RNA–Protein interactions for RNA: ENST00000578029.1

KRT39-202, Transcript of keratin 39, humanhuman

TSL 3

Gene KRT39, Length 777 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT39-202ENST00000578029 ZDHHC1Q8WTX9 485 aa7.23□□□□□ -1.25
KRT39-202ENST00000578029 FRMD6Q96NE9 622 aa7.23□□□□□ -1.25
KRT39-202ENST00000578029 NLRP3Q96P20 1036 aa7.23□□□□□ -1.25
KRT39-202ENST00000578029 FAM13BQ9NYF5 915 aa7.23□□□□□ -1.25
KRT39-202ENST00000578029 GTF2E1P29083 439 aaPredicted RBP7.22□□□□□ -1.25
KRT39-202ENST00000578029 GNA15P30679 374 aa7.22□□□□□ -1.25
KRT39-202ENST00000578029 ZNF76P36508 570 aa7.22□□□□□ -1.25
KRT39-202ENST00000578029 FANCCQ00597 558 aa7.22□□□□□ -1.25
KRT39-202ENST00000578029 RAD51AP2Q09MP3 1159 aa7.22□□□□□ -1.25
KRT39-202ENST00000578029 CSRNP1Q96S65 589 aa7.22□□□□□ -1.25
KRT39-202ENST00000578029 PHACTR1Q9C0D0 580 aa7.22□□□□□ -1.25
KRT39-202ENST00000578029 FHDC1Q9C0D6 1143 aaPredicted RBP7.22□□□□□ -1.25
KRT39-202ENST00000578029 TGIF2Q9GZN2 237 aa7.22□□□□□ -1.25
KRT39-202ENST00000578029 RNF19AQ9NV58 838 aa7.22□□□□□ -1.25
KRT39-202ENST00000578029 RPLP1P05386 114 aaKnown RBP7.21□□□□□ -1.26
KRT39-202ENST00000578029 CANXP27824 592 aaKnown RBP7.21□□□□□ -1.26
KRT39-202ENST00000578029 SH3PXD2AQ5TCZ1 1133 aa7.21□□□□□ -1.26
KRT39-202ENST00000578029 C1orf53Q5VUE5 145 aa7.21□□□□□ -1.26
KRT39-202ENST00000578029 LIAT1Q6ZQX7 453 aa7.21□□□□□ -1.26
KRT39-202ENST00000578029 PPARGC1BQ86YN6 1023 aaKnown RBP7.21□□□□□ -1.26
KRT39-202ENST00000578029 ZSCAN10Q96SZ4 725 aaPredicted RBP7.21□□□□□ -1.26
KRT39-202ENST00000578029 NIFKQ9BYG3 293 aaKnown RBP7.21□□□□□ -1.26
KRT39-202ENST00000578029 CCSER2Q9H7U1 834 aa7.21□□□□□ -1.26
KRT39-202ENST00000578029 KLK14Q9P0G3 267 aa7.21□□□□□ -1.26
KRT39-202ENST00000578029 PTGIRP43119 386 aa7.2□□□□□ -1.26
KRT39-202ENST00000578029 SLC43A3Q8NBI5 491 aa7.2□□□□□ -1.26
KRT39-202ENST00000578029 MRGPRX2Q96LB1 330 aa7.2□□□□□ -1.26
KRT39-202ENST00000578029 SETDB2Q96T68 719 aa7.2□□□□□ -1.26
KRT39-202ENST00000578029 AK5Q9Y6K8 562 aa7.2□□□□□ -1.26
KRT39-202ENST00000578029 MEN1O00255 615 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 NNTQ13423 1086 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 GNL2Q13823 731 aaKnown RBP7.19□□□□□ -1.26
KRT39-202ENST00000578029 HIF1AQ16665 826 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 TMEM214Q6NUQ4 689 aaKnown RBP7.19□□□□□ -1.26
KRT39-202ENST00000578029 Q6ZVU0 165 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 TREML1Q86YW5 311 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 ZNF295-AS1Q8N0V1 137 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 KDF1Q8NAX2 398 aaPredicted RBP7.19□□□□□ -1.26
KRT39-202ENST00000578029 DNAJC25Q9H1X3 360 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 SPG7Q9UQ90 795 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 PARP3Q9Y6F1 533 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 WASF2Q9Y6W5 498 aa7.19□□□□□ -1.26
KRT39-202ENST00000578029 EIF1AYO14602 144 aaKnown RBP7.18□□□□□ -1.26
KRT39-202ENST00000578029 CBLBQ13191 982 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 C8orf34Q49A92 452 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 GPR152Q8TDT2 470 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 RHBDD1Q8TEB9 315 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 NUDT16Q96DE0 195 aaKnown RBP7.18□□□□□ -1.26
KRT39-202ENST00000578029 CRELD1Q96HD1 420 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 TINF2Q9BSI4 451 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 TANGO6Q9C0B7 1094 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 CAPN10Q9HC96 672 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 NLRP2Q9NX02 1062 aa7.18□□□□□ -1.26
KRT39-202ENST00000578029 ALDH1A1P00352 501 aa7.17□□□□□ -1.26
KRT39-202ENST00000578029 ORC1Q13415 861 aa7.17□□□□□ -1.26
KRT39-202ENST00000578029 CFHR5Q9BXR6 569 aa7.17□□□□□ -1.26
KRT39-202ENST00000578029 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.17□□□□□ -1.26
KRT39-202ENST00000578029 CPNE3O75131 537 aaKnown RBP7.16□□□□□ -1.26
KRT39-202ENST00000578029 EIF4BP23588 611 aaKnown RBP7.16□□□□□ -1.26
KRT39-202ENST00000578029 SLC19A1P41440 591 aa7.16□□□□□ -1.26
KRT39-202ENST00000578029 GNASQ5JWF2 1037 aa7.16□□□□□ -1.26
KRT39-202ENST00000578029 SPATA32Q96LK8 384 aa7.16□□□□□ -1.26
KRT39-202ENST00000578029 GGNBP2Q9H3C7 697 aa7.16□□□□□ -1.26
KRT39-202ENST00000578029 PRKAG2Q9UGJ0 569 aa7.16□□□□□ -1.26
KRT39-202ENST00000578029 A0A0G2JS52 829 aa7.15□□□□□ -1.26
KRT39-202ENST00000578029 GIPC1O14908 333 aa7.15□□□□□ -1.26
KRT39-202ENST00000578029 MICAL2O94851 1124 aa7.15□□□□□ -1.26
KRT39-202ENST00000578029 ATP2B1P20020 1258 aa7.15□□□□□ -1.26
KRT39-202ENST00000578029 RELBQ01201 579 aa7.15□□□□□ -1.26
KRT39-202ENST00000578029 RHPN1Q8TCX5 695 aa7.15□□□□□ -1.26
KRT39-202ENST00000578029 TGFBR3LH3BV60 316 aa7.14□□□□□ -1.27
KRT39-202ENST00000578029 SMARCA5O60264 1052 aaPredicted RBP7.14□□□□□ -1.27
KRT39-202ENST00000578029 ZIC2O95409 532 aaPredicted RBP7.14□□□□□ -1.27
KRT39-202ENST00000578029 CTSHP09668 335 aa7.14□□□□□ -1.27
KRT39-202ENST00000578029 GPC1P35052 558 aa7.14□□□□□ -1.27
KRT39-202ENST00000578029 TXLNAP40222 546 aa7.14□□□□□ -1.27
KRT39-202ENST00000578029 NBPF1Q3BBV0 1214 aa7.14□□□□□ -1.27
KRT39-202ENST00000578029 EMID1Q96A84 441 aaPredicted RBP7.14□□□□□ -1.27
KRT39-202ENST00000578029 ITPKCQ96DU7 683 aa7.14□□□□□ -1.27
KRT39-202ENST00000578029 AGBL1Q96MI9 1066 aa7.14□□□□□ -1.27
KRT39-202ENST00000578029 ACBD3Q9H3P7 528 aa7.14□□□□□ -1.27
KRT39-202ENST00000578029 SLC27A3Q5K4L6 730 aa7.13□□□□□ -1.27
KRT39-202ENST00000578029 ZNF654Q8IZM8 581 aa7.13□□□□□ -1.27
KRT39-202ENST00000578029 ARMC5Q96C12 935 aa7.13□□□□□ -1.27
KRT39-202ENST00000578029 ZNF395Q9H8N7 513 aaPredicted RBP7.13□□□□□ -1.27
KRT39-202ENST00000578029 ZDHHC3Q9NYG2 299 aa7.13□□□□□ -1.27
KRT39-202ENST00000578029 BCS1LQ9Y276 419 aa7.13□□□□□ -1.27
KRT39-202ENST00000578029 FNDC3AQ9Y2H6 1198 aaKnown RBP7.13□□□□□ -1.27
KRT39-202ENST00000578029 GPC6Q9Y625 555 aaPredicted RBP7.13□□□□□ -1.27
KRT39-202ENST00000578029 PLA2G4AP47712 749 aa7.12□□□□□ -1.27
KRT39-202ENST00000578029 WDR4P57081 412 aaKnown RBP7.12□□□□□ -1.27
KRT39-202ENST00000578029 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.12□□□□□ -1.27
KRT39-202ENST00000578029 IER5Q5VY09 327 aa7.12□□□□□ -1.27
KRT39-202ENST00000578029 SPRYD7Q5W111 196 aa7.12□□□□□ -1.27
KRT39-202ENST00000578029 XKR5Q6UX68 686 aa7.12□□□□□ -1.27
KRT39-202ENST00000578029 DPH6Q7L8W6 267 aa7.12□□□□□ -1.27
KRT39-202ENST00000578029 HS2ST1Q7LGA3 356 aa7.12□□□□□ -1.27
KRT39-202ENST00000578029 SNIP1Q8TAD8 396 aaKnown RBP7.12□□□□□ -1.27
KRT39-202ENST00000578029 AIDAQ96BJ3 306 aa7.12□□□□□ -1.27
KRT39-202ENST00000578029 GMLQ99445 158 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms