RNA–Protein interactions for RNA: ENST00000580186.1

TMEM220-204, Transcript of transmembrane protein 220, humanhuman

TSL 2

Gene TMEM220, Length 509 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM220-204ENST00000580186 PLEKHD1A6NEE1 506 aa9.1□□□□□ -0.95
TMEM220-204ENST00000580186 NDUFB5O43674 189 aa9.1□□□□□ -0.95
TMEM220-204ENST00000580186 PRPF40AO75400 957 aaKnown RBP9.1□□□□□ -0.95
TMEM220-204ENST00000580186 PLCB3Q01970 1234 aa9.1□□□□□ -0.95
TMEM220-204ENST00000580186 AFAP1Q8N556 730 aa9.1□□□□□ -0.95
TMEM220-204ENST00000580186 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.1□□□□□ -0.95
TMEM220-204ENST00000580186 CCDC87Q9NVE4 849 aa9.1□□□□□ -0.95
TMEM220-204ENST00000580186 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.1□□□□□ -0.95
TMEM220-204ENST00000580186 MYO5CQ9NQX4 1742 aa9.1□□□□□ -0.95
TMEM220-204ENST00000580186 MROH2AA6NES4 1674 aa9.1□□□□□ -0.95
TMEM220-204ENST00000580186 KDM5CP41229 1560 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 PLCH2O75038 1416 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 SORBS3O60504 671 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 DMRTA1Q5VZB9 504 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 SH3BP5LQ7L8J4 393 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 TMC4Q7Z404 712 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 SCUBE3Q8IX30 993 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 TRIM52Q96A61 297 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 NUDT12Q9BQG2 462 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 SALL2Q9Y467 1007 aaPredicted RBP9.09□□□□□ -0.95
TMEM220-204ENST00000580186 LRRC7Q96NW7 1537 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 SBNO2Q9Y2G9 1366 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 ABCA6Q8N139 1617 aa9.09□□□□□ -0.95
TMEM220-204ENST00000580186 RNF17Q9BXT8 1623 aaKnown RBP9.09□□□□□ -0.95
TMEM220-204ENST00000580186 TK2O00142 265 aa9.08□□□□□ -0.96
TMEM220-204ENST00000580186 DNAJA1P31689 397 aaKnown RBP9.08□□□□□ -0.96
TMEM220-204ENST00000580186 ZNF76P36508 570 aa9.08□□□□□ -0.96
TMEM220-204ENST00000580186 DAB2P98082 770 aa9.08□□□□□ -0.96
TMEM220-204ENST00000580186 EHHADHQ08426 723 aa9.08□□□□□ -0.96
TMEM220-204ENST00000580186 PSMD2Q13200 908 aa9.08□□□□□ -0.96
TMEM220-204ENST00000580186 IFFO2Q5TF58 517 aa9.08□□□□□ -0.96
TMEM220-204ENST00000580186 SAP130Q9H0E3 1048 aa9.08□□□□□ -0.96
TMEM220-204ENST00000580186 ZNF518AQ6AHZ1 1483 aa9.08□□□□□ -0.96
TMEM220-204ENST00000580186 STRCP1A6NGW2 1772 aa9.07□□□□□ -0.96
TMEM220-204ENST00000580186 MAGEB6P1A0A0J9YX57 407 aa9.07□□□□□ -0.96
TMEM220-204ENST00000580186 COL26A1Q96A83 441 aa9.07□□□□□ -0.96
TMEM220-204ENST00000580186 METTL5Q9NRN9 209 aaKnown RBP9.07□□□□□ -0.96
TMEM220-204ENST00000580186 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.07□□□□□ -0.96
TMEM220-204ENST00000580186 AXIN2Q9Y2T1 843 aa9.07□□□□□ -0.96
TMEM220-204ENST00000580186 PCDHB11Q9Y5F2 797 aa9.07□□□□□ -0.96
TMEM220-204ENST00000580186 POLR1AO95602 1720 aaPredicted RBP9.07□□□□□ -0.96
TMEM220-204ENST00000580186 CDC42BPBQ9Y5S2 1711 aa9.07□□□□□ -0.96
TMEM220-204ENST00000580186 FMN1Q68DA7 1419 aa9.06□□□□□ -0.96
TMEM220-204ENST00000580186 DNMT1P26358 1616 aaKnown RBP9.06□□□□□ -0.96
TMEM220-204ENST00000580186 IGHA2P01877 340 aa9.06□□□□□ -0.96
TMEM220-204ENST00000580186 PRKD2Q9BZL6 878 aa9.06□□□□□ -0.96
TMEM220-204ENST00000580186 PRDM9Q9NQV7 894 aa9.06□□□□□ -0.96
TMEM220-204ENST00000580186 NLRP2Q9NX02 1062 aa9.06□□□□□ -0.96
TMEM220-204ENST00000580186 VPS9D1Q9Y2B5 631 aa9.06□□□□□ -0.96
TMEM220-204ENST00000580186 SETBP1Q9Y6X0 1596 aa9.06□□□□□ -0.96
TMEM220-204ENST00000580186 GPR182O15218 404 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 FZD6O60353 706 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 DXOO77932 396 aaKnown RBP9.05□□□□□ -0.96
TMEM220-204ENST00000580186 EFCAB2Q5VUJ9 269 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 SDE2Q6IQ49 451 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 GPATCH3Q96I76 525 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 ZFRQ96KR1 1074 aaKnown RBP9.05□□□□□ -0.96
TMEM220-204ENST00000580186 ZNF358Q9NW07 568 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 TBX22Q9Y458 520 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 EMILIN1Q9Y6C2 1016 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 PREX2Q70Z35 1606 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 TROQ12816 1431 aaPredicted RBP9.05□□□□□ -0.96
TMEM220-204ENST00000580186 FAM135BQ49AJ0 1406 aa9.05□□□□□ -0.96
TMEM220-204ENST00000580186 A2ML1A8K2U0 1454 aa9.04□□□□□ -0.96
TMEM220-204ENST00000580186 MLH3Q9UHC1 1453 aa9.04□□□□□ -0.96
TMEM220-204ENST00000580186 M0R2N6 131 aa9.04□□□□□ -0.96
TMEM220-204ENST00000580186 MARCH6O60337 910 aa9.04□□□□□ -0.96
TMEM220-204ENST00000580186 IGFBP4P22692 258 aa9.04□□□□□ -0.96
TMEM220-204ENST00000580186 LSM11P83369 360 aaKnown RBP eCLIP9.04□□□□□ -0.96
TMEM220-204ENST00000580186 USP4Q13107 963 aa9.04□□□□□ -0.96
TMEM220-204ENST00000580186 PPP1R18Q6NYC8 613 aa9.04□□□□□ -0.96
TMEM220-204ENST00000580186 FAM160A2Q8N612 972 aaPredicted RBP9.04□□□□□ -0.96
TMEM220-204ENST00000580186 SCG3Q8WXD2 468 aaKnown RBP9.04□□□□□ -0.96
TMEM220-204ENST00000580186 ZSWIM4Q9H7M6 989 aa9.04□□□□□ -0.96
TMEM220-204ENST00000580186 CDC42BPAQ5VT25 1732 aa9.03□□□□□ -0.96
TMEM220-204ENST00000580186 EIF1AXP47813 144 aaKnown RBP9.03□□□□□ -0.96
TMEM220-204ENST00000580186 AAMPQ13685 434 aa9.03□□□□□ -0.96
TMEM220-204ENST00000580186 EGFLAMQ63HQ2 1017 aa9.03□□□□□ -0.96
TMEM220-204ENST00000580186 PTCRAQ6ISU1 281 aaPredicted RBP9.03□□□□□ -0.96
TMEM220-204ENST00000580186 LAPTM4BQ86VI4 370 aa9.03□□□□□ -0.96
TMEM220-204ENST00000580186 NLGN1Q8N2Q7 840 aa9.03□□□□□ -0.96
TMEM220-204ENST00000580186 GMLQ99445 158 aa9.03□□□□□ -0.96
TMEM220-204ENST00000580186 ESPNB1AK53 854 aa9.02□□□□□ -0.97
TMEM220-204ENST00000580186 FOXO3O43524 673 aa9.02□□□□□ -0.97
TMEM220-204ENST00000580186 STAU1O95793 577 aaKnown RBP9.02□□□□□ -0.97
TMEM220-204ENST00000580186 PDE3BQ13370 1112 aa9.02□□□□□ -0.97
TMEM220-204ENST00000580186 ERFEQ4G0M1 354 aa9.02□□□□□ -0.97
TMEM220-204ENST00000580186 RNF20Q5VTR2 975 aa9.02□□□□□ -0.97
TMEM220-204ENST00000580186 TNS4Q8IZW8 715 aa9.02□□□□□ -0.97
TMEM220-204ENST00000580186 UNC93B1Q9H1C4 597 aa9.02□□□□□ -0.97
TMEM220-204ENST00000580186 CASKIN1Q8WXD9 1431 aa9.02□□□□□ -0.97
TMEM220-204ENST00000580186 ABCC1P33527 1531 aa9.01□□□□□ -0.97
TMEM220-204ENST00000580186 ITSN2Q9NZM3 1697 aa9.01□□□□□ -0.97
TMEM220-204ENST00000580186 BHMG1C9JSJ3 638 aaPredicted RBP9.01□□□□□ -0.97
TMEM220-204ENST00000580186 SYNMO15061 1565 aa9.01□□□□□ -0.97
TMEM220-204ENST00000580186 RAB11FIP3O75154 756 aa9.01□□□□□ -0.97
TMEM220-204ENST00000580186 APLP1P51693 650 aa9.01□□□□□ -0.97
TMEM220-204ENST00000580186 GNL2Q13823 731 aaKnown RBP9.01□□□□□ -0.97
TMEM220-204ENST00000580186 ZNF394Q53GI3 561 aa9.01□□□□□ -0.97
TMEM220-204ENST00000580186 NOL8Q76FK4 1167 aaKnown RBP9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms