RNA–Protein interactions for RNA: ENST00000578067.5

LIMD2-203, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 2,019 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-203ENST00000578067 PIGBQ92521 554 aa34.08■■■■□ 3.05
LIMD2-203ENST00000578067 BICC1Q9H694 974 aaKnown RBP34.07■■■■□ 3.04
LIMD2-203ENST00000578067 AOX1Q06278 1338 aa34.07■■■■□ 3.04
LIMD2-203ENST00000578067 A1BGP04217 495 aa34.06■■■■□ 3.04
LIMD2-203ENST00000578067 ARFGEF2Q9Y6D5 1785 aa34.06■■■■□ 3.04
LIMD2-203ENST00000578067 TSHZ3Q63HK5 1081 aa34.05■■■■□ 3.04
LIMD2-203ENST00000578067 CDCA7Q9BWT1 371 aaPredicted RBP34.04■■■■□ 3.04
LIMD2-203ENST00000578067 TBC1D2Q9BYX2 928 aa34.04■■■■□ 3.04
LIMD2-203ENST00000578067 OS9Q13438 667 aaPredicted RBP34.04■■■■□ 3.04
LIMD2-203ENST00000578067 ASAP1Q9ULH1 1129 aa34.04■■■■□ 3.04
LIMD2-203ENST00000578067 VSIG10Q8N0Z9 540 aa34.03■■■■□ 3.04
LIMD2-203ENST00000578067 WNK3Q9BYP7 1800 aa34.03■■■■□ 3.04
LIMD2-203ENST00000578067 LRP6O75581 1613 aa34.03■■■■□ 3.04
LIMD2-203ENST00000578067 TEX13AQ9BXU3 409 aaPredicted RBP34.03■■■■□ 3.04
LIMD2-203ENST00000578067 ATG3Q9NT62 314 aa34.03■■■■□ 3.04
LIMD2-203ENST00000578067 THRAP3Q9Y2W1 955 aaKnown RBP34.03■■■■□ 3.04
LIMD2-203ENST00000578067 SPATA31A1Q5TZJ5 1347 aa34.02■■■■□ 3.04
LIMD2-203ENST00000578067 NRAPQ86VF7 1730 aa34.02■■■■□ 3.04
LIMD2-203ENST00000578067 NUTM1Q86Y26 1132 aa34.02■■■■□ 3.04
LIMD2-203ENST00000578067 NUTM2BA6NNL0 878 aaPredicted RBP34.01■■■■□ 3.03
LIMD2-203ENST00000578067 NUTM2EB1AL46 878 aaPredicted RBP34.01■■■■□ 3.03
LIMD2-203ENST00000578067 TTLL7Q6ZT98 887 aa34.01■■■■□ 3.03
LIMD2-203ENST00000578067 ERC1Q8IUD2 1116 aa34.01■■■■□ 3.03
LIMD2-203ENST00000578067 NUTM2AQ8IVF1 878 aaPredicted RBP34.01■■■■□ 3.03
LIMD2-203ENST00000578067 ITGB4P16144 1822 aa34■■■■□ 3.03
LIMD2-203ENST00000578067 ATP5J2-PTCD1G3V325 749 aa33.99■■■■□ 3.03
LIMD2-203ENST00000578067 PA2G4Q9UQ80 394 aaKnown RBP33.99■■■■□ 3.03
LIMD2-203ENST00000578067 BCL9O00512 1426 aa33.99■■■■□ 3.03
LIMD2-203ENST00000578067 AFDNP55196 1824 aaKnown RBP33.98■■■■□ 3.03
LIMD2-203ENST00000578067 TUBGCP6Q96RT7 1819 aa33.98■■■■□ 3.03
LIMD2-203ENST00000578067 COL15A1P39059 1388 aa33.98■■■■□ 3.03
LIMD2-203ENST00000578067 NBR1Q14596 966 aa33.97■■■■□ 3.03
LIMD2-203ENST00000578067 A0A087WZG4 1122 aa33.96■■■■□ 3.03
LIMD2-203ENST00000578067 EPHA10Q5JZY3 1008 aa33.96■■■■□ 3.03
LIMD2-203ENST00000578067 KIF2CQ99661 725 aa33.96■■■■□ 3.03
LIMD2-203ENST00000578067 TRIM6-TRIM34B2RNG4 842 aa33.95■■■■□ 3.03
LIMD2-203ENST00000578067 UBE3BQ7Z3V4 1068 aa33.95■■■■□ 3.03
LIMD2-203ENST00000578067 DNAJC10Q8IXB1 793 aa33.95■■■■□ 3.03
LIMD2-203ENST00000578067 CLASRPQ8N2M8 674 aaKnown RBP33.95■■■■□ 3.03
LIMD2-203ENST00000578067 NUP188Q5SRE5 1749 aa33.94■■■■□ 3.02
LIMD2-203ENST00000578067 RBM42Q9BTD8 480 aaKnown RBP33.94■■■■□ 3.02
LIMD2-203ENST00000578067 USP26Q9BXU7 913 aa33.94■■■■□ 3.02
LIMD2-203ENST00000578067 G3BP1Q13283 466 aaKnown RBP eCLIP33.94■■■■□ 3.02
LIMD2-203ENST00000578067 RILPL2Q969X0 211 aa33.93■■■■□ 3.02
LIMD2-203ENST00000578067 USP42Q9H9J4 1324 aaKnown RBP33.93■■■■□ 3.02
LIMD2-203ENST00000578067 UBAP1LF5GYI3 381 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 ERC2O15083 957 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 REC8O95072 547 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 STARD3NLO95772 234 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 PI4K2BQ8TCG2 481 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 JARID2Q92833 1246 aaPredicted RBP33.92■■■■□ 3.02
LIMD2-203ENST00000578067 CASP7P55210 303 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 DDB1Q16531 1140 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 SPATA31A5Q5VU36 1347 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 SPATA31A7Q8IWB4 1347 aa33.92■■■■□ 3.02
LIMD2-203ENST00000578067 ZBTB3Q9H5J0 574 aa33.91■■■■□ 3.02
LIMD2-203ENST00000578067 NWD2Q9ULI1 1742 aa33.91■■■■□ 3.02
LIMD2-203ENST00000578067 SLIT2O94813 1529 aa33.91■■■■□ 3.02
LIMD2-203ENST00000578067 RABL6Q3YEC7 729 aaPredicted RBP33.91■■■■□ 3.02
LIMD2-203ENST00000578067 SNX21Q969T3 373 aa33.91■■■■□ 3.02
LIMD2-203ENST00000578067 CWC25Q9NXE8 425 aaPredicted RBP33.91■■■■□ 3.02
LIMD2-203ENST00000578067 TTC41PQ6P2S7 1318 aa33.9■■■■□ 3.02
LIMD2-203ENST00000578067 H7C1W4 665 aa33.9■■■■□ 3.02
LIMD2-203ENST00000578067 HSCBQ8IWL3 235 aa33.9■■■■□ 3.02
LIMD2-203ENST00000578067 SYTL4Q96C24 671 aaPredicted RBP33.9■■■■□ 3.02
LIMD2-203ENST00000578067 SASH1O94885 1247 aa33.88■■■■□ 3.01
LIMD2-203ENST00000578067 PRIM1P49642 420 aaKnown RBP33.88■■■■□ 3.01
LIMD2-203ENST00000578067 UNC5CLQ8IV45 518 aa33.88■■■■□ 3.01
LIMD2-203ENST00000578067 CCDC191Q8NCU4 936 aa33.88■■■■□ 3.01
LIMD2-203ENST00000578067 CHMLP26374 656 aa33.87■■■■□ 3.01
LIMD2-203ENST00000578067 IFIT2P09913 472 aaKnown RBP33.86■■■■□ 3.01
LIMD2-203ENST00000578067 BARGINQ6ZT62 677 aa33.86■■■■□ 3.01
LIMD2-203ENST00000578067 COPRSQ9NQ92 184 aa33.86■■■■□ 3.01
LIMD2-203ENST00000578067 ESYT1Q9BSJ8 1104 aa33.86■■■■□ 3.01
LIMD2-203ENST00000578067 SIL1Q9H173 461 aa33.85■■■■□ 3.01
LIMD2-203ENST00000578067 CCDC9Q9Y3X0 531 aaKnown RBP33.85■■■■□ 3.01
LIMD2-203ENST00000578067 GLRX3O76003 335 aaKnown RBP33.84■■■■□ 3.01
LIMD2-203ENST00000578067 RFX5P48382 616 aaPredicted RBP33.84■■■■□ 3.01
LIMD2-203ENST00000578067 GPATCH3Q96I76 525 aa33.84■■■■□ 3.01
LIMD2-203ENST00000578067 SLC4A9Q96Q91 983 aa33.84■■■■□ 3.01
LIMD2-203ENST00000578067 DOT1LQ8TEK3 1739 aa33.84■■■■□ 3.01
LIMD2-203ENST00000578067 KLHDC4Q8TBB5 520 aa33.84■■■■□ 3.01
LIMD2-203ENST00000578067 ECHDC1Q9NTX5 307 aa33.84■■■■□ 3.01
LIMD2-203ENST00000578067 ZNF330Q9Y3S2 320 aaPredicted RBP33.84■■■■□ 3.01
LIMD2-203ENST00000578067 KIF6Q6ZMV9 814 aa33.83■■■■□ 3.01
LIMD2-203ENST00000578067 AACSQ86V21 672 aa33.83■■■■□ 3.01
LIMD2-203ENST00000578067 CYP19A1P11511 503 aaPredicted RBP33.82■■■■□ 3
LIMD2-203ENST00000578067 ISCA1Q9BUE6 129 aa33.82■■■■□ 3
LIMD2-203ENST00000578067 SLKQ9H2G2 1235 aaPredicted RBP33.82■■■■□ 3
LIMD2-203ENST00000578067 PTPN12Q05209 780 aaKnown RBP33.81■■■■□ 3
LIMD2-203ENST00000578067 TCIRG1Q13488 830 aa33.81■■■■□ 3
LIMD2-203ENST00000578067 CNTROBQ8N137 903 aa33.81■■■■□ 3
LIMD2-203ENST00000578067 ANTXR1Q9H6X2 564 aa33.81■■■■□ 3
LIMD2-203ENST00000578067 FOXO4P98177 505 aa33.8■■■■□ 3
LIMD2-203ENST00000578067 MARCH10Q8NA82 808 aaPredicted RBP33.8■■■■□ 3
LIMD2-203ENST00000578067 TJP1Q07157 1748 aa33.8■■■■□ 3
LIMD2-203ENST00000578067 MAP4K4O95819 1239 aaPredicted RBP33.8■■■■□ 3
LIMD2-203ENST00000578067 RTL5Q5HYW3 569 aaPredicted RBP33.79■■■■□ 3
LIMD2-203ENST00000578067 LMBR1LQ6UX01 489 aa33.79■■■■□ 3
LIMD2-203ENST00000578067 EAF2Q96CJ1 260 aaPredicted RBP33.79■■■■□ 3
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms