RNA–Protein interactions for RNA: ENST00000579225.2

SRGAP2-204, Transcript of SLIT-ROBO Rho GTPase activating protein 2, humanhuman

TSL 3

Gene SRGAP2, Length 1,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2-204ENST00000579225 LTBP3Q9NS15 1303 aa22.53■■□□□ 1.2
SRGAP2-204ENST00000579225 FER1L6Q2WGJ9 1857 aa22.52■■□□□ 1.2
SRGAP2-204ENST00000579225 NEFMP07197 916 aa22.52■■□□□ 1.2
SRGAP2-204ENST00000579225 PRKAR2BP31323 418 aa22.52■■□□□ 1.2
SRGAP2-204ENST00000579225 STYK1Q6J9G0 422 aa22.52■■□□□ 1.2
SRGAP2-204ENST00000579225 DZIP3Q86Y13 1208 aaKnown RBP22.52■■□□□ 1.2
SRGAP2-204ENST00000579225 CNKSR1Q969H4 720 aa22.52■■□□□ 1.2
SRGAP2-204ENST00000579225 COL11A2P13942 1736 aaPredicted RBP22.51■■□□□ 1.19
SRGAP2-204ENST00000579225 NPHP1O15259 732 aa22.51■■□□□ 1.19
SRGAP2-204ENST00000579225 SRGNP10124 158 aa22.51■■□□□ 1.19
SRGAP2-204ENST00000579225 RSPH6AQ9H0K4 717 aa22.51■■□□□ 1.19
SRGAP2-204ENST00000579225 U2AF1L5P0DN76 240 aaPredicted RBP22.5■■□□□ 1.19
SRGAP2-204ENST00000579225 ST5P78524 1137 aa22.5■■□□□ 1.19
SRGAP2-204ENST00000579225 U2AF1Q01081 240 aaKnown RBP eCLIP22.5■■□□□ 1.19
SRGAP2-204ENST00000579225 TAOK3Q9H2K8 898 aa22.5■■□□□ 1.19
SRGAP2-204ENST00000579225 DICER1Q9UPY3 1922 aaKnown RBP22.49■■□□□ 1.19
SRGAP2-204ENST00000579225 PRPF40BQ6NWY9 871 aaKnown RBP22.49■■□□□ 1.19
SRGAP2-204ENST00000579225 MASTLQ96GX5 879 aa22.49■■□□□ 1.19
SRGAP2-204ENST00000579225 SLX4Q8IY92 1834 aa22.48■■□□□ 1.19
SRGAP2-204ENST00000579225 PRAMEF22A3QJZ6 481 aa22.48■■□□□ 1.19
SRGAP2-204ENST00000579225 PIP4K2AP48426 406 aaPredicted RBP22.48■■□□□ 1.19
SRGAP2-204ENST00000579225 CLEC4GQ6UXB4 293 aa22.48■■□□□ 1.19
SRGAP2-204ENST00000579225 SOGA3Q5TF21 947 aa22.47■■□□□ 1.19
SRGAP2-204ENST00000579225 ANP32CO43423 234 aa22.46■■□□□ 1.19
SRGAP2-204ENST00000579225 DDNO94850 711 aaPredicted RBP22.46■■□□□ 1.19
SRGAP2-204ENST00000579225 SNRPA1P09661 255 aaKnown RBP22.46■■□□□ 1.19
SRGAP2-204ENST00000579225 HSPA1AP0DMV8 641 aaKnown RBP22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 HSPA1BP0DMV9 641 aaKnown RBP22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 CHADLQ6NUI6 762 aa22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 MCM10Q7L590 875 aa22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 NBPF5PQ86XG9 351 aaPredicted RBP22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 TNS4Q8IZW8 715 aa22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 C7orf43Q8WVR3 580 aa22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 RTF1Q92541 710 aaKnown RBP22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 BCORQ6W2J9 1755 aa22.45■■□□□ 1.18
SRGAP2-204ENST00000579225 KLRG2A4D1S0 409 aaPredicted RBP22.43■■□□□ 1.18
SRGAP2-204ENST00000579225 POTEIP0CG38 1075 aa22.43■■□□□ 1.18
SRGAP2-204ENST00000579225 POTEJP0CG39 1038 aa22.43■■□□□ 1.18
SRGAP2-204ENST00000579225 ZNF652Q9Y2D9 606 aa22.43■■□□□ 1.18
SRGAP2-204ENST00000579225 NBPF26B4DH59 902 aa22.42■■□□□ 1.18
SRGAP2-204ENST00000579225 NPR1P16066 1061 aa22.42■■□□□ 1.18
SRGAP2-204ENST00000579225 NBPF10Q6P3W6 841 aaKnown RBP22.42■■□□□ 1.18
SRGAP2-204ENST00000579225 NBPF15Q8N660 670 aa22.42■■□□□ 1.18
SRGAP2-204ENST00000579225 CACNA1SQ13698 1873 aa22.41■■□□□ 1.18
SRGAP2-204ENST00000579225 ARFGEF2Q9Y6D5 1785 aa22.41■■□□□ 1.18
SRGAP2-204ENST00000579225 DCTN1Q14203 1278 aa22.41■■□□□ 1.18
SRGAP2-204ENST00000579225 TPTE2Q6XPS3 522 aa22.41■■□□□ 1.18
SRGAP2-204ENST00000579225 CREBZFQ9NS37 354 aa22.41■■□□□ 1.18
SRGAP2-204ENST00000579225 RGL2O15211 777 aa22.4■■□□□ 1.18
SRGAP2-204ENST00000579225 CCDC93Q567U6 631 aa22.4■■□□□ 1.18
SRGAP2-204ENST00000579225 NIP7Q9Y221 180 aaKnown RBP eCLIP22.4■■□□□ 1.18
SRGAP2-204ENST00000579225 HTATSF1O43719 755 aaKnown RBP22.39■■□□□ 1.17
SRGAP2-204ENST00000579225 CAPN15O75808 1086 aa22.39■■□□□ 1.17
SRGAP2-204ENST00000579225 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.17
SRGAP2-204ENST00000579225 L3MBTL3Q96JM7 780 aaPredicted RBP22.39■■□□□ 1.17
SRGAP2-204ENST00000579225 IQCA1LA6NCM1 817 aa22.38■■□□□ 1.17
SRGAP2-204ENST00000579225 FKBP4Q02790 459 aaKnown RBP eCLIP22.37■■□□□ 1.17
SRGAP2-204ENST00000579225 TAF7Q15545 349 aaPredicted RBP22.37■■□□□ 1.17
SRGAP2-204ENST00000579225 HLFQ16534 295 aa22.37■■□□□ 1.17
SRGAP2-204ENST00000579225 TAF1DQ9H5J8 278 aaPredicted RBP22.37■■□□□ 1.17
SRGAP2-204ENST00000579225 MKRN1Q9UHC7 482 aaKnown RBP22.37■■□□□ 1.17
SRGAP2-204ENST00000579225 MAPK8IP3Q9UPT6 1336 aa22.36■■□□□ 1.17
SRGAP2-204ENST00000579225 FAM177BA6PVY3 158 aa22.36■■□□□ 1.17
SRGAP2-204ENST00000579225 OLFM4Q6UX06 510 aa22.36■■□□□ 1.17
SRGAP2-204ENST00000579225 LDHDQ86WU2 507 aa22.36■■□□□ 1.17
SRGAP2-204ENST00000579225 ZNF277Q9NRM2 450 aaPredicted RBP22.36■■□□□ 1.17
SRGAP2-204ENST00000579225 RTKN2Q8IZC4 609 aa22.35■■□□□ 1.17
SRGAP2-204ENST00000579225 MIS18AQ9NYP9 233 aa22.35■■□□□ 1.17
SRGAP2-204ENST00000579225 PASKQ96RG2 1323 aa22.34■■□□□ 1.17
SRGAP2-204ENST00000579225 ALDH1B1P30837 517 aa22.34■■□□□ 1.17
SRGAP2-204ENST00000579225 SCN4AP35499 1836 aa22.34■■□□□ 1.17
SRGAP2-204ENST00000579225 ZNF541Q9H0D2 1346 aa22.33■■□□□ 1.17
SRGAP2-204ENST00000579225 GTF2E1P29083 439 aaPredicted RBP22.32■■□□□ 1.16
SRGAP2-204ENST00000579225 ITGBL1O95965 494 aaPredicted RBP22.31■■□□□ 1.16
SRGAP2-204ENST00000579225 SYNE4Q8N205 404 aa22.31■■□□□ 1.16
SRGAP2-204ENST00000579225 PLEKHF1Q96S99 279 aa22.31■■□□□ 1.16
SRGAP2-204ENST00000579225 HACL1Q9UJ83 578 aa22.31■■□□□ 1.16
SRGAP2-204ENST00000579225 CNTNAP1P78357 1384 aa22.3■■□□□ 1.16
SRGAP2-204ENST00000579225 FZD9O00144 591 aa22.3■■□□□ 1.16
SRGAP2-204ENST00000579225 IARSP41252 1262 aaKnown RBP22.3■■□□□ 1.16
SRGAP2-204ENST00000579225 EAPPQ56P03 285 aaPredicted RBP22.3■■□□□ 1.16
SRGAP2-204ENST00000579225 ERVV-1B6SEH8 477 aa22.29■■□□□ 1.16
SRGAP2-204ENST00000579225 LMOD3Q0VAK6 560 aa22.29■■□□□ 1.16
SRGAP2-204ENST00000579225 CRY2Q49AN0 593 aa22.29■■□□□ 1.16
SRGAP2-204ENST00000579225 NGEFQ8N5V2 710 aa22.29■■□□□ 1.16
SRGAP2-204ENST00000579225 TMEM88BA6NKF7 163 aa22.28■■□□□ 1.16
SRGAP2-204ENST00000579225 EPHX2P34913 555 aa22.28■■□□□ 1.16
SRGAP2-204ENST00000579225 NFE2L2Q16236 605 aa22.28■■□□□ 1.16
SRGAP2-204ENST00000579225 PNISRQ8TF01 805 aaKnown RBP22.28■■□□□ 1.16
SRGAP2-204ENST00000579225 NYXQ9GZU5 481 aa22.28■■□□□ 1.16
SRGAP2-204ENST00000579225 CLEC11AQ9Y240 323 aa22.28■■□□□ 1.16
SRGAP2-204ENST00000579225 NUTM1Q86Y26 1132 aa22.27■■□□□ 1.16
SRGAP2-204ENST00000579225 RUNDC1Q96C34 613 aa22.27■■□□□ 1.16
SRGAP2-204ENST00000579225 PSMD1Q99460 953 aa22.27■■□□□ 1.16
SRGAP2-204ENST00000579225 SNED1Q8TER0 1413 aa22.26■■□□□ 1.15
SRGAP2-204ENST00000579225 FOXN1O15353 648 aa22.26■■□□□ 1.15
SRGAP2-204ENST00000579225 PNMA8AQ86V59 439 aaPredicted RBP22.26■■□□□ 1.15
SRGAP2-204ENST00000579225 GPC2Q8N158 579 aa22.26■■□□□ 1.15
SRGAP2-204ENST00000579225 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
SRGAP2-204ENST00000579225 RNF123Q5XPI4 1314 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms