RNA–Protein interactions for RNA: ENST00000580012.1

NDEL1-207, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

TSL 3

Gene NDEL1, Length 790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-207ENST00000580012 ZNF428Q96B54 188 aa29.24■■■□□ 2.27
NDEL1-207ENST00000580012 MAP3K15Q6ZN16 1313 aa29.23■■■□□ 2.27
NDEL1-207ENST00000580012 ARXQ96QS3 562 aa29.23■■■□□ 2.27
NDEL1-207ENST00000580012 TCERG1O14776 1098 aaKnown RBP29.22■■■□□ 2.27
NDEL1-207ENST00000580012 SLC4A2P04920 1241 aa29.22■■■□□ 2.27
NDEL1-207ENST00000580012 STK31Q9BXU1 1019 aa29.22■■■□□ 2.27
NDEL1-207ENST00000580012 PHAXQ9H814 394 aaKnown RBP29.21■■■□□ 2.27
NDEL1-207ENST00000580012 HLFQ16534 295 aa29.2■■■□□ 2.26
NDEL1-207ENST00000580012 KIF6Q6ZMV9 814 aa29.2■■■□□ 2.26
NDEL1-207ENST00000580012 AIMP1Q12904 312 aaKnown RBP29.19■■■□□ 2.26
NDEL1-207ENST00000580012 MMP10P09238 476 aa29.18■■■□□ 2.26
NDEL1-207ENST00000580012 POLD1P28340 1107 aa29.18■■■□□ 2.26
NDEL1-207ENST00000580012 NFIXQ14938 502 aa29.18■■■□□ 2.26
NDEL1-207ENST00000580012 PPP1R1BQ9UD71 204 aaPredicted RBP29.18■■■□□ 2.26
NDEL1-207ENST00000580012 C4AP0C0L4 1744 aa29.17■■■□□ 2.26
NDEL1-207ENST00000580012 TBC1D9BQ66K14 1250 aa29.17■■■□□ 2.26
NDEL1-207ENST00000580012 GIGYF2Q6Y7W6 1299 aaKnown RBP29.17■■■□□ 2.26
NDEL1-207ENST00000580012 ANKRD13DQ6ZTN6 518 aa29.17■■■□□ 2.26
NDEL1-207ENST00000580012 G2E3Q7L622 706 aa29.17■■■□□ 2.26
NDEL1-207ENST00000580012 PLBD2Q8NHP8 589 aa29.17■■■□□ 2.26
NDEL1-207ENST00000580012 ZNF652Q9Y2D9 606 aa29.17■■■□□ 2.26
NDEL1-207ENST00000580012 DDR1Q08345 913 aa29.16■■■□□ 2.26
NDEL1-207ENST00000580012 ZBTB3Q9H5J0 574 aa29.16■■■□□ 2.26
NDEL1-207ENST00000580012 COL24A1Q17RW2 1714 aa29.15■■■□□ 2.26
NDEL1-207ENST00000580012 ALDH1L2Q3SY69 923 aa29.15■■■□□ 2.26
NDEL1-207ENST00000580012 SSH1Q8WYL5 1049 aa29.15■■■□□ 2.26
NDEL1-207ENST00000580012 MRPL50Q8N5N7 158 aaKnown RBP29.14■■■□□ 2.26
NDEL1-207ENST00000580012 POLRMTO00411 1230 aaKnown RBP29.13■■■□□ 2.25
NDEL1-207ENST00000580012 FLIIQ13045 1269 aa29.12■■■□□ 2.25
NDEL1-207ENST00000580012 ZNF34Q8IZ26 560 aa29.12■■■□□ 2.25
NDEL1-207ENST00000580012 RARSP54136 660 aaKnown RBP29.11■■■□□ 2.25
NDEL1-207ENST00000580012 BRPF1P55201 1214 aaPredicted RBP29.11■■■□□ 2.25
NDEL1-207ENST00000580012 TCIRG1Q13488 830 aa29.11■■■□□ 2.25
NDEL1-207ENST00000580012 SETDB2Q96T68 719 aa29.11■■■□□ 2.25
NDEL1-207ENST00000580012 KSR2Q6VAB6 950 aa29.1■■■□□ 2.25
NDEL1-207ENST00000580012 BICDL1Q6ZP65 573 aa29.1■■■□□ 2.25
NDEL1-207ENST00000580012 YTHDC1Q96MU7 727 aaKnown RBP29.1■■■□□ 2.25
NDEL1-207ENST00000580012 PARP3Q9Y6F1 533 aa29.1■■■□□ 2.25
NDEL1-207ENST00000580012 ATP10DQ9P241 1426 aa29.1■■■□□ 2.25
NDEL1-207ENST00000580012 DDX58O95786 925 aaKnown RBP29.09■■■□□ 2.25
NDEL1-207ENST00000580012 HSP90AB3PQ58FF7 597 aa29.09■■■□□ 2.25
NDEL1-207ENST00000580012 NIP7Q9Y221 180 aaKnown RBP eCLIP29.09■■■□□ 2.25
NDEL1-207ENST00000580012 SCN7AQ01118 1682 aa29.08■■■□□ 2.25
NDEL1-207ENST00000580012 PI4KAP2A4QPH2 592 aa29.07■■■□□ 2.24
NDEL1-207ENST00000580012 SERPINB2P05120 415 aa29.07■■■□□ 2.24
NDEL1-207ENST00000580012 RIC3Q7Z5B4 369 aa29.07■■■□□ 2.24
NDEL1-207ENST00000580012 PI4KAP1Q8N8J0 262 aa29.07■■■□□ 2.24
NDEL1-207ENST00000580012 TRIM28Q13263 835 aaKnown RBP29.06■■■□□ 2.24
NDEL1-207ENST00000580012 ISCA1Q9BUE6 129 aa29.06■■■□□ 2.24
NDEL1-207ENST00000580012 ADCY9O60503 1353 aa29.05■■■□□ 2.24
NDEL1-207ENST00000580012 METTL22Q9BUU2 404 aaPredicted RBP29.05■■■□□ 2.24
NDEL1-207ENST00000580012 CARMIL3Q8ND23 1372 aa29.04■■■□□ 2.24
NDEL1-207ENST00000580012 BCORQ6W2J9 1755 aa29.04■■■□□ 2.24
NDEL1-207ENST00000580012 UBN2Q6ZU65 1347 aa29.04■■■□□ 2.24
NDEL1-207ENST00000580012 SMC4Q9NTJ3 1288 aa29.04■■■□□ 2.24
NDEL1-207ENST00000580012 MAP3K2Q9Y2U5 619 aa29.04■■■□□ 2.24
NDEL1-207ENST00000580012 FKBP5Q13451 457 aaPredicted RBP29.03■■■□□ 2.24
NDEL1-207ENST00000580012 PARP10Q53GL7 1025 aa29.03■■■□□ 2.24
NDEL1-207ENST00000580012 BCL2L13Q9BXK5 485 aa29.03■■■□□ 2.24
NDEL1-207ENST00000580012 GPTP24298 496 aa29.02■■■□□ 2.24
NDEL1-207ENST00000580012 CD2APQ9Y5K6 639 aa29.02■■■□□ 2.24
NDEL1-207ENST00000580012 SUSD4Q5VX71 490 aa29.01■■■□□ 2.23
NDEL1-207ENST00000580012 NLRP10Q86W26 655 aa29.01■■■□□ 2.23
NDEL1-207ENST00000580012 PTPRCP08575 1304 aa29■■■□□ 2.23
NDEL1-207ENST00000580012 PRR5LQ6MZQ0 368 aa29■■■□□ 2.23
NDEL1-207ENST00000580012 TPTE2Q6XPS3 522 aa29■■■□□ 2.23
NDEL1-207ENST00000580012 NBPF5PQ86XG9 351 aaPredicted RBP28.99■■■□□ 2.23
NDEL1-207ENST00000580012 DNAAF4Q8WXU2 420 aa28.99■■■□□ 2.23
NDEL1-207ENST00000580012 FHDC1Q9C0D6 1143 aaPredicted RBP28.99■■■□□ 2.23
NDEL1-207ENST00000580012 DCAF8L1A6NGE4 600 aa28.98■■■□□ 2.23
NDEL1-207ENST00000580012 ATP5J2-PTCD1G3V325 749 aa28.98■■■□□ 2.23
NDEL1-207ENST00000580012 BCAR3O75815 825 aa28.98■■■□□ 2.23
NDEL1-207ENST00000580012 MYD88Q99836 296 aa28.98■■■□□ 2.23
NDEL1-207ENST00000580012 IBTKQ9P2D0 1353 aaPredicted RBP28.98■■■□□ 2.23
NDEL1-207ENST00000580012 NTSR2O95665 410 aa28.97■■■□□ 2.23
NDEL1-207ENST00000580012 IGKV5-2P06315 115 aa28.97■■■□□ 2.23
NDEL1-207ENST00000580012 SYT17Q9BSW7 474 aa28.97■■■□□ 2.23
NDEL1-207ENST00000580012 NYXQ9GZU5 481 aa28.97■■■□□ 2.23
NDEL1-207ENST00000580012 NOB1Q9ULX3 412 aaKnown RBP28.97■■■□□ 2.23
NDEL1-207ENST00000580012 C10orf71Q711Q0 1435 aa28.96■■■□□ 2.23
NDEL1-207ENST00000580012 F6X3S4 739 aa28.96■■■□□ 2.23
NDEL1-207ENST00000580012 YY1P25490 414 aa28.96■■■□□ 2.23
NDEL1-207ENST00000580012 PPP1R42Q7Z4L9 355 aa28.96■■■□□ 2.23
NDEL1-207ENST00000580012 CNBD1Q8NA66 436 aa28.96■■■□□ 2.23
NDEL1-207ENST00000580012 CCDC191Q8NCU4 936 aa28.96■■■□□ 2.23
NDEL1-207ENST00000580012 ARHGAP45Q92619 1136 aa28.96■■■□□ 2.23
NDEL1-207ENST00000580012 UTP14AQ9BVJ6 771 aaKnown RBP28.96■■■□□ 2.23
NDEL1-207ENST00000580012 CACNA1FO60840 1977 aa28.95■■■□□ 2.23
NDEL1-207ENST00000580012 BEND3Q5T5X7 828 aa28.94■■■□□ 2.22
NDEL1-207ENST00000580012 BRIP1Q9BX63 1249 aa28.94■■■□□ 2.22
NDEL1-207ENST00000580012 NUP98P52948 1817 aa28.94■■■□□ 2.22
NDEL1-207ENST00000580012 FAM177BA6PVY3 158 aa28.93■■■□□ 2.22
NDEL1-207ENST00000580012 NEXNQ0ZGT2 675 aa28.93■■■□□ 2.22
NDEL1-207ENST00000580012 SLC10A5Q5PT55 438 aa28.93■■■□□ 2.22
NDEL1-207ENST00000580012 LINS1Q8NG48 757 aa28.93■■■□□ 2.22
NDEL1-207ENST00000580012 RNF123Q5XPI4 1314 aa28.93■■■□□ 2.22
NDEL1-207ENST00000580012 NRXN2Q9P2S2 1712 aa28.92■■■□□ 2.22
NDEL1-207ENST00000580012 TGFB2P61812 414 aa28.92■■■□□ 2.22
NDEL1-207ENST00000580012 KLRG2A4D1S0 409 aaPredicted RBP28.91■■■□□ 2.22
NDEL1-207ENST00000580012 NEURL1BA8MQ27 555 aa28.91■■■□□ 2.22
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms