RNA–Protein interactions for RNA: ENST00000578187.1

CCDC57-211, Transcript of coiled-coil domain containing 57, humanhuman

TSL 2

Gene CCDC57, Length 696 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-211ENST00000578187 TRIM35Q9UPQ4 493 aa16.76■□□□□ 0.27
CCDC57-211ENST00000578187 ZNF652Q9Y2D9 606 aa16.76■□□□□ 0.27
CCDC57-211ENST00000578187 A1BGP04217 495 aa16.75■□□□□ 0.27
CCDC57-211ENST00000578187 HSPA6P17066 643 aa16.75■□□□□ 0.27
CCDC57-211ENST00000578187 TBC1D9BQ66K14 1250 aa16.75■□□□□ 0.27
CCDC57-211ENST00000578187 DZIP3Q86Y13 1208 aaKnown RBP16.75■□□□□ 0.27
CCDC57-211ENST00000578187 KIF3CO14782 793 aa16.74■□□□□ 0.27
CCDC57-211ENST00000578187 ST5P78524 1137 aa16.74■□□□□ 0.27
CCDC57-211ENST00000578187 NEUROD2Q15784 382 aa16.74■□□□□ 0.27
CCDC57-211ENST00000578187 APAF1O14727 1248 aa16.73■□□□□ 0.27
CCDC57-211ENST00000578187 TOMM70O94826 608 aa16.73■□□□□ 0.27
CCDC57-211ENST00000578187 CNBD1Q8NA66 436 aa16.73■□□□□ 0.27
CCDC57-211ENST00000578187 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
CCDC57-211ENST00000578187 BCORQ6W2J9 1755 aa16.73■□□□□ 0.27
CCDC57-211ENST00000578187 ZC3H4Q9UPT8 1303 aaKnown RBP16.72■□□□□ 0.27
CCDC57-211ENST00000578187 ZNF622Q969S3 477 aaKnown RBP eCLIP16.72■□□□□ 0.272e-8■□□□□ 10
CCDC57-211ENST00000578187 BABAM1Q9NWV8 329 aa16.72■□□□□ 0.27
CCDC57-211ENST00000578187 MIS18AQ9NYP9 233 aa16.72■□□□□ 0.27
CCDC57-211ENST00000578187 USP16Q9Y5T5 823 aa16.72■□□□□ 0.27
CCDC57-211ENST00000578187 CAMTA2O94983 1202 aa16.71■□□□□ 0.27
CCDC57-211ENST00000578187 LMNB1P20700 586 aa16.71■□□□□ 0.27
CCDC57-211ENST00000578187 CLEC4GQ6UXB4 293 aa16.71■□□□□ 0.27
CCDC57-211ENST00000578187 TNRC6CQ9HCJ0 1690 aaKnown RBP16.7■□□□□ 0.26
CCDC57-211ENST00000578187 PRR5LQ6MZQ0 368 aa16.7■□□□□ 0.26
CCDC57-211ENST00000578187 NMRK2Q9NPI5 230 aa16.7■□□□□ 0.26
CCDC57-211ENST00000578187 PRAMEF22A3QJZ6 481 aa16.69■□□□□ 0.26
CCDC57-211ENST00000578187 EIF4A1P60842 406 aaKnown RBP16.69■□□□□ 0.26
CCDC57-211ENST00000578187 NBPF5PQ86XG9 351 aaPredicted RBP16.69■□□□□ 0.26
CCDC57-211ENST00000578187 TSPYL4Q9UJ04 414 aa16.69■□□□□ 0.26
CCDC57-211ENST00000578187 SBF1O95248 1867 aa16.69■□□□□ 0.26
CCDC57-211ENST00000578187 ANKRD31Q8N7Z5 1873 aa16.68■□□□□ 0.26
CCDC57-211ENST00000578187 RGL2O15211 777 aa16.68■□□□□ 0.26
CCDC57-211ENST00000578187 PIP4K2AP48426 406 aaPredicted RBP16.68■□□□□ 0.26
CCDC57-211ENST00000578187 APLP1P51693 650 aa16.68■□□□□ 0.26
CCDC57-211ENST00000578187 RASSF7Q02833 373 aa16.68■□□□□ 0.26
CCDC57-211ENST00000578187 CNKSR1Q969H4 720 aa16.68■□□□□ 0.26
CCDC57-211ENST00000578187 SOGA3Q5TF21 947 aa16.67■□□□□ 0.26
CCDC57-211ENST00000578187 RBM46Q8TBY0 533 aaKnown RBP16.67■□□□□ 0.26
CCDC57-211ENST00000578187 CHL1O00533 1208 aa16.66■□□□□ 0.26
CCDC57-211ENST00000578187 CCDC27Q2M243 656 aa16.66■□□□□ 0.26
CCDC57-211ENST00000578187 STYK1Q6J9G0 422 aa16.66■□□□□ 0.26
CCDC57-211ENST00000578187 TPTE2Q6XPS3 522 aa16.66■□□□□ 0.26
CCDC57-211ENST00000578187 COL11A2P13942 1736 aaPredicted RBP16.65■□□□□ 0.26
CCDC57-211ENST00000578187 TIAM2Q8IVF5 1701 aa16.65■□□□□ 0.26
CCDC57-211ENST00000578187 CCER2I3L3R5 266 aa16.65■□□□□ 0.26
CCDC57-211ENST00000578187 C21orf2O43822 256 aa16.65■□□□□ 0.26
CCDC57-211ENST00000578187 CCDC24Q8N4L8 307 aa16.65■□□□□ 0.26
CCDC57-211ENST00000578187 MASTLQ96GX5 879 aa16.65■□□□□ 0.26
CCDC57-211ENST00000578187 NIP7Q9Y221 180 aaKnown RBP eCLIP16.65■□□□□ 0.26
CCDC57-211ENST00000578187 ZNF853P0CG23 659 aa16.64■□□□□ 0.25
CCDC57-211ENST00000578187 GTF2E1P29083 439 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-211ENST00000578187 CALD1Q05682 793 aaKnown RBP16.64■□□□□ 0.25
CCDC57-211ENST00000578187 FSTL1Q12841 308 aa16.64■□□□□ 0.25
CCDC57-211ENST00000578187 DIEXFQ68CQ4 756 aaKnown RBP16.64■□□□□ 0.25
CCDC57-211ENST00000578187 DPY19L2Q6NUT2 758 aa16.64■□□□□ 0.25
CCDC57-211ENST00000578187 KIF6Q6ZMV9 814 aa16.64■□□□□ 0.25
CCDC57-211ENST00000578187 FAM9BQ8IZU0 186 aa16.64■□□□□ 0.25
CCDC57-211ENST00000578187 CFAP44Q96MT7 982 aa16.64■□□□□ 0.25
CCDC57-211ENST00000578187 RRAGCQ9HB90 399 aa16.64■□□□□ 0.25
CCDC57-211ENST00000578187 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
CCDC57-211ENST00000578187 NBPF26B4DH59 902 aa16.63■□□□□ 0.25
CCDC57-211ENST00000578187 SRGNP10124 158 aa16.63■□□□□ 0.25
CCDC57-211ENST00000578187 NBPF10Q6P3W6 841 aaKnown RBP16.63■□□□□ 0.25
CCDC57-211ENST00000578187 NBPF15Q8N660 670 aa16.63■□□□□ 0.25
CCDC57-211ENST00000578187 IFT57Q9NWB7 429 aa16.63■□□□□ 0.25
CCDC57-211ENST00000578187 CEP350Q5VT06 3117 aa16.63■□□□□ 0.25
CCDC57-211ENST00000578187 ARFGEF2Q9Y6D5 1785 aa16.62■□□□□ 0.25
CCDC57-211ENST00000578187 GLTPD2A6NH11 291 aa16.62■□□□□ 0.25
CCDC57-211ENST00000578187 NFKBIEO00221 500 aa16.62■□□□□ 0.25
CCDC57-211ENST00000578187 PRPF40BQ6NWY9 871 aaKnown RBP16.62■□□□□ 0.25
CCDC57-211ENST00000578187 NYXQ9GZU5 481 aa16.62■□□□□ 0.25
CCDC57-211ENST00000578187 TAOK3Q9H2K8 898 aa16.62■□□□□ 0.25
CCDC57-211ENST00000578187 CACNA1SQ13698 1873 aa16.62■□□□□ 0.25
CCDC57-211ENST00000578187 VEGFAP15692 232 aaPredicted RBP16.61■□□□□ 0.25
CCDC57-211ENST00000578187 NPR1P16066 1061 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 GNAI1P63096 354 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 ERFEQ4G0M1 354 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 WWC1Q8IX03 1113 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 NGEFQ8N5V2 710 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 SMC1BQ8NDV3 1235 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 MBIPQ9NS73 344 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 LAS1LQ9Y4W2 734 aaKnown RBP16.61■□□□□ 0.25
CCDC57-211ENST00000578187 ERBB4Q15303 1308 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 LTBP3Q9NS15 1303 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 CCDC88AQ3V6T2 1871 aa16.61■□□□□ 0.25
CCDC57-211ENST00000578187 ERVV-1B6SEH8 477 aa16.6■□□□□ 0.25
CCDC57-211ENST00000578187 NUP98P52948 1817 aa16.6■□□□□ 0.25
CCDC57-211ENST00000578187 FER1L6Q2WGJ9 1857 aa16.6■□□□□ 0.25
CCDC57-211ENST00000578187 FAM177BA6PVY3 158 aa16.59■□□□□ 0.25
CCDC57-211ENST00000578187 MYL6BP14649 208 aa16.59■□□□□ 0.25
CCDC57-211ENST00000578187 IL16Q14005 1332 aa16.59■□□□□ 0.25
CCDC57-211ENST00000578187 HOXB7P09629 217 aa16.58■□□□□ 0.24
CCDC57-211ENST00000578187 ALDH1B1P30837 517 aa16.58■□□□□ 0.24
CCDC57-211ENST00000578187 HLFQ16534 295 aa16.58■□□□□ 0.24
CCDC57-211ENST00000578187 KRT24Q2M2I5 525 aa16.58■□□□□ 0.24
CCDC57-211ENST00000578187 CCDC93Q567U6 631 aa16.58■□□□□ 0.24
CCDC57-211ENST00000578187 MAP3K15Q6ZN16 1313 aa16.58■□□□□ 0.24
CCDC57-211ENST00000578187 WDR90Q96KV7 1748 aa16.58■□□□□ 0.24
CCDC57-211ENST00000578187 DICER1Q9UPY3 1922 aaKnown RBP16.57■□□□□ 0.24
CCDC57-211ENST00000578187 SLX4Q8IY92 1834 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms