa18.14■□□□□ 0.49
SKA2-205ENST00000580541 NUP188Q5SRE5 1749 aa18.13■□□□□ 0.49
SKA2-205ENST00000580541 PI4KAP2A4QPH2 592 aa18.13■□□□□ 0.49
SKA2-205ENST00000580541 TTLL7Q6ZT98 887 aa18.13■□□□□ 0.49
SKA2-205ENST00000580541 PI4KAP1Q8N8J0 262 aa18.13■□□□□ 0.49
SKA2-205ENST00000580541 SLC16A10Q8TF71 515 aa18.13■□□□□ 0.49
SKA2-205ENST00000580541 UBR3Q6ZT12 1888 aa18.12■□□□□ 0.49
SKA2-205ENST00000580541 GIGYF2Q6Y7W6 1299 aaKnown RBP18.12■□□□□ 0.49
SKA2-205ENST00000580541 FTSJ3Q8IY81 847 aaKnown RBP18.12■□□□□ 0.49
SKA2-205ENST00000580541 NLGN1Q8N2Q7 840 aa18.12■□□□□ 0.49
SKA2-205ENST00000580541 DNAAF4Q8WXU2 420 aa18.12■□□□□ 0.49
SKA2-205ENST00000580541 ANO8Q9HCE9 1232 aaPredicted RBP18.12■□□□□ 0.49
SKA2-205ENST00000580541 MAP3K2Q9Y2U5 619 aa18.12■□□□□ 0.49
SKA2-205ENST00000580541 COL23A1Q86Y22 540 aaPredicted RBP18.11■□□□□ 0.49
SKA2-205ENST00000580541 ZBTB3Q9H5J0 574 aa18.11■□□□□ 0.49
SKA2-205ENST00000580541 PNPLA7Q6ZV29 1317 aa18.1■□□□□ 0.49
SKA2-205ENST00000580541 USP42Q9H9J4 1324 aaKnown RBP18.1■□□□□ 0.49
SKA2-205ENST00000580541 CAMTA2O94983 1202 aa18.1■□□□□ 0.49
SKA2-205ENST00000580541 TCIRG1Q13488 830 aa18.1■□□□□ 0.49
SKA2-205ENST00000580541 PDE3AQ14432 1141 aa18.1■□□□□ 0.49
SKA2-205ENST00000580541 USPL1Q5W0Q7 1092 aa18.1■□□□□ 0.49
SKA2-205ENST00000580541 METTL22Q9BUU2 404 aaPredicted RBP18.1■□□□□ 0.49
SKA2-205ENST00000580541 CCT4P50991 539 aaKnown RBP18.09■□□□□ 0.49
SKA2-205ENST00000580541 SLC4A10Q6U841 1118 aa18.09■□□□□ 0.49
SKA2-205ENST00000580541 DZIP1LQ8IYY4 767 aaKnown RBP18.09■□□□□ 0.49
SKA2-205ENST00000580541 CHMP4BQ9H444 224 aaKnown RBP18.09■□□□□ 0.49
SKA2-205ENST00000580541 SUPT16HQ9Y5B9 1047 aaKnown RBP18.09■□□□□ 0.49
SKA2-205ENST00000580541 SETDB2Q96T68 719 aa18.08■□□□□ 0.48
SKA2-205ENST00000580541 QSER1Q2KHR3 1735 aa18.08■□□□□ 0.48
SKA2-205ENST00000580541 TRIM27P14373 513 aa18.07■□□□□ 0.48
SKA2-205ENST00000580541 RRP1P56182 461 aaKnown RBP18.07■□□□□ 0.48
SKA2-205ENST00000580541 TRIM28Q13263 835 aaKnown RBP18.07■□□□□ 0.48
SKA2-205ENST00000580541 R3HDM1Q15032 1099 aaKnown RBP18.07■□□□□ 0.48
SKA2-205ENST00000580541 PARP10Q53GL7 1025 aa18.07■□□□□ 0.48
SKA2-205ENST00000580541 AMIGO3Q86WK7 504 aa18.07■□□□□ 0.48
SKA2-205ENST00000580541 LINS1Q8NG48 757 aa18.07■□□□□ 0.48
SKA2-205ENST00000580541 SRCIN1Q9C0H9 1055 aa18.07■□□□□ 0.48
SKA2-205ENST00000580541 HDAC5Q9UQL6 1122 aa18.07■□□□□ 0.48
SKA2-205ENST00000580541 F6X3S4 739 aa18.06■□□□□ 0.48
SKA2-205ENST00000580541 ALDH1L1O75891 902 aa18.06■□□□□ 0.48
SKA2-205ENST00000580541 GYS1P13807 737 aa18.06■□□□□ 0.48
SKA2-205ENST00000580541 HLFQ16534 295 aa18.06■□□□□ 0.48
SKA2-205ENST00000580541 SMIM5Q71RC9 77 aa18.06■□□□□ 0.48
SKA2-205ENST00000580541 CCDC191Q8NCU4 936 aa18.06■□□□□ 0.48
SKA2-205ENST00000580541 MYD88Q99836 296 aa18.06■□□□□ 0.48
SKA2-205ENST00000580541 SRP68Q9UHB9 627 aaKnown RBP18.06■□□□□ 0.48
SKA2-205ENST00000580541 NIP7Q9Y221 180 aaKnown RBP eCLIP18.06■□□□□ 0.48
SKA2-205ENST00000580541 ADCY9O60503 1353 aa18.05■□□□□ 0.48
SKA2-205ENST00000580541 HSP90B1P14625 803 aaKnown RBP18.05■□□□□ 0.48
SKA2-205ENST00000580541 PPP1R42Q7Z4L9 355 aa18.05■□□□□ 0.48
SKA2-205ENST00000580541 CLUAP1Q96AJ1 413 aa18.05■□□□□ 0.48
SKA2-205ENST00000580541 RNF123Q5XPI4 1314 aa18.04■□□□□ 0.48
SKA2-205ENST00000580541 PLIN1O60240 522 aa18.04■□□□□ 0.48
SKA2-205ENST00000580541 INTS3Q68E01 1043 aaKnown RBP18.04■□□□□ 0.48
SKA2-205ENST00000580541 ZNF34Q8IZ26 560 aa18.04■□□□□ 0.48
SKA2-205ENST00000580541 NYXQ9GZU5 481 aa18.04■□□□□ 0.48
SKA2-205ENST00000580541 CWC25Q9NXE8 425 aaPredicted RBP18.04■□□□□ 0.48
SKA2-205ENST00000580541 ABCC4O15439 1325 aa18.03■□□□□ 0.48
SKA2-205ENST00000580541 NUP98P52948 1817 aa18.03■□□□□ 0.48
SKA2-205ENST00000580541 BEND3Q5T5X7 828 aa18.03■□□□□ 0.48
SKA2-205ENST00000580541 ISCA1Q9BUE6 129 aa18.03■□□□□ 0.48
SKA2-205ENST00000580541 ATP10DQ9P241 1426 aa18.03■□□□□ 0.48
SKA2-205ENST00000580541 PXDNLA1KZ92 1463 aa18.02■□□□□ 0.48
SKA2-205ENST00000580541 ATP5J2-PTCD1G3V325 749 aa18.02■□□□□ 0.48
SKA2-205ENST00000580541 NPHP1O15259 732 aa18.02■□□□□ 0.48
SKA2-205ENST00000580541 GTF2E1P29083 439 aaPredicted RBP18.02■□□□□ 0.48
SKA2-205ENST00000580541 FKBP8Q14318 412 aa18.02■□□□□ 0.48
SKA2-205ENST00000580541 TPTE2Q6XPS3 522 aa18.02■□□□□ 0.48
SKA2-205ENST00000580541 MTFR1LQ9H019 292 aa18.02■□□□□ 0.48
SKA2-205ENST00000580541 BCL2L12Q9HB09 334 aa18.02■□□□□ 0.48
SKA2-205ENST00000580541 C9orf78Q9NZ63 289 aaPredicted RBP18.02■□□□□ 0.48
SKA2-205ENST00000580541 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.48
SKA2-205ENST00000580541 TUBGCP6Q96RT7 1819 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 NEURL1BA8MQ27 555 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 GPTP24298 496 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 TM4SF1P30408 202 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 TBC1D9BQ66K14 1250 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 BICDL1Q6ZP65 573 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 ITPRIPQ8IWB1 547 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 UTP14AQ9BVJ6 771 aaKnown RBP18.01■□□□□ 0.47
SKA2-205ENST00000580541 DDX19BQ9UMR2 479 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 IBTKQ9P2D0 1353 aaPredicted RBP18.01■□□□□ 0.47
SKA2-205ENST00000580541 C4AP0C0L4 1744 aa18.01■□□□□ 0.47
SKA2-205ENST00000580541 ARFGEF2Q9Y6D5 1785 aa18■□□□□ 0.47
SKA2-205ENST00000580541 PSDA5PKW4 1024 aaPredicted RBP18■□□□□ 0.47
SKA2-205ENST00000580541 NEFLP07196 543 aa18■□□□□ 0.47
SKA2-205ENST00000580541 POLD1P28340 1107 aa18■□□□□ 0.47
SKA2-205ENST00000580541 GCKRQ14397 625 aa18■□□□□ 0.47
SKA2-205ENST00000580541 NFIXQ14938 502 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms