RNA–Protein interactions for RNA: ENST00000580127.5

MKS1-209, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 843 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-209ENST00000580127 NBPF5PQ86XG9 351 aaPredicted RBP23.83■■□□□ 1.41
MKS1-209ENST00000580127 TAOK3Q9H2K8 898 aa23.83■■□□□ 1.41
MKS1-209ENST00000580127 KCNQ3O43525 872 aa23.82■■□□□ 1.4
MKS1-209ENST00000580127 TPTE2Q6XPS3 522 aa23.82■■□□□ 1.4
MKS1-209ENST00000580127 CCDC24Q8N4L8 307 aa23.82■■□□□ 1.4
MKS1-209ENST00000580127 RGL2O15211 777 aa23.81■■□□□ 1.4
MKS1-209ENST00000580127 SRGNP10124 158 aa23.81■■□□□ 1.4
MKS1-209ENST00000580127 PRELPP51888 382 aa23.81■■□□□ 1.4
MKS1-209ENST00000580127 LTBP3Q9NS15 1303 aa23.81■■□□□ 1.4
MKS1-209ENST00000580127 PPP2R1AP30153 589 aa23.8■■□□□ 1.4
MKS1-209ENST00000580127 TAF7Q15545 349 aaPredicted RBP23.79■■□□□ 1.4
MKS1-209ENST00000580127 PRPF40BQ6NWY9 871 aaKnown RBP23.79■■□□□ 1.4
MKS1-209ENST00000580127 MCM10Q7L590 875 aa23.79■■□□□ 1.4
MKS1-209ENST00000580127 SCN7AQ01118 1682 aa23.78■■□□□ 1.4
MKS1-209ENST00000580127 ANKRD31Q8N7Z5 1873 aa23.78■■□□□ 1.4
MKS1-209ENST00000580127 NPR1P16066 1061 aa23.77■■□□□ 1.4
MKS1-209ENST00000580127 GTF2E1P29083 439 aaPredicted RBP23.77■■□□□ 1.4
MKS1-209ENST00000580127 DICER1Q9UPY3 1922 aaKnown RBP23.76■■□□□ 1.39
MKS1-209ENST00000580127 PNISRQ8TF01 805 aaKnown RBP23.76■■□□□ 1.39
MKS1-209ENST00000580127 NIP7Q9Y221 180 aaKnown RBP eCLIP23.76■■□□□ 1.39
MKS1-209ENST00000580127 TIAM2Q8IVF5 1701 aa23.76■■□□□ 1.39
MKS1-209ENST00000580127 FER1L6Q2WGJ9 1857 aa23.75■■□□□ 1.39
MKS1-209ENST00000580127 ALDH1B1P30837 517 aa23.75■■□□□ 1.39
MKS1-209ENST00000580127 PNNQ9H307 717 aaKnown RBP23.75■■□□□ 1.39
MKS1-209ENST00000580127 IQCA1LA6NCM1 817 aa23.74■■□□□ 1.39
MKS1-209ENST00000580127 PIP4K2AP48426 406 aaPredicted RBP23.74■■□□□ 1.39
MKS1-209ENST00000580127 CCDC93Q567U6 631 aa23.74■■□□□ 1.39
MKS1-209ENST00000580127 RTKN2Q8IZC4 609 aa23.74■■□□□ 1.39
MKS1-209ENST00000580127 POTECB2RU33 542 aa23.73■■□□□ 1.39
MKS1-209ENST00000580127 CHADLQ6NUI6 762 aa23.73■■□□□ 1.39
MKS1-209ENST00000580127 DCTN1Q14203 1278 aa23.72■■□□□ 1.39
MKS1-209ENST00000580127 SLX4Q8IY92 1834 aa23.72■■□□□ 1.39
MKS1-209ENST00000580127 PRAMEF22A3QJZ6 481 aa23.71■■□□□ 1.39
MKS1-209ENST00000580127 DDNO94850 711 aaPredicted RBP23.71■■□□□ 1.39
MKS1-209ENST00000580127 NYXQ9GZU5 481 aa23.71■■□□□ 1.39
MKS1-209ENST00000580127 KLRG2A4D1S0 409 aaPredicted RBP23.7■■□□□ 1.38
MKS1-209ENST00000580127 FAM177BA6PVY3 158 aa23.69■■□□□ 1.38
MKS1-209ENST00000580127 NBPF26B4DH59 902 aa23.69■■□□□ 1.38
MKS1-209ENST00000580127 NBPF10Q6P3W6 841 aaKnown RBP23.69■■□□□ 1.38
MKS1-209ENST00000580127 NBPF15Q8N660 670 aa23.69■■□□□ 1.38
MKS1-209ENST00000580127 BCORQ6W2J9 1755 aa23.69■■□□□ 1.38
MKS1-209ENST00000580127 COL11A2P13942 1736 aaPredicted RBP23.68■■□□□ 1.38
MKS1-209ENST00000580127 FKBP4Q02790 459 aaKnown RBP eCLIP23.68■■□□□ 1.38
MKS1-209ENST00000580127 C7orf43Q8WVR3 580 aa23.68■■□□□ 1.38
MKS1-209ENST00000580127 CACNA1SQ13698 1873 aa23.67■■□□□ 1.38
MKS1-209ENST00000580127 ERVV-1B6SEH8 477 aa23.67■■□□□ 1.38
MKS1-209ENST00000580127 COL13A1Q5TAT6 717 aaPredicted RBP23.67■■□□□ 1.38
MKS1-209ENST00000580127 KIF6Q6ZMV9 814 aa23.67■■□□□ 1.38
MKS1-209ENST00000580127 CREBZFQ9NS37 354 aa23.67■■□□□ 1.38
MKS1-209ENST00000580127 TNS4Q8IZW8 715 aa23.66■■□□□ 1.38
MKS1-209ENST00000580127 MIS18AQ9NYP9 233 aa23.66■■□□□ 1.38
MKS1-209ENST00000580127 GRIPAP1Q4V328 841 aa23.65■■□□□ 1.38
MKS1-209ENST00000580127 CC2D2BQ6DHV5 1058 aa23.65■■□□□ 1.38
MKS1-209ENST00000580127 LDHDQ86WU2 507 aa23.65■■□□□ 1.38
MKS1-209ENST00000580127 NGEFQ8N5V2 710 aa23.65■■□□□ 1.38
MKS1-209ENST00000580127 L3MBTL3Q96JM7 780 aaPredicted RBP23.65■■□□□ 1.38
MKS1-209ENST00000580127 ARFGEF2Q9Y6D5 1785 aa23.65■■□□□ 1.38
MKS1-209ENST00000580127 RRP7AQ9Y3A4 280 aaKnown RBP23.64■■□□□ 1.37
MKS1-209ENST00000580127 HLFQ16534 295 aa23.63■■□□□ 1.37
MKS1-209ENST00000580127 JDP2Q8WYK2 163 aa23.63■■□□□ 1.37
MKS1-209ENST00000580127 ZNF277Q9NRM2 450 aaPredicted RBP23.63■■□□□ 1.37
MKS1-209ENST00000580127 MAPK8IP3Q9UPT6 1336 aa23.62■■□□□ 1.37
MKS1-209ENST00000580127 HSPA1AP0DMV8 641 aaKnown RBP23.62■■□□□ 1.37
MKS1-209ENST00000580127 HSPA1BP0DMV9 641 aaKnown RBP23.62■■□□□ 1.37
MKS1-209ENST00000580127 PNMA8AQ86V59 439 aaPredicted RBP23.62■■□□□ 1.37
MKS1-209ENST00000580127 RPGRQ92834 1020 aaKnown RBP23.62■■□□□ 1.37
MKS1-209ENST00000580127 TAF1DQ9H5J8 278 aaPredicted RBP23.62■■□□□ 1.37
MKS1-209ENST00000580127 HACL1Q9UJ83 578 aa23.62■■□□□ 1.37
MKS1-209ENST00000580127 CLEC11AQ9Y240 323 aa23.62■■□□□ 1.37
MKS1-209ENST00000580127 SCN4AP35499 1836 aa23.61■■□□□ 1.37
MKS1-209ENST00000580127 NFE2L2Q16236 605 aa23.61■■□□□ 1.37
MKS1-209ENST00000580127 SYNE4Q8N205 404 aa23.61■■□□□ 1.37
MKS1-209ENST00000580127 TMX4Q9H1E5 349 aaPredicted RBP23.61■■□□□ 1.37
MKS1-209ENST00000580127 MAP3K15Q6ZN16 1313 aa23.6■■□□□ 1.37
MKS1-209ENST00000580127 IARSP41252 1262 aaKnown RBP23.6■■□□□ 1.37
MKS1-209ENST00000580127 EIF4A1P60842 406 aaKnown RBP23.6■■□□□ 1.37
MKS1-209ENST00000580127 EAPPQ56P03 285 aaPredicted RBP23.59■■□□□ 1.37
MKS1-209ENST00000580127 PSMD1Q99460 953 aa23.59■■□□□ 1.37
MKS1-209ENST00000580127 MYL6BP14649 208 aa23.58■■□□□ 1.37
MKS1-209ENST00000580127 EIF6P56537 245 aaKnown RBP23.57■■□□□ 1.36
MKS1-209ENST00000580127 CRY2Q49AN0 593 aa23.57■■□□□ 1.36
MKS1-209ENST00000580127 PPP1R42Q7Z4L9 355 aa23.57■■□□□ 1.36
MKS1-209ENST00000580127 GPC2Q8N158 579 aa23.57■■□□□ 1.36
MKS1-209ENST00000580127 RBM17Q96I25 401 aaKnown RBP23.57■■□□□ 1.36
MKS1-209ENST00000580127 MKRN1Q9UHC7 482 aaKnown RBP23.57■■□□□ 1.36
MKS1-209ENST00000580127 ERBB4Q15303 1308 aa23.57■■□□□ 1.36
MKS1-209ENST00000580127 FZD9O00144 591 aa23.56■■□□□ 1.36
MKS1-209ENST00000580127 POTEIP0CG38 1075 aa23.56■■□□□ 1.36
MKS1-209ENST00000580127 POTEJP0CG39 1038 aa23.56■■□□□ 1.36
MKS1-209ENST00000580127 EPHX2P34913 555 aa23.56■■□□□ 1.36
MKS1-209ENST00000580127 NUTM1Q86Y26 1132 aa23.56■■□□□ 1.36
MKS1-209ENST00000580127 PLEKHF1Q96S99 279 aa23.56■■□□□ 1.36
MKS1-209ENST00000580127 TMEM88BA6NKF7 163 aa23.55■■□□□ 1.36
MKS1-209ENST00000580127 HOXA10P31260 410 aaPredicted RBP23.55■■□□□ 1.36
MKS1-209ENST00000580127 DLG5Q8TDM6 1919 aa23.55■■□□□ 1.36
MKS1-209ENST00000580127 NUP98P52948 1817 aa23.54■■□□□ 1.36
MKS1-209ENST00000580127 GPTP24298 496 aa23.54■■□□□ 1.36
MKS1-209ENST00000580127 PARP10Q53GL7 1025 aa23.54■■□□□ 1.36
MKS1-209ENST00000580127 OLFM4Q6UX06 510 aa23.54■■□□□ 1.36
MKS1-209ENST00000580127 CRAMP1Q96RY5 1269 aa23.54■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms