RNA–Protein interactions for RNA: ENST00000578397.5

PSMD11-207, Transcript of proteasome 26S subunit, non-ATPase 11, humanhuman

TSL 2

Gene PSMD11, Length 1,178 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD11-207ENST00000578397 SCN7AQ01118 1682 aa18.38■□□□□ 0.53
PSMD11-207ENST00000578397 AFDNP55196 1824 aaKnown RBP18.38■□□□□ 0.53
PSMD11-207ENST00000578397 ARFGEF1Q9Y6D6 1849 aa18.38■□□□□ 0.53
PSMD11-207ENST00000578397 NBPF26B4DH59 902 aa18.38■□□□□ 0.53
PSMD11-207ENST00000578397 NBPF10Q6P3W6 841 aaKnown RBP18.38■□□□□ 0.53
PSMD11-207ENST00000578397 NBPF15Q8N660 670 aa18.38■□□□□ 0.53
PSMD11-207ENST00000578397 CNBD1Q8NA66 436 aa18.38■□□□□ 0.53
PSMD11-207ENST00000578397 EIF4A1P60842 406 aaKnown RBP18.37■□□□□ 0.53
PSMD11-207ENST00000578397 THUMPD2Q9BTF0 503 aaKnown RBP18.37■□□□□ 0.53
PSMD11-207ENST00000578397 KIF3CO14782 793 aa18.36■□□□□ 0.53
PSMD11-207ENST00000578397 NPHP1O15259 732 aa18.36■□□□□ 0.53
PSMD11-207ENST00000578397 RIPK4P57078 832 aa18.36■□□□□ 0.53
PSMD11-207ENST00000578397 ST5P78524 1137 aa18.36■□□□□ 0.53
PSMD11-207ENST00000578397 RNF181Q9P0P0 153 aa18.36■□□□□ 0.53
PSMD11-207ENST00000578397 LMOD3Q0VAK6 560 aa18.35■□□□□ 0.53
PSMD11-207ENST00000578397 POTEHQ6S545 545 aa18.35■□□□□ 0.53
PSMD11-207ENST00000578397 BABAM1Q9NWV8 329 aa18.35■□□□□ 0.53
PSMD11-207ENST00000578397 TMPOP42166 694 aaKnown RBP18.34■□□□□ 0.53
PSMD11-207ENST00000578397 NBPF5PQ86XG9 351 aaPredicted RBP18.34■□□□□ 0.53
PSMD11-207ENST00000578397 ZNF622Q969S3 477 aaKnown RBP eCLIP18.34■□□□□ 0.531e-8■□□□□ 9.8
PSMD11-207ENST00000578397 CCDC24Q8N4L8 307 aa18.33■□□□□ 0.52
PSMD11-207ENST00000578397 TSPYL4Q9UJ04 414 aa18.33■□□□□ 0.52
PSMD11-207ENST00000578397 ZC3H4Q9UPT8 1303 aaKnown RBP18.32■□□□□ 0.52
PSMD11-207ENST00000578397 ERVV-1B6SEH8 477 aa18.32■□□□□ 0.52
PSMD11-207ENST00000578397 LMNB1P20700 586 aa18.32■□□□□ 0.52
PSMD11-207ENST00000578397 WDR43Q15061 677 aaKnown RBP eCLIP18.32■□□□□ 0.52
PSMD11-207ENST00000578397 STYK1Q6J9G0 422 aa18.32■□□□□ 0.52
PSMD11-207ENST00000578397 TPTE2Q6XPS3 522 aa18.32■□□□□ 0.52
PSMD11-207ENST00000578397 CNKSR1Q969H4 720 aa18.32■□□□□ 0.52
PSMD11-207ENST00000578397 NIP7Q9Y221 180 aaKnown RBP eCLIP18.32■□□□□ 0.52
PSMD11-207ENST00000578397 DLG5Q8TDM6 1919 aa18.31■□□□□ 0.52
PSMD11-207ENST00000578397 ERBB4Q15303 1308 aa18.31■□□□□ 0.52
PSMD11-207ENST00000578397 KDM2BQ8NHM5 1336 aa18.31■□□□□ 0.52
PSMD11-207ENST00000578397 SRGNP10124 158 aa18.31■□□□□ 0.52
PSMD11-207ENST00000578397 RASSF7Q02833 373 aa18.31■□□□□ 0.52
PSMD11-207ENST00000578397 BCORQ6W2J9 1755 aa18.3■□□□□ 0.52
PSMD11-207ENST00000578397 TOMM70O94826 608 aa18.3■□□□□ 0.52
PSMD11-207ENST00000578397 HLFQ16534 295 aa18.3■□□□□ 0.52
PSMD11-207ENST00000578397 MASTLQ96GX5 879 aa18.3■□□□□ 0.52
PSMD11-207ENST00000578397 PRKRIP1Q9H875 184 aaPredicted RBP18.3■□□□□ 0.52
PSMD11-207ENST00000578397 NMRK2Q9NPI5 230 aa18.3■□□□□ 0.52
PSMD11-207ENST00000578397 RRP7AQ9Y3A4 280 aaKnown RBP18.3■□□□□ 0.52
PSMD11-207ENST00000578397 KDM3BQ7LBC6 1761 aa18.3■□□□□ 0.52
PSMD11-207ENST00000578397 DLEC1Q9Y238 1755 aa18.3■□□□□ 0.52
PSMD11-207ENST00000578397 NFKBIEO00221 500 aa18.29■□□□□ 0.52
PSMD11-207ENST00000578397 HSPA6P17066 643 aa18.29■□□□□ 0.52
PSMD11-207ENST00000578397 NGEFQ8N5V2 710 aa18.29■□□□□ 0.52
PSMD11-207ENST00000578397 RUNDC1Q96C34 613 aa18.29■□□□□ 0.52
PSMD11-207ENST00000578397 MAP3K15Q6ZN16 1313 aa18.28■□□□□ 0.52
PSMD11-207ENST00000578397 KLRG2A4D1S0 409 aaPredicted RBP18.28■□□□□ 0.52
PSMD11-207ENST00000578397 KIF6Q6ZMV9 814 aa18.28■□□□□ 0.52
PSMD11-207ENST00000578397 ANKRD31Q8N7Z5 1873 aa18.27■□□□□ 0.52
PSMD11-207ENST00000578397 C21orf2O43822 256 aa18.27■□□□□ 0.52
PSMD11-207ENST00000578397 MYL6BP14649 208 aa18.27■□□□□ 0.52
PSMD11-207ENST00000578397 NPR1P16066 1061 aa18.27■□□□□ 0.52
PSMD11-207ENST00000578397 SOGA3Q5TF21 947 aa18.27■□□□□ 0.52
PSMD11-207ENST00000578397 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
PSMD11-207ENST00000578397 ADAMTS8Q9UP79 889 aa18.27■□□□□ 0.52
PSMD11-207ENST00000578397 LAMB4A4D0S4 1761 aa18.27■□□□□ 0.51
PSMD11-207ENST00000578397 GTF2E1P29083 439 aaPredicted RBP18.26■□□□□ 0.51
PSMD11-207ENST00000578397 PRELPP51888 382 aa18.26■□□□□ 0.51
PSMD11-207ENST00000578397 PRPF40BQ6NWY9 871 aaKnown RBP18.26■□□□□ 0.51
PSMD11-207ENST00000578397 TTLL7Q6ZT98 887 aa18.26■□□□□ 0.51
PSMD11-207ENST00000578397 C16orf71Q8IYS4 520 aaPredicted RBP18.26■□□□□ 0.51
PSMD11-207ENST00000578397 NYXQ9GZU5 481 aa18.26■□□□□ 0.51
PSMD11-207ENST00000578397 ZBTB12Q9Y330 459 aaPredicted RBP18.26■□□□□ 0.51
PSMD11-207ENST00000578397 LTBP3Q9NS15 1303 aa18.25■□□□□ 0.51
PSMD11-207ENST00000578397 NEUROD2Q15784 382 aa18.25■□□□□ 0.51
PSMD11-207ENST00000578397 FAM177BA6PVY3 158 aa18.24■□□□□ 0.51
PSMD11-207ENST00000578397 CHL1O00533 1208 aa18.24■□□□□ 0.51
PSMD11-207ENST00000578397 RBM46Q8TBY0 533 aaKnown RBP18.24■□□□□ 0.51
PSMD11-207ENST00000578397 TRIM35Q9UPQ4 493 aa18.24■□□□□ 0.51
PSMD11-207ENST00000578397 SBF1O95248 1867 aa18.23■□□□□ 0.51
PSMD11-207ENST00000578397 GLTPD2A6NH11 291 aa18.23■□□□□ 0.51
PSMD11-207ENST00000578397 EIF2S2P20042 333 aaKnown RBP18.23■□□□□ 0.51
PSMD11-207ENST00000578397 ZEB1P37275 1124 aaPredicted RBP18.23■□□□□ 0.51
PSMD11-207ENST00000578397 PDIA6Q15084 440 aa18.23■□□□□ 0.51
PSMD11-207ENST00000578397 GIGYF2Q6Y7W6 1299 aaKnown RBP18.23■□□□□ 0.51
PSMD11-207ENST00000578397 TAOK3Q9H2K8 898 aa18.23■□□□□ 0.51
PSMD11-207ENST00000578397 ZBTB3Q9H5J0 574 aa18.23■□□□□ 0.51
PSMD11-207ENST00000578397 RRAGCQ9HB90 399 aa18.23■□□□□ 0.51
PSMD11-207ENST00000578397 IBTKQ9P2D0 1353 aaPredicted RBP18.22■□□□□ 0.51
PSMD11-207ENST00000578397 LRP10Q7Z4F1 713 aa18.22■□□□□ 0.51
PSMD11-207ENST00000578397 C7orf43Q8WVR3 580 aa18.22■□□□□ 0.51
PSMD11-207ENST00000578397 COL11A2P13942 1736 aaPredicted RBP18.22■□□□□ 0.51
PSMD11-207ENST00000578397 ALDH1B1P30837 517 aa18.21■□□□□ 0.51
PSMD11-207ENST00000578397 DPY19L2Q6NUT2 758 aa18.21■□□□□ 0.51
PSMD11-207ENST00000578397 ZNF34Q8IZ26 560 aa18.21■□□□□ 0.51
PSMD11-207ENST00000578397 GPTP24298 496 aa18.2■□□□□ 0.5
PSMD11-207ENST00000578397 APLP1P51693 650 aa18.2■□□□□ 0.5
PSMD11-207ENST00000578397 FSTL1Q12841 308 aa18.2■□□□□ 0.5
PSMD11-207ENST00000578397 CRY2Q49AN0 593 aa18.2■□□□□ 0.5
PSMD11-207ENST00000578397 ERFEQ4G0M1 354 aa18.2■□□□□ 0.5
PSMD11-207ENST00000578397 PARP10Q53GL7 1025 aa18.2■□□□□ 0.5
PSMD11-207ENST00000578397 CCDC93Q567U6 631 aa18.2■□□□□ 0.5
PSMD11-207ENST00000578397 LAS1LQ9Y4W2 734 aaKnown RBP18.2■□□□□ 0.5
PSMD11-207ENST00000578397 UBN2Q6ZU65 1347 aa18.2■□□□□ 0.5
PSMD11-207ENST00000578397 VEGFAP15692 232 aaPredicted RBP18.19■□□□□ 0.5
PSMD11-207ENST00000578397 PPP1R42Q7Z4L9 355 aa18.19■□□□□ 0.5
PSMD11-207ENST00000578397 NUTM1Q86Y26 1132 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms