RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 CANXP27824 592 aaKnown RBP18.43■□□□□ 0.54
SREBF1-217ENST00000577897 PPP2R1AP30153 589 aa18.43■□□□□ 0.54
SREBF1-217ENST00000577897 PDE6BP35913 854 aa18.43■□□□□ 0.54
SREBF1-217ENST00000577897 SLC39A6Q13433 755 aa18.43■□□□□ 0.54
SREBF1-217ENST00000577897 WDR43Q15061 677 aaKnown RBP eCLIP18.43■□□□□ 0.544e-6■■□□□ 14
SREBF1-217ENST00000577897 DEFB115Q30KQ5 88 aa18.43■□□□□ 0.54
SREBF1-217ENST00000577897 CACNA1SQ13698 1873 aa18.43■□□□□ 0.54
SREBF1-217ENST00000577897 LTBP3Q9NS15 1303 aa18.43■□□□□ 0.54
SREBF1-217ENST00000577897 ITGBL1O95965 494 aaPredicted RBP18.42■□□□□ 0.54
SREBF1-217ENST00000577897 CFAP44Q96MT7 982 aa18.42■□□□□ 0.54
SREBF1-217ENST00000577897 WDR33Q9C0J8 1336 aaKnown RBP18.42■□□□□ 0.54
SREBF1-217ENST00000577897 SCN4AP35499 1836 aa18.42■□□□□ 0.54
SREBF1-217ENST00000577897 RASSF10A6NK89 507 aa18.41■□□□□ 0.54
SREBF1-217ENST00000577897 MORC1Q86VD1 984 aa18.41■□□□□ 0.54
SREBF1-217ENST00000577897 ABT1Q9ULW3 272 aaKnown RBP18.41■□□□□ 0.54
SREBF1-217ENST00000577897 NPHP1O15259 732 aa18.4■□□□□ 0.54
SREBF1-217ENST00000577897 TBC1D9BQ66K14 1250 aa18.4■□□□□ 0.54
SREBF1-217ENST00000577897 L3MBTL3Q96JM7 780 aaPredicted RBP18.4■□□□□ 0.54
SREBF1-217ENST00000577897 BRIP1Q9BX63 1249 aa18.4■□□□□ 0.54
SREBF1-217ENST00000577897 SLC52A2Q9HAB3 445 aa18.4■□□□□ 0.54
SREBF1-217ENST00000577897 PDZRN3Q9UPQ7 1066 aa18.4■□□□□ 0.54
SREBF1-217ENST00000577897 GRM1Q13255 1194 aa18.39■□□□□ 0.53
SREBF1-217ENST00000577897 PRR5LQ6MZQ0 368 aa18.39■□□□□ 0.53
SREBF1-217ENST00000577897 PAXIP1Q6ZW49 1069 aaPredicted RBP18.39■□□□□ 0.53
SREBF1-217ENST00000577897 SLX4Q8IY92 1834 aa18.38■□□□□ 0.53
SREBF1-217ENST00000577897 MAP1SQ66K74 1059 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-217ENST00000577897 SULT6B1Q6IMI4 303 aa18.38■□□□□ 0.53
SREBF1-217ENST00000577897 PRPF40BQ6NWY9 871 aaKnown RBP18.38■□□□□ 0.53
SREBF1-217ENST00000577897 CNKSR1Q969H4 720 aa18.38■□□□□ 0.53
SREBF1-217ENST00000577897 BEGAINQ9BUH8 593 aa18.38■□□□□ 0.53
SREBF1-217ENST00000577897 HACL1Q9UJ83 578 aa18.38■□□□□ 0.53
SREBF1-217ENST00000577897 ZNF330Q9Y3S2 320 aaPredicted RBP18.38■□□□□ 0.53
SREBF1-217ENST00000577897 EPHX2P34913 555 aa18.37■□□□□ 0.53
SREBF1-217ENST00000577897 CNTROBQ8N137 903 aa18.37■□□□□ 0.53
SREBF1-217ENST00000577897 CFAP53Q96M91 514 aa18.37■□□□□ 0.53
SREBF1-217ENST00000577897 LGR6Q9HBX8 967 aa18.37■□□□□ 0.53
SREBF1-217ENST00000577897 ZNF541Q9H0D2 1346 aa18.37■□□□□ 0.53
SREBF1-217ENST00000577897 AKAP4Q5JQC9 854 aa18.36■□□□□ 0.53
SREBF1-217ENST00000577897 SOGA3Q5TF21 947 aa18.36■□□□□ 0.53
SREBF1-217ENST00000577897 ADAMTSL1Q8N6G6 1762 aa18.36■□□□□ 0.53
SREBF1-217ENST00000577897 SCN7AQ01118 1682 aa18.35■□□□□ 0.53
SREBF1-217ENST00000577897 RNF123Q5XPI4 1314 aa18.35■□□□□ 0.53
SREBF1-217ENST00000577897 TSKSQ9UJT2 592 aa18.35■□□□□ 0.53
SREBF1-217ENST00000577897 MRC1P22897 1456 aa18.34■□□□□ 0.53
SREBF1-217ENST00000577897 A0A087WZG4 1122 aa18.34■□□□□ 0.53
SREBF1-217ENST00000577897 STYK1Q6J9G0 422 aa18.34■□□□□ 0.53
SREBF1-217ENST00000577897 NGEFQ8N5V2 710 aa18.34■□□□□ 0.53
SREBF1-217ENST00000577897 CNBD1Q8NA66 436 aa18.34■□□□□ 0.53
SREBF1-217ENST00000577897 ARFGEF2Q9Y6D5 1785 aa18.34■□□□□ 0.53
SREBF1-217ENST00000577897 RNMTO43148 476 aaKnown RBP18.33■□□□□ 0.52
SREBF1-217ENST00000577897 EIF5P55010 431 aaKnown RBP18.33■□□□□ 0.52
SREBF1-217ENST00000577897 ST5P78524 1137 aa18.33■□□□□ 0.52
SREBF1-217ENST00000577897 CCDC93Q567U6 631 aa18.33■□□□□ 0.52
SREBF1-217ENST00000577897 PNMA8AQ86V59 439 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-217ENST00000577897 MASTLQ96GX5 879 aa18.33■□□□□ 0.52
SREBF1-217ENST00000577897 CAPNS2Q96L46 248 aa18.33■□□□□ 0.52
SREBF1-217ENST00000577897 ZNF277Q9NRM2 450 aaPredicted RBP18.33■□□□□ 0.52
SREBF1-217ENST00000577897 TBC1D2BQ9UPU7 963 aa18.33■□□□□ 0.52
SREBF1-217ENST00000577897 THSD7BQ9C0I4 1608 aa18.32■□□□□ 0.52
SREBF1-217ENST00000577897 SRGNP10124 158 aa18.32■□□□□ 0.52
SREBF1-217ENST00000577897 VSIG10Q8N0Z9 540 aa18.32■□□□□ 0.52
SREBF1-217ENST00000577897 STARD3NLO95772 234 aa18.31■□□□□ 0.52
SREBF1-217ENST00000577897 CYP4F22Q6NT55 531 aa18.31■□□□□ 0.52
SREBF1-217ENST00000577897 ECE1P42892 770 aa18.3■□□□□ 0.52
SREBF1-217ENST00000577897 FKBP4Q02790 459 aaKnown RBP eCLIP18.3■□□□□ 0.52
SREBF1-217ENST00000577897 TTC5Q8N0Z6 440 aa18.3■□□□□ 0.52
SREBF1-217ENST00000577897 GPR101Q96P66 508 aaPredicted RBP18.3■□□□□ 0.52
SREBF1-217ENST00000577897 SETDB2Q96T68 719 aa18.3■□□□□ 0.52
SREBF1-217ENST00000577897 DDX21Q9NR30 783 aaKnown RBP eCLIP18.3■□□□□ 0.52
SREBF1-217ENST00000577897 FMR1Q06787 632 aaKnown RBP eCLIP18.29■□□□□ 0.52
SREBF1-217ENST00000577897 MCOLN1Q9GZU1 580 aa18.29■□□□□ 0.52
SREBF1-217ENST00000577897 CASP8AP2Q9UKL3 1982 aa18.29■□□□□ 0.52
SREBF1-217ENST00000577897 UBR2Q8IWV8 1755 aa18.29■□□□□ 0.52
SREBF1-217ENST00000577897 ERICH6BQ5W0A0 696 aa18.28■□□□□ 0.52
SREBF1-217ENST00000577897 OLFM4Q6UX06 510 aa18.28■□□□□ 0.52
SREBF1-217ENST00000577897 NPM2Q86SE8 214 aaKnown RBP18.28■□□□□ 0.52
SREBF1-217ENST00000577897 NUDCQ9Y266 331 aa18.28■□□□□ 0.52
SREBF1-217ENST00000577897 AOC2O75106 756 aa18.26■□□□□ 0.51
SREBF1-217ENST00000577897 C7orf43Q8WVR3 580 aa18.26■□□□□ 0.51
SREBF1-217ENST00000577897 LTBP1Q14766 1721 aa18.26■□□□□ 0.51
SREBF1-217ENST00000577897 IL13P35225 146 aa18.25■□□□□ 0.51
SREBF1-217ENST00000577897 IARSP41252 1262 aaKnown RBP18.25■□□□□ 0.51
SREBF1-217ENST00000577897 GJA3Q9Y6H8 435 aa18.25■□□□□ 0.51
SREBF1-217ENST00000577897 FZD9O00144 591 aa18.24■□□□□ 0.51
SREBF1-217ENST00000577897 CAMTA2O94983 1202 aa18.24■□□□□ 0.51
SREBF1-217ENST00000577897 HMOX1P09601 288 aa18.24■□□□□ 0.51
SREBF1-217ENST00000577897 LMOD1P29536 600 aaPredicted RBP18.24■□□□□ 0.51
SREBF1-217ENST00000577897 GPC2Q8N158 579 aa18.24■□□□□ 0.51
SREBF1-217ENST00000577897 ADAMTS8Q9UP79 889 aa18.24■□□□□ 0.51
SREBF1-217ENST00000577897 NPR1P16066 1061 aa18.23■□□□□ 0.51
SREBF1-217ENST00000577897 IL6STP40189 918 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-217ENST00000577897 DGKZQ13574 1117 aa18.23■□□□□ 0.51
SREBF1-217ENST00000577897 NBPF5PQ86XG9 351 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-217ENST00000577897 RTKN2Q8IZC4 609 aa18.23■□□□□ 0.51
SREBF1-217ENST00000577897 ZNF496Q96IT1 587 aaPredicted RBP18.23■□□□□ 0.51
SREBF1-217ENST00000577897 PNNQ9H307 717 aaKnown RBP18.23■□□□□ 0.51
SREBF1-217ENST00000577897 BCORQ6W2J9 1755 aa18.22■□□□□ 0.51
SREBF1-217ENST00000577897 HEG1Q9ULI3 1381 aa18.22■□□□□ 0.51
SREBF1-217ENST00000577897 TRAF5O00463 557 aa18.22■□□□□ 0.51
SREBF1-217ENST00000577897 MTHFSDQ2M296 383 aaKnown RBP18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms