RNA–Protein interactions for RNA: ENST00000580104.5

TRAPPC8-207, Transcript of trafficking protein particle complex 8, humanhuman

TSL 2

Gene TRAPPC8, Length 5,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-207ENST00000580104 C8orf76Q96K31 380 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 RUFY1Q96T51 708 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 CBFA2T2O43439 604 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 CABP4P57796 275 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 LEKR1Q6ZMV7 388 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 CCDC82Q8N4S0 544 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 ABCC10Q5T3U5 1492 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 CCDC57Q2TAC2 916 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 NEK1Q96PY6 1258 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 U3KPZ7 1027 aaPredicted RBP15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
TRAPPC8-207ENST00000580104 RAD21O60216 631 aa15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 SKILP12757 684 aa15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 XBP1P17861 261 aa15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 CCDC94Q9BW85 323 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 CCDC47Q96A33 483 aaKnown RBP15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 ABCA5Q8WWZ7 1642 aa15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 SETQ01105 290 aaPredicted RBP15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 STX1AQ16623 288 aa15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 WDR7Q9Y4E6 1490 aa15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 TTC21BQ7Z4L5 1316 aa15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 NOM1Q5C9Z4 860 aaKnown RBP15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 LARP1Q6PKG0 1096 aaKnown RBP15.89■□□□□ 0.13
TRAPPC8-207ENST00000580104 PPIP5K1Q6PFW1 1433 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 IDH1O75874 414 aaKnown RBP15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 HAND2P61296 217 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 DDX46Q7L014 1031 aaKnown RBP15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 GPT2Q8TD30 523 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 PHAXQ9H814 394 aaKnown RBP15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 MBD5Q9P267 1494 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 IMMTQ16891 758 aaKnown RBP15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 AXDND1Q5T1B0 1012 aaPredicted RBP15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 SMARCE1Q969G3 411 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 AK7Q96M32 723 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 GOLIM4O00461 696 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 KLHL10Q6JEL2 608 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 BRMS1Q9HCU9 246 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 CTNNA3Q9UI47 895 aa15.88■□□□□ 0.13
TRAPPC8-207ENST00000580104 PNMA6EA0A0J9YXQ4 647 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 SNW1Q13573 536 aaKnown RBP15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 TRIM22Q8IYM9 498 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 PUS7Q96PZ0 661 aaKnown RBP15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 ATP5J2-PTCD1G3V325 749 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 KIF2AO00139 706 aaPredicted RBP15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 CTAGE5O15320 804 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 PTCD1O75127 700 aaKnown RBP15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 HSP90AA4PQ58FG1 418 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 PPP1R9BQ96SB3 815 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 CCDC69A6NI79 296 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 IFIT1P09914 478 aaKnown RBP15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 ZBTB9Q96C00 473 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.87■□□□□ 0.132e-6■■■■■ 27.7
TRAPPC8-207ENST00000580104 SNRKQ9NRH2 765 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 AMOTL2Q9Y2J4 779 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 SLC3A2P08195 630 aaKnown RBP15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 TOP1P11387 765 aaKnown RBP15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 IL13P35225 146 aa15.87■□□□□ 0.13
TRAPPC8-207ENST00000580104 GTF2F1P35269 517 aaKnown RBP eCLIP15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 NMIQ13287 307 aaPredicted RBP15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 CPLX3Q8WVH0 158 aa15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 CCDC102AQ96A19 550 aa15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 PALD1Q9ULE6 856 aa15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 KIF21AQ7Z4S6 1674 aa15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 PATL2C9JE40 543 aaKnown RBP15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 PIBF1Q8WXW3 757 aa15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 PAXBP1Q9Y5B6 917 aa15.86■□□□□ 0.13
TRAPPC8-207ENST00000580104 A0A087WZG4 1122 aa15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 UBE3BQ7Z3V4 1068 aa15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 ZSWIM4Q9H7M6 989 aa15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 MAST1Q9Y2H9 1570 aa15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 GOLGA8BA8MQT2 603 aa15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 FAM193AP78312 1265 aa15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 DHX8Q14562 1220 aaKnown RBP15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 SOS1Q07889 1333 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 NEMFO60524 1076 aa15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 ERCC4Q92889 916 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC8-207ENST00000580104 ARHGAP29Q52LW3 1261 aa15.84■□□□□ 0.13
TRAPPC8-207ENST00000580104 CCDC144CPQ8IYA2 1237 aa15.84■□□□□ 0.13
TRAPPC8-207ENST00000580104 AOPEPQ8N6M6 819 aa15.84■□□□□ 0.13
TRAPPC8-207ENST00000580104 ERBB4Q15303 1308 aa15.84■□□□□ 0.13
TRAPPC8-207ENST00000580104 ATF3P18847 181 aa15.84■□□□□ 0.13
TRAPPC8-207ENST00000580104 CWF19L2Q2TBE0 894 aaKnown RBP15.84■□□□□ 0.13
TRAPPC8-207ENST00000580104 DACH1Q9UI36 760 aa15.84■□□□□ 0.13
TRAPPC8-207ENST00000580104 RIOK3O14730 519 aaKnown RBP15.83■□□□□ 0.13
TRAPPC8-207ENST00000580104 CDKL5O76039 1030 aa15.83■□□□□ 0.13
TRAPPC8-207ENST00000580104 BRD1O95696 1058 aa15.83■□□□□ 0.13
TRAPPC8-207ENST00000580104 CREB3L3Q68CJ9 461 aa15.83■□□□□ 0.13
TRAPPC8-207ENST00000580104 Q6ZUG5 572 aa15.83■□□□□ 0.13
TRAPPC8-207ENST00000580104 THEMISQ8N1K5 641 aaPredicted RBP15.83■□□□□ 0.13
TRAPPC8-207ENST00000580104 ABCC2Q92887 1545 aa15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 ADGBQ8N7X0 1667 aa15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 RIMS2Q9UQ26 1411 aa15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 SNX14Q9Y5W7 946 aa15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 GSDMDP57764 484 aa15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 PLEKHF1Q96S99 279 aa15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 H0YHG0 523 aa15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 HMGB1P09429 215 aaKnown RBP15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 PIP4K2AP48426 406 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 CEBPAP49715 358 aaPredicted RBP15.83■□□□□ 0.12
TRAPPC8-207ENST00000580104 CHST3Q7LGC8 479 aa15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms