RNA–Protein interactions for RNA: ENST00000578609.1

SLC6A4-204, Transcript of solute carrier family 6 member 4, humanhuman

TSL 4

Gene SLC6A4, Length 566 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-204ENST00000578609 ANXA1P04083 346 aa19.73■□□□□ 0.75
SLC6A4-204ENST00000578609 GOLGA2Q08379 1002 aa19.73■□□□□ 0.75
SLC6A4-204ENST00000578609 TBC1D9BQ66K14 1250 aa19.73■□□□□ 0.75
SLC6A4-204ENST00000578609 TTLL7Q6ZT98 887 aa19.73■□□□□ 0.75
SLC6A4-204ENST00000578609 ZNF652Q9Y2D9 606 aa19.73■□□□□ 0.75
SLC6A4-204ENST00000578609 CD2APQ9Y5K6 639 aa19.73■□□□□ 0.75
SLC6A4-204ENST00000578609 TWISTNBQ3B726 338 aaPredicted RBP19.72■□□□□ 0.75
SLC6A4-204ENST00000578609 KIF6Q6ZMV9 814 aa19.72■□□□□ 0.75
SLC6A4-204ENST00000578609 CHMP4AQ9BY43 222 aa19.72■□□□□ 0.75
SLC6A4-204ENST00000578609 ATP10DQ9P241 1426 aa19.72■□□□□ 0.75
SLC6A4-204ENST00000578609 CARMIL3Q8ND23 1372 aa19.71■□□□□ 0.75
SLC6A4-204ENST00000578609 E9PSI1 815 aa19.71■□□□□ 0.75
SLC6A4-204ENST00000578609 KIAA1551Q9HCM1 1747 aa19.71■□□□□ 0.75
SLC6A4-204ENST00000578609 EXOSC9Q06265 439 aaKnown RBP19.7■□□□□ 0.74
SLC6A4-204ENST00000578609 HLFQ16534 295 aa19.7■□□□□ 0.74
SLC6A4-204ENST00000578609 CCDC30Q5VVM6 783 aa19.7■□□□□ 0.74
SLC6A4-204ENST00000578609 KLHL34Q8N239 644 aa19.7■□□□□ 0.74
SLC6A4-204ENST00000578609 HYPKQ9NX55 129 aa19.7■□□□□ 0.74
SLC6A4-204ENST00000578609 AFDNP55196 1824 aaKnown RBP19.69■□□□□ 0.74
SLC6A4-204ENST00000578609 COPS6Q7L5N1 327 aa19.69■□□□□ 0.74
SLC6A4-204ENST00000578609 NLGN2Q8NFZ4 835 aa19.69■□□□□ 0.74
SLC6A4-204ENST00000578609 XAGE3Q8WTP9 111 aa19.69■□□□□ 0.74
SLC6A4-204ENST00000578609 ZBTB3Q9H5J0 574 aa19.69■□□□□ 0.74
SLC6A4-204ENST00000578609 SERPINB2P05120 415 aa19.68■□□□□ 0.74
SLC6A4-204ENST00000578609 SLFN5Q08AF3 891 aa19.68■□□□□ 0.74
SLC6A4-204ENST00000578609 BICDL1Q6ZP65 573 aa19.68■□□□□ 0.74
SLC6A4-204ENST00000578609 PXDNLA1KZ92 1463 aa19.67■□□□□ 0.74
SLC6A4-204ENST00000578609 NUP98P52948 1817 aa19.67■□□□□ 0.74
SLC6A4-204ENST00000578609 VAMP4O75379 141 aa19.67■□□□□ 0.74
SLC6A4-204ENST00000578609 GIGYF2Q6Y7W6 1299 aaKnown RBP19.67■□□□□ 0.74
SLC6A4-204ENST00000578609 SETDB2Q96T68 719 aa19.67■□□□□ 0.74
SLC6A4-204ENST00000578609 TRMT2AQ8IZ69 625 aaKnown RBP19.66■□□□□ 0.74
SLC6A4-204ENST00000578609 ANKRD36CQ5JPF3 1778 aa19.65■□□□□ 0.74
SLC6A4-204ENST00000578609 AIMP1Q12904 312 aaKnown RBP19.65■□□□□ 0.74
SLC6A4-204ENST00000578609 CDCA7LQ96GN5 454 aa19.65■□□□□ 0.74
SLC6A4-204ENST00000578609 NIP7Q9Y221 180 aaKnown RBP eCLIP19.65■□□□□ 0.74
SLC6A4-204ENST00000578609 IBTKQ9P2D0 1353 aaPredicted RBP19.65■□□□□ 0.74
SLC6A4-204ENST00000578609 HNRNPUQ00839 825 aaKnown RBP eCLIP19.64■□□□□ 0.73
SLC6A4-204ENST00000578609 PLBD2Q8NHP8 589 aa19.64■□□□□ 0.73
SLC6A4-204ENST00000578609 STK31Q9BXU1 1019 aa19.64■□□□□ 0.73
SLC6A4-204ENST00000578609 UBN2Q6ZU65 1347 aa19.64■□□□□ 0.73
SLC6A4-204ENST00000578609 ARFGEF2Q9Y6D5 1785 aa19.64■□□□□ 0.73
SLC6A4-204ENST00000578609 TGFB2P61812 414 aa19.63■□□□□ 0.73
SLC6A4-204ENST00000578609 PRR5LQ6MZQ0 368 aa19.63■□□□□ 0.73
SLC6A4-204ENST00000578609 ZNF34Q8IZ26 560 aa19.63■□□□□ 0.73
SLC6A4-204ENST00000578609 CNBD1Q8NA66 436 aa19.63■□□□□ 0.73
SLC6A4-204ENST00000578609 PHAXQ9H814 394 aaKnown RBP19.63■□□□□ 0.73
SLC6A4-204ENST00000578609 HSP90AB3PQ58FF7 597 aa19.62■□□□□ 0.73
SLC6A4-204ENST00000578609 ANKRD31Q8N7Z5 1873 aa19.62■□□□□ 0.73
SLC6A4-204ENST00000578609 ANKRD13DQ6ZTN6 518 aa19.61■□□□□ 0.73
SLC6A4-204ENST00000578609 NBPF5PQ86XG9 351 aaPredicted RBP19.61■□□□□ 0.73
SLC6A4-204ENST00000578609 ZBED9Q6R2W3 1325 aa19.6■□□□□ 0.73
SLC6A4-204ENST00000578609 TCERG1O14776 1098 aaKnown RBP19.6■□□□□ 0.73
SLC6A4-204ENST00000578609 GPTP24298 496 aa19.6■□□□□ 0.73
SLC6A4-204ENST00000578609 PARP10Q53GL7 1025 aa19.6■□□□□ 0.73
SLC6A4-204ENST00000578609 N4BP2Q86UW6 1770 aaPredicted RBP19.6■□□□□ 0.73
SLC6A4-204ENST00000578609 DLEC1Q9Y238 1755 aa19.6■□□□□ 0.73
SLC6A4-204ENST00000578609 RIC1Q4ADV7 1423 aa19.59■□□□□ 0.73
SLC6A4-204ENST00000578609 BRCA1P38398 1863 aaKnown RBP19.59■□□□□ 0.73
SLC6A4-204ENST00000578609 SLC4A2P04920 1241 aa19.59■□□□□ 0.73
SLC6A4-204ENST00000578609 TCIRG1Q13488 830 aa19.59■□□□□ 0.73
SLC6A4-204ENST00000578609 DDX58O95786 925 aaKnown RBP19.58■□□□□ 0.72
SLC6A4-204ENST00000578609 DPEP1P16444 411 aa19.58■□□□□ 0.72
SLC6A4-204ENST00000578609 ST5P78524 1137 aa19.58■□□□□ 0.72
SLC6A4-204ENST00000578609 TPTE2Q6XPS3 522 aa19.58■□□□□ 0.72
SLC6A4-204ENST00000578609 BRIP1Q9BX63 1249 aa19.58■□□□□ 0.72
SLC6A4-204ENST00000578609 NYXQ9GZU5 481 aa19.58■□□□□ 0.72
SLC6A4-204ENST00000578609 COL11A2P13942 1736 aaPredicted RBP19.58■□□□□ 0.72
SLC6A4-204ENST00000578609 ADCY9O60503 1353 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 CACNA1FO60840 1977 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 RNF123Q5XPI4 1314 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 NTSR2O95665 410 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 SUSD4Q5VX71 490 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 G2E3Q7L622 706 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 ZNF428Q96B54 188 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 ISCA1Q9BUE6 129 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 ABCC12Q96J65 1359 aa19.57■□□□□ 0.72
SLC6A4-204ENST00000578609 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
SLC6A4-204ENST00000578609 A0A0G2JLW4 131 aa19.56■□□□□ 0.72
SLC6A4-204ENST00000578609 NPHP1O15259 732 aa19.56■□□□□ 0.72
SLC6A4-204ENST00000578609 CT47B1P0C2W7 299 aaPredicted RBP19.56■□□□□ 0.72
SLC6A4-204ENST00000578609 KCNA3P22001 575 aa19.56■□□□□ 0.72
SLC6A4-204ENST00000578609 FLIIQ13045 1269 aa19.56■□□□□ 0.72
SLC6A4-204ENST00000578609 RIC3Q7Z5B4 369 aa19.56■□□□□ 0.72
SLC6A4-204ENST00000578609 NLRP10Q86W26 655 aa19.56■□□□□ 0.72
SLC6A4-204ENST00000578609 CHRNA5P30532 468 aa19.55■□□□□ 0.72
SLC6A4-204ENST00000578609 PDE6BP35913 854 aa19.55■□□□□ 0.72
SLC6A4-204ENST00000578609 TRIM28Q13263 835 aaKnown RBP19.55■□□□□ 0.72
SLC6A4-204ENST00000578609 KSR2Q6VAB6 950 aa19.55■□□□□ 0.72
SLC6A4-204ENST00000578609 PPP1R42Q7Z4L9 355 aa19.55■□□□□ 0.72
SLC6A4-204ENST00000578609 CCDC24Q8N4L8 307 aa19.55■□□□□ 0.72
SLC6A4-204ENST00000578609 PDZRN3Q9UPQ7 1066 aa19.55■□□□□ 0.72
SLC6A4-204ENST00000578609 FAM177BA6PVY3 158 aa19.54■□□□□ 0.72
SLC6A4-204ENST00000578609 KLRG2A4D1S0 409 aaPredicted RBP19.53■□□□□ 0.72
SLC6A4-204ENST00000578609 PI4KAP2A4QPH2 592 aa19.53■□□□□ 0.72
SLC6A4-204ENST00000578609 YBX3P16989 372 aaKnown RBP eCLIP19.53■□□□□ 0.72
SLC6A4-204ENST00000578609 NUTM1Q86Y26 1132 aa19.53■□□□□ 0.72
SLC6A4-204ENST00000578609 C2CD5Q86YS7 1000 aa19.53■□□□□ 0.72
SLC6A4-204ENST00000578609 PI4KAP1Q8N8J0 262 aa19.53■□□□□ 0.72
SLC6A4-204ENST00000578609 METTL22Q9BUU2 404 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms