RNA–Protein interactions for RNA: ENST00000579128.1

TYMS-204, Transcript of thymidylate synthetase, humanhuman

TSL 2

Gene TYMS, Length 925 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TYMS-204ENST00000579128 NBPF10Q6P3W6 841 aaKnown RBP16.65■□□□□ 0.26
TYMS-204ENST00000579128 NBPF15Q8N660 670 aa16.65■□□□□ 0.26
TYMS-204ENST00000579128 ZNF622Q969S3 477 aaKnown RBP eCLIP16.65■□□□□ 0.26
TYMS-204ENST00000579128 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
TYMS-204ENST00000579128 SCN7AQ01118 1682 aa16.65■□□□□ 0.26
TYMS-204ENST00000579128 KDM2BQ8NHM5 1336 aa16.65■□□□□ 0.26
TYMS-204ENST00000579128 NYXQ9GZU5 481 aa16.64■□□□□ 0.25
TYMS-204ENST00000579128 RNF181Q9P0P0 153 aa16.64■□□□□ 0.25
TYMS-204ENST00000579128 LMNB1P20700 586 aa16.63■□□□□ 0.25
TYMS-204ENST00000579128 PIP4K2AP48426 406 aaPredicted RBP16.63■□□□□ 0.25
TYMS-204ENST00000579128 STYK1Q6J9G0 422 aa16.63■□□□□ 0.25
TYMS-204ENST00000579128 MASTLQ96GX5 879 aa16.63■□□□□ 0.25
TYMS-204ENST00000579128 THUMPD2Q9BTF0 503 aaKnown RBP16.63■□□□□ 0.25
TYMS-204ENST00000579128 RRP7AQ9Y3A4 280 aaKnown RBP16.63■□□□□ 0.25
TYMS-204ENST00000579128 C16orf71Q8IYS4 520 aaPredicted RBP16.62■□□□□ 0.25
TYMS-204ENST00000579128 CALD1Q05682 793 aaKnown RBP16.61■□□□□ 0.25
TYMS-204ENST00000579128 NEUROD2Q15784 382 aa16.61■□□□□ 0.25
TYMS-204ENST00000579128 MAP3K15Q6ZN16 1313 aa16.61■□□□□ 0.25
TYMS-204ENST00000579128 KDM3BQ7LBC6 1761 aa16.61■□□□□ 0.25
TYMS-204ENST00000579128 LAMB4A4D0S4 1761 aa16.6■□□□□ 0.25
TYMS-204ENST00000579128 TOMM70O94826 608 aa16.6■□□□□ 0.25
TYMS-204ENST00000579128 SRGNP10124 158 aa16.6■□□□□ 0.25
TYMS-204ENST00000579128 MYL6BP14649 208 aa16.6■□□□□ 0.25
TYMS-204ENST00000579128 NPR1P16066 1061 aa16.6■□□□□ 0.25
TYMS-204ENST00000579128 NGEFQ8N5V2 710 aa16.6■□□□□ 0.25
TYMS-204ENST00000579128 ADAMTS8Q9UP79 889 aa16.6■□□□□ 0.25
TYMS-204ENST00000579128 CEP350Q5VT06 3117 aa16.6■□□□□ 0.25
TYMS-204ENST00000579128 BCORQ6W2J9 1755 aa16.59■□□□□ 0.25
TYMS-204ENST00000579128 DLEC1Q9Y238 1755 aa16.59■□□□□ 0.25
TYMS-204ENST00000579128 ALDH1B1P30837 517 aa16.59■□□□□ 0.25
TYMS-204ENST00000579128 CCDC146Q8IYE0 955 aa16.59■□□□□ 0.25
TYMS-204ENST00000579128 CHMP4AQ9BY43 222 aa16.59■□□□□ 0.25
TYMS-204ENST00000579128 KIF3CO14782 793 aa16.58■□□□□ 0.24
TYMS-204ENST00000579128 EIF2S2P20042 333 aaKnown RBP16.58■□□□□ 0.24
TYMS-204ENST00000579128 DPY19L2Q6NUT2 758 aa16.58■□□□□ 0.24
TYMS-204ENST00000579128 KLRG2A4D1S0 409 aaPredicted RBP16.57■□□□□ 0.24
TYMS-204ENST00000579128 CHL1O00533 1208 aa16.57■□□□□ 0.24
TYMS-204ENST00000579128 C21orf2O43822 256 aa16.57■□□□□ 0.24
TYMS-204ENST00000579128 PARP10Q53GL7 1025 aa16.57■□□□□ 0.24
TYMS-204ENST00000579128 HSP90AB3PQ58FF7 597 aa16.57■□□□□ 0.24
TYMS-204ENST00000579128 PPP1R42Q7Z4L9 355 aa16.57■□□□□ 0.24
TYMS-204ENST00000579128 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
TYMS-204ENST00000579128 LTBP3Q9NS15 1303 aa16.56■□□□□ 0.24
TYMS-204ENST00000579128 HOXB7P09629 217 aa16.56■□□□□ 0.24
TYMS-204ENST00000579128 HLFQ16534 295 aa16.56■□□□□ 0.24
TYMS-204ENST00000579128 PRPF40BQ6NWY9 871 aaKnown RBP16.56■□□□□ 0.24
TYMS-204ENST00000579128 GIGYF2Q6Y7W6 1299 aaKnown RBP16.56■□□□□ 0.24
TYMS-204ENST00000579128 TAOK3Q9H2K8 898 aa16.56■□□□□ 0.24
TYMS-204ENST00000579128 LAS1LQ9Y4W2 734 aaKnown RBP16.56■□□□□ 0.24
TYMS-204ENST00000579128 IBTKQ9P2D0 1353 aaPredicted RBP16.55■□□□□ 0.24
TYMS-204ENST00000579128 HSPA6P17066 643 aa16.55■□□□□ 0.24
TYMS-204ENST00000579128 CFAP44Q96MT7 982 aa16.55■□□□□ 0.24
TYMS-204ENST00000579128 GLTPD2A6NH11 291 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 FAM177BA6PVY3 158 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 RASSF7Q02833 373 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 GRIPAP1Q4V328 841 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 CCDC93Q567U6 631 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 CC2D2BQ6DHV5 1058 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 TTLL7Q6ZT98 887 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 RTKN2Q8IZC4 609 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 RBM46Q8TBY0 533 aaKnown RBP16.54■□□□□ 0.24
TYMS-204ENST00000579128 ZBTB3Q9H5J0 574 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 TRIM35Q9UPQ4 493 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 SBF1O95248 1867 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 ANKRD31Q8N7Z5 1873 aa16.54■□□□□ 0.24
TYMS-204ENST00000579128 RNF123Q5XPI4 1314 aa16.53■□□□□ 0.24
TYMS-204ENST00000579128 NFKBIEO00221 500 aa16.53■□□□□ 0.24
TYMS-204ENST00000579128 ERFEQ4G0M1 354 aa16.53■□□□□ 0.24
TYMS-204ENST00000579128 TMX4Q9H1E5 349 aaPredicted RBP16.53■□□□□ 0.24
TYMS-204ENST00000579128 NMRK2Q9NPI5 230 aa16.53■□□□□ 0.24
TYMS-204ENST00000579128 DDX21Q9NR30 783 aaKnown RBP eCLIP16.53■□□□□ 0.24
TYMS-204ENST00000579128 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
TYMS-204ENST00000579128 VEGFAP15692 232 aaPredicted RBP16.52■□□□□ 0.24
TYMS-204ENST00000579128 GNAI1P63096 354 aa16.52■□□□□ 0.24
TYMS-204ENST00000579128 FSTL1Q12841 308 aa16.52■□□□□ 0.24
TYMS-204ENST00000579128 ZNF34Q8IZ26 560 aa16.52■□□□□ 0.24
TYMS-204ENST00000579128 RPGRQ92834 1020 aaKnown RBP16.52■□□□□ 0.24
TYMS-204ENST00000579128 GPTP24298 496 aa16.51■□□□□ 0.23
TYMS-204ENST00000579128 APLP1P51693 650 aa16.51■□□□□ 0.23
TYMS-204ENST00000579128 PDIA6Q15084 440 aa16.51■□□□□ 0.23
TYMS-204ENST00000579128 NLRP3Q96P20 1036 aa16.51■□□□□ 0.23
TYMS-204ENST00000579128 RRAGCQ9HB90 399 aa16.51■□□□□ 0.23
TYMS-204ENST00000579128 IFT57Q9NWB7 429 aa16.51■□□□□ 0.23
TYMS-204ENST00000579128 DBF4Q9UBU7 674 aaPredicted RBP16.51■□□□□ 0.23
TYMS-204ENST00000579128 NUP98P52948 1817 aa16.5■□□□□ 0.23
TYMS-204ENST00000579128 ZNF316A6NFI3 1004 aaPredicted RBP16.5■□□□□ 0.23
TYMS-204ENST00000579128 APAF1O14727 1248 aa16.5■□□□□ 0.23
TYMS-204ENST00000579128 ANP32CO43423 234 aa16.5■□□□□ 0.23
TYMS-204ENST00000579128 CRY2Q49AN0 593 aa16.5■□□□□ 0.23
TYMS-204ENST00000579128 HDGFL1Q5TGJ6 251 aa16.5■□□□□ 0.23
TYMS-204ENST00000579128 COPS6Q7L5N1 327 aa16.5■□□□□ 0.23
TYMS-204ENST00000579128 UTP14AQ9BVJ6 771 aaKnown RBP16.5■□□□□ 0.23
TYMS-204ENST00000579128 HYPKQ9NX55 129 aa16.5■□□□□ 0.23
TYMS-204ENST00000579128 RIC1Q4ADV7 1423 aa16.5■□□□□ 0.23
TYMS-204ENST00000579128 C7orf43Q8WVR3 580 aa16.49■□□□□ 0.23
TYMS-204ENST00000579128 RBM17Q96I25 401 aaKnown RBP16.49■□□□□ 0.23
TYMS-204ENST00000579128 HOXA10P31260 410 aaPredicted RBP16.48■□□□□ 0.23
TYMS-204ENST00000579128 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
TYMS-204ENST00000579128 AIMP1Q12904 312 aaKnown RBP16.48■□□□□ 0.23
TYMS-204ENST00000579128 SUSD4Q5VX71 490 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms