RNA–Protein interactions for RNA: ENST00000579339.5

LINC00271-205, long intergenic non-protein coding RNA 271, humanhuman

TSL 1 (best)

Gene LINC00271, Length 397 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-205ENST00000579339 C2CD5Q86YS7 1000 aa35.02■■■■□ 3.2
LINC00271-205ENST00000579339 CNBD1Q8NA66 436 aa35.02■■■■□ 3.2
LINC00271-205ENST00000579339 NPHP1O15259 732 aa35.01■■■■□ 3.2
LINC00271-205ENST00000579339 ANXA1P04083 346 aa35.01■■■■□ 3.2
LINC00271-205ENST00000579339 NIP7Q9Y221 180 aaKnown RBP eCLIP35.01■■■■□ 3.2
LINC00271-205ENST00000579339 ERBB4Q15303 1308 aa35.01■■■■□ 3.19
LINC00271-205ENST00000579339 PDIA6Q15084 440 aa35■■■■□ 3.19
LINC00271-205ENST00000579339 PROSER3Q2NL68 480 aa35■■■■□ 3.19
LINC00271-205ENST00000579339 ARHGAP27Q6ZUM4 889 aa35■■■■□ 3.19
LINC00271-205ENST00000579339 CFAP44Q96MT7 982 aa35■■■■□ 3.19
LINC00271-205ENST00000579339 KIF6Q6ZMV9 814 aa34.99■■■■□ 3.19
LINC00271-205ENST00000579339 MAP3K15Q6ZN16 1313 aa34.99■■■■□ 3.19
LINC00271-205ENST00000579339 ANKRD31Q8N7Z5 1873 aa34.99■■■■□ 3.19
LINC00271-205ENST00000579339 FAM177BA6PVY3 158 aa34.98■■■■□ 3.19
LINC00271-205ENST00000579339 NBPF5PQ86XG9 351 aaPredicted RBP34.98■■■■□ 3.19
LINC00271-205ENST00000579339 ZBTB3Q9H5J0 574 aa34.98■■■■□ 3.19
LINC00271-205ENST00000579339 MBIPQ9NS73 344 aa34.98■■■■□ 3.19
LINC00271-205ENST00000579339 H0YIN7 160 aa34.97■■■■□ 3.19
LINC00271-205ENST00000579339 RGL2O15211 777 aa34.97■■■■□ 3.19
LINC00271-205ENST00000579339 BRIP1Q9BX63 1249 aa34.97■■■■□ 3.19
LINC00271-205ENST00000579339 ST5P78524 1137 aa34.96■■■■□ 3.19
LINC00271-205ENST00000579339 LRP10Q7Z4F1 713 aa34.96■■■■□ 3.19
LINC00271-205ENST00000579339 ERVV-1B6SEH8 477 aa34.95■■■■□ 3.19
LINC00271-205ENST00000579339 ZNF853P0CG23 659 aa34.95■■■■□ 3.19
LINC00271-205ENST00000579339 ARFGEF1Q9Y6D6 1849 aa34.94■■■■□ 3.18
LINC00271-205ENST00000579339 PDE6BP35913 854 aa34.93■■■■□ 3.18
LINC00271-205ENST00000579339 IFT57Q9NWB7 429 aa34.93■■■■□ 3.18
LINC00271-205ENST00000579339 DLEC1Q9Y238 1755 aa34.92■■■■□ 3.18
LINC00271-205ENST00000579339 ATP10DQ9P241 1426 aa34.92■■■■□ 3.18
LINC00271-205ENST00000579339 ZNF622Q969S3 477 aaKnown RBP eCLIP34.92■■■■□ 3.18
LINC00271-205ENST00000579339 ADCY9O60503 1353 aa34.91■■■■□ 3.18
LINC00271-205ENST00000579339 CALD1Q05682 793 aaKnown RBP34.91■■■■□ 3.18
LINC00271-205ENST00000579339 COL11A2P13942 1736 aaPredicted RBP34.91■■■■□ 3.18
LINC00271-205ENST00000579339 GPTP24298 496 aa34.9■■■■□ 3.18
LINC00271-205ENST00000579339 GNAI1P63096 354 aa34.9■■■■□ 3.18
LINC00271-205ENST00000579339 HDGFL1Q5TGJ6 251 aa34.9■■■■□ 3.18
LINC00271-205ENST00000579339 TTLL6Q8N841 843 aa34.9■■■■□ 3.18
LINC00271-205ENST00000579339 DUSP27Q5VZP5 1158 aa34.89■■■■□ 3.18
LINC00271-205ENST00000579339 TPTE2Q6XPS3 522 aa34.89■■■■□ 3.18
LINC00271-205ENST00000579339 NUP98P52948 1817 aa34.88■■■■□ 3.17
LINC00271-205ENST00000579339 AIMP1Q12904 312 aaKnown RBP34.88■■■■□ 3.17
LINC00271-205ENST00000579339 CHPF2Q9P2E5 772 aa34.88■■■■□ 3.17
LINC00271-205ENST00000579339 XAGE3Q8WTP9 111 aa34.87■■■■□ 3.17
LINC00271-205ENST00000579339 DDX21Q9NR30 783 aaKnown RBP eCLIP34.87■■■■□ 3.17
LINC00271-205ENST00000579339 UBN2Q6ZU65 1347 aa34.86■■■■□ 3.17
LINC00271-205ENST00000579339 HOXB7P09629 217 aa34.86■■■■□ 3.17
LINC00271-205ENST00000579339 GIGYF2Q6Y7W6 1299 aaKnown RBP34.86■■■■□ 3.17
LINC00271-205ENST00000579339 COPS6Q7L5N1 327 aa34.86■■■■□ 3.17
LINC00271-205ENST00000579339 PDZRN3Q9UPQ7 1066 aa34.86■■■■□ 3.17
LINC00271-205ENST00000579339 ZNF526Q8TF50 670 aaPredicted RBP34.85■■■■□ 3.17
LINC00271-205ENST00000579339 ELL2O00472 640 aaPredicted RBP34.84■■■■□ 3.17
LINC00271-205ENST00000579339 SRGNP10124 158 aa34.83■■■■□ 3.17
LINC00271-205ENST00000579339 GTF2E1P29083 439 aaPredicted RBP34.83■■■■□ 3.17
LINC00271-205ENST00000579339 NUTM1Q86Y26 1132 aa34.83■■■■□ 3.17
LINC00271-205ENST00000579339 WWC1Q8IX03 1113 aa34.83■■■■□ 3.17
LINC00271-205ENST00000579339 FAM9BQ8IZU0 186 aa34.83■■■■□ 3.17
LINC00271-205ENST00000579339 ZNF219Q9P2Y4 722 aaPredicted RBP34.83■■■■□ 3.17
LINC00271-205ENST00000579339 RASSF7Q02833 373 aa34.82■■■■□ 3.16
LINC00271-205ENST00000579339 CCDC27Q2M243 656 aa34.82■■■■□ 3.16
LINC00271-205ENST00000579339 ZNF34Q8IZ26 560 aa34.82■■■■□ 3.16
LINC00271-205ENST00000579339 SALL2Q9Y467 1007 aaPredicted RBP34.82■■■■□ 3.16
LINC00271-205ENST00000579339 ABCC12Q96J65 1359 aa34.82■■■■□ 3.16
LINC00271-205ENST00000579339 SUSD4Q5VX71 490 aa34.81■■■■□ 3.16
LINC00271-205ENST00000579339 C9orf131Q5VYM1 1079 aa34.81■■■■□ 3.16
LINC00271-205ENST00000579339 C8orf58Q8NAV2 365 aa34.8■■■■□ 3.16
LINC00271-205ENST00000579339 NYXQ9GZU5 481 aa34.8■■■■□ 3.16
LINC00271-205ENST00000579339 ERFEQ4G0M1 354 aa34.79■■■■□ 3.16
LINC00271-205ENST00000579339 STYK1Q6J9G0 422 aa34.79■■■■□ 3.16
LINC00271-205ENST00000579339 TSR2Q969E8 191 aaKnown RBP34.79■■■■□ 3.16
LINC00271-205ENST00000579339 MASTLQ96GX5 879 aa34.79■■■■□ 3.16
LINC00271-205ENST00000579339 DBF4Q9UBU7 674 aaPredicted RBP34.78■■■■□ 3.16
LINC00271-205ENST00000579339 C21orf2O43822 256 aa34.77■■■■□ 3.16
LINC00271-205ENST00000579339 CNKSR1Q969H4 720 aa34.77■■■■□ 3.16
LINC00271-205ENST00000579339 GPBP1L1Q9HC44 474 aaPredicted RBP34.76■■■■□ 3.16
LINC00271-205ENST00000579339 RNF181Q9P0P0 153 aa34.76■■■■□ 3.16
LINC00271-205ENST00000579339 TNRC6CQ9HCJ0 1690 aaKnown RBP34.76■■■■□ 3.15
LINC00271-205ENST00000579339 KLRG2A4D1S0 409 aaPredicted RBP34.75■■■■□ 3.15
LINC00271-205ENST00000579339 NTSR2O95665 410 aa34.75■■■■□ 3.15
LINC00271-205ENST00000579339 PRPF40BQ6NWY9 871 aaKnown RBP34.75■■■■□ 3.15
LINC00271-205ENST00000579339 IBTKQ9P2D0 1353 aaPredicted RBP34.74■■■■□ 3.15
LINC00271-205ENST00000579339 NPR1P16066 1061 aa34.73■■■■□ 3.15
LINC00271-205ENST00000579339 PARP10Q53GL7 1025 aa34.73■■■■□ 3.15
LINC00271-205ENST00000579339 TSPYL6Q8N831 410 aa34.73■■■■□ 3.15
LINC00271-205ENST00000579339 SLX4Q8IY92 1834 aa34.73■■■■□ 3.15
LINC00271-205ENST00000579339 CACNA1SQ13698 1873 aa34.72■■■■□ 3.15
LINC00271-205ENST00000579339 NFKBIEO00221 500 aa34.72■■■■□ 3.15
LINC00271-205ENST00000579339 HYPKQ9NX55 129 aa34.72■■■■□ 3.15
LINC00271-205ENST00000579339 PRELPP51888 382 aa34.71■■■■□ 3.15
LINC00271-205ENST00000579339 HSP90AB3PQ58FF7 597 aa34.71■■■■□ 3.15
LINC00271-205ENST00000579339 PPP1R42Q7Z4L9 355 aa34.71■■■■□ 3.15
LINC00271-205ENST00000579339 NCBP3Q53F19 620 aaKnown RBP34.7■■■■□ 3.15
LINC00271-205ENST00000579339 ZNF428Q96B54 188 aa34.7■■■■□ 3.15
LINC00271-205ENST00000579339 TCIRG1Q13488 830 aa34.69■■■■□ 3.14
LINC00271-205ENST00000579339 PLBD2Q8NHP8 589 aa34.69■■■■□ 3.14
LINC00271-205ENST00000579339 UTP14AQ9BVJ6 771 aaKnown RBP34.69■■■■□ 3.14
LINC00271-205ENST00000579339 SBF1O95248 1867 aa34.68■■■■□ 3.14
LINC00271-205ENST00000579339 IL16Q14005 1332 aa34.68■■■■□ 3.14
LINC00271-205ENST00000579339 ANKRD13DQ6ZTN6 518 aa34.68■■■■□ 3.14
LINC00271-205ENST00000579339 NLRP10Q86W26 655 aa34.68■■■■□ 3.14
LINC00271-205ENST00000579339 PHAXQ9H814 394 aaKnown RBP34.68■■■■□ 3.14
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms