RNA–Protein interactions for RNA: ENST00000578861.5

SNX11-205, Transcript of sorting nexin 11, humanhuman

TSL 4

Gene SNX11, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-205ENST00000578861 CARD14Q9BXL6 1004 aa12.21□□□□□ -0.45
SNX11-205ENST00000578861 EMILIN1Q9Y6C2 1016 aa12.21□□□□□ -0.45
SNX11-205ENST00000578861 SCN4AP35499 1836 aa12.21□□□□□ -0.46
SNX11-205ENST00000578861 HSP90AB1P08238 724 aaKnown RBP12.2□□□□□ -0.46
SNX11-205ENST00000578861 EIF6P56537 245 aaKnown RBP12.2□□□□□ -0.46
SNX11-205ENST00000578861 STYK1Q6J9G0 422 aa12.2□□□□□ -0.46
SNX11-205ENST00000578861 OLFM4Q6UX06 510 aa12.2□□□□□ -0.46
SNX11-205ENST00000578861 NFATC2IPQ8NCF5 419 aa12.2□□□□□ -0.46
SNX11-205ENST00000578861 JDP2Q8WYK2 163 aa12.2□□□□□ -0.46
SNX11-205ENST00000578861 HHIPL1Q96JK4 782 aa12.2□□□□□ -0.46
SNX11-205ENST00000578861 EYA1Q99502 592 aa12.2□□□□□ -0.46
SNX11-205ENST00000578861 FZD9O00144 591 aa12.19□□□□□ -0.46
SNX11-205ENST00000578861 TBC1D9BQ66K14 1250 aa12.19□□□□□ -0.46
SNX11-205ENST00000578861 PRR5LQ6MZQ0 368 aa12.19□□□□□ -0.46
SNX11-205ENST00000578861 MASTLQ96GX5 879 aa12.19□□□□□ -0.46
SNX11-205ENST00000578861 GLIS2Q9BZE0 524 aaPredicted RBP12.19□□□□□ -0.46
SNX11-205ENST00000578861 RNF186Q9NXI6 227 aa12.19□□□□□ -0.46
SNX11-205ENST00000578861 HDAC9Q9UKV0 1011 aa12.19□□□□□ -0.46
SNX11-205ENST00000578861 CANXP27824 592 aaKnown RBP12.18□□□□□ -0.46
SNX11-205ENST00000578861 IARSP41252 1262 aaKnown RBP12.18□□□□□ -0.46
SNX11-205ENST00000578861 HUNKP57058 714 aa12.18□□□□□ -0.46
SNX11-205ENST00000578861 KIF23Q02241 960 aaPredicted RBP12.18□□□□□ -0.46
SNX11-205ENST00000578861 TRIM26Q12899 539 aaPredicted RBP12.18□□□□□ -0.46
SNX11-205ENST00000578861 USP50Q70EL3 339 aaPredicted RBP12.18□□□□□ -0.46
SNX11-205ENST00000578861 POLR3GLQ9BT43 218 aa12.18□□□□□ -0.46
SNX11-205ENST00000578861 SAGE1Q9NXZ1 904 aa12.18□□□□□ -0.46
SNX11-205ENST00000578861 COLQQ9Y215 455 aaPredicted RBP12.18□□□□□ -0.46
SNX11-205ENST00000578861 MYH14Q7Z406 1995 aaKnown RBP12.18□□□□□ -0.46
SNX11-205ENST00000578861 COL15A1P39059 1388 aa12.18□□□□□ -0.46
SNX11-205ENST00000578861 ANKRD26Q9UPS8 1709 aa12.17□□□□□ -0.46
SNX11-205ENST00000578861 SRGNP10124 158 aa12.17□□□□□ -0.46
SNX11-205ENST00000578861 MTHFSP49914 203 aa12.17□□□□□ -0.46
SNX11-205ENST00000578861 RTKN2Q8IZC4 609 aa12.17□□□□□ -0.46
SNX11-205ENST00000578861 ADAMTSL1Q8N6G6 1762 aa12.17□□□□□ -0.46
SNX11-205ENST00000578861 KIF24Q5T7B8 1368 aa12.17□□□□□ -0.46
SNX11-205ENST00000578861 DICER1Q9UPY3 1922 aaKnown RBP12.16□□□□□ -0.46
SNX11-205ENST00000578861 SCNN1DP51172 638 aa12.16□□□□□ -0.46
SNX11-205ENST00000578861 ST5P78524 1137 aa12.16□□□□□ -0.46
SNX11-205ENST00000578861 ZNF530Q6P9A1 599 aaPredicted RBP12.16□□□□□ -0.46
SNX11-205ENST00000578861 CNBD1Q8NA66 436 aa12.16□□□□□ -0.46
SNX11-205ENST00000578861 ZBTB1Q9Y2K1 713 aa12.16□□□□□ -0.46
SNX11-205ENST00000578861 ZNF330Q9Y3S2 320 aaPredicted RBP12.16□□□□□ -0.46
SNX11-205ENST00000578861 CYP19A1P11511 503 aaPredicted RBP12.15□□□□□ -0.46
SNX11-205ENST00000578861 TNNT2P45379 298 aaPredicted RBP12.15□□□□□ -0.46
SNX11-205ENST00000578861 PKN2Q16513 984 aaKnown RBP12.15□□□□□ -0.46
SNX11-205ENST00000578861 C7orf43Q8WVR3 580 aa12.15□□□□□ -0.46
SNX11-205ENST00000578861 FER1L6Q2WGJ9 1857 aa12.14□□□□□ -0.47
SNX11-205ENST00000578861 COL5A3P25940 1745 aaPredicted RBP12.14□□□□□ -0.47
SNX11-205ENST00000578861 PLEKHO1Q53GL0 409 aaPredicted RBP12.14□□□□□ -0.47
SNX11-205ENST00000578861 DLEC1Q9Y238 1755 aa12.13□□□□□ -0.47
SNX11-205ENST00000578861 ZNF157P51786 506 aaPredicted RBP12.13□□□□□ -0.47
SNX11-205ENST00000578861 C1orf141Q5JVX7 400 aa12.13□□□□□ -0.47
SNX11-205ENST00000578861 RGMBQ6NW40 437 aa12.13□□□□□ -0.47
SNX11-205ENST00000578861 SETDB2Q96T68 719 aa12.13□□□□□ -0.47
SNX11-205ENST00000578861 AFDNP55196 1824 aaKnown RBP12.13□□□□□ -0.47
SNX11-205ENST00000578861 WASHC2AQ641Q2 1341 aa12.12□□□□□ -0.47
SNX11-205ENST00000578861 A0A0C4DFX4 3053 aa12.12□□□□□ -0.47
SNX11-205ENST00000578861 CCDC102AQ96A19 550 aa12.12□□□□□ -0.47
SNX11-205ENST00000578861 PCGF6Q9BYE7 350 aa12.12□□□□□ -0.47
SNX11-205ENST00000578861 ADARB2Q9NS39 739 aaKnown RBP12.12□□□□□ -0.47
SNX11-205ENST00000578861 POLKQ9UBT6 870 aa12.12□□□□□ -0.47
SNX11-205ENST00000578861 TBC1D2BQ9UPU7 963 aa12.12□□□□□ -0.47
SNX11-205ENST00000578861 NCAPD2Q15021 1401 aa12.11□□□□□ -0.47
SNX11-205ENST00000578861 CUL9Q8IWT3 2517 aa12.11□□□□□ -0.47
SNX11-205ENST00000578861 A0A087WZG4 1122 aa12.11□□□□□ -0.47
SNX11-205ENST00000578861 FAM155AB1AL88 458 aaPredicted RBP12.11□□□□□ -0.47
SNX11-205ENST00000578861 NPR1P16066 1061 aa12.11□□□□□ -0.47
SNX11-205ENST00000578861 DLK2Q6UY11 383 aa12.11□□□□□ -0.47
SNX11-205ENST00000578861 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
SNX11-205ENST00000578861 LARGE2Q8N3Y3 721 aa12.11□□□□□ -0.47
SNX11-205ENST00000578861 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
SNX11-205ENST00000578861 SLX4Q8IY92 1834 aa12.1□□□□□ -0.47
SNX11-205ENST00000578861 SLC39A6Q13433 755 aa12.1□□□□□ -0.47
SNX11-205ENST00000578861 EIF4A2Q14240 407 aaKnown RBP12.1□□□□□ -0.47
SNX11-205ENST00000578861 CDC37L1Q7L3B6 337 aa12.1□□□□□ -0.47
SNX11-205ENST00000578861 CSRNP1Q96S65 589 aa12.1□□□□□ -0.47
SNX11-205ENST00000578861 NRXN2Q9P2S2 1712 aa12.1□□□□□ -0.47
SNX11-205ENST00000578861 POTEFA5A3E0 1075 aa12.09□□□□□ -0.47
SNX11-205ENST00000578861 FBXO46Q6PJ61 603 aaPredicted RBP12.09□□□□□ -0.47
SNX11-205ENST00000578861 ZNF296Q8WUU4 475 aaPredicted RBP12.09□□□□□ -0.47
SNX11-205ENST00000578861 GPRC5DQ9NZD1 345 aa12.09□□□□□ -0.47
SNX11-205ENST00000578861 TBC1D8O95759 1140 aa12.08□□□□□ -0.48
SNX11-205ENST00000578861 NPM2Q86SE8 214 aaKnown RBP12.08□□□□□ -0.48
SNX11-205ENST00000578861 NBPF5PQ86XG9 351 aaPredicted RBP12.08□□□□□ -0.48
SNX11-205ENST00000578861 C2orf69Q8N8R5 385 aa12.08□□□□□ -0.48
SNX11-205ENST00000578861 AMOTQ4VCS5 1084 aa12.07□□□□□ -0.48
SNX11-205ENST00000578861 NIM1KQ8IY84 436 aa12.07□□□□□ -0.48
SNX11-205ENST00000578861 TIMELESSQ9UNS1 1208 aa12.07□□□□□ -0.48
SNX11-205ENST00000578861 EIF5P55010 431 aaKnown RBP12.06□□□□□ -0.48
SNX11-205ENST00000578861 PANK3Q9H999 370 aa12.06□□□□□ -0.48
SNX11-205ENST00000578861 GBA2Q9HCG7 927 aaPredicted RBP12.06□□□□□ -0.48
SNX11-205ENST00000578861 ADAMTS7Q9UKP4 1686 aa12.06□□□□□ -0.48
SNX11-205ENST00000578861 PITPNM2Q9BZ72 1349 aa12.06□□□□□ -0.48
SNX11-205ENST00000578861 FAM177BA6PVY3 158 aa12.05□□□□□ -0.48
SNX11-205ENST00000578861 TCERG1O14776 1098 aaKnown RBP12.05□□□□□ -0.48
SNX11-205ENST00000578861 STARD3NLO95772 234 aa12.05□□□□□ -0.48
SNX11-205ENST00000578861 GMPSP49915 693 aaPredicted RBP12.05□□□□□ -0.48
SNX11-205ENST00000578861 MNX1P50219 401 aaPredicted RBP12.05□□□□□ -0.48
SNX11-205ENST00000578861 PSMD1Q99460 953 aa12.05□□□□□ -0.48
SNX11-205ENST00000578861 BCL2L13Q9BXK5 485 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms