RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 PXDNLA1KZ92 1463 aa11.97□□□□□ -0.49
CDKN2A-211ENST00000577854 DUSP27Q5VZP5 1158 aa11.97□□□□□ -0.49
CDKN2A-211ENST00000577854 TTLL7Q6ZT98 887 aa11.97□□□□□ -0.49
CDKN2A-211ENST00000577854 ERBB4Q15303 1308 aa11.96□□□□□ -0.49
CDKN2A-211ENST00000577854 GPTP24298 496 aa11.96□□□□□ -0.49
CDKN2A-211ENST00000577854 CLEC4GQ6UXB4 293 aa11.96□□□□□ -0.49
CDKN2A-211ENST00000577854 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
CDKN2A-211ENST00000577854 PIM2Q9P1W9 311 aa11.96□□□□□ -0.49
CDKN2A-211ENST00000577854 CHPF2Q9P2E5 772 aa11.96□□□□□ -0.49
CDKN2A-211ENST00000577854 LAMB4A4D0S4 1761 aa11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 MAP3K15Q6ZN16 1313 aa11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 SCN7AQ01118 1682 aa11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 HLFQ16534 295 aa11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 PROSER3Q2NL68 480 aa11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 DALRD3Q5D0E6 543 aaKnown RBP11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 C2CD5Q86YS7 1000 aa11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 WWC1Q8IX03 1113 aa11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 ZNF622Q969S3 477 aaKnown RBP eCLIP11.95□□□□□ -0.5
CDKN2A-211ENST00000577854 UTRNP46939 3433 aa11.94□□□□□ -0.5
CDKN2A-211ENST00000577854 H0YIN7 160 aa11.94□□□□□ -0.5
CDKN2A-211ENST00000577854 HOXB7P09629 217 aa11.94□□□□□ -0.5
CDKN2A-211ENST00000577854 PRR5LQ6MZQ0 368 aa11.94□□□□□ -0.5
CDKN2A-211ENST00000577854 ARHGAP27Q6ZUM4 889 aa11.94□□□□□ -0.5
CDKN2A-211ENST00000577854 COPS6Q7L5N1 327 aa11.94□□□□□ -0.5
CDKN2A-211ENST00000577854 XAGE3Q8WTP9 111 aa11.94□□□□□ -0.5
CDKN2A-211ENST00000577854 DDX21Q9NR30 783 aaKnown RBP eCLIP11.94□□□□□ -0.5
CDKN2A-211ENST00000577854 ERVV-1B6SEH8 477 aa11.93□□□□□ -0.5
CDKN2A-211ENST00000577854 ZNF853P0CG23 659 aa11.93□□□□□ -0.5
CDKN2A-211ENST00000577854 PDE6BP35913 854 aa11.93□□□□□ -0.5
CDKN2A-211ENST00000577854 CCDC27Q2M243 656 aa11.93□□□□□ -0.5
CDKN2A-211ENST00000577854 DIEXFQ68CQ4 756 aaKnown RBP11.93□□□□□ -0.5
CDKN2A-211ENST00000577854 TPTE2Q6XPS3 522 aa11.93□□□□□ -0.5
CDKN2A-211ENST00000577854 ZNF219Q9P2Y4 722 aaPredicted RBP11.93□□□□□ -0.5
CDKN2A-211ENST00000577854 DBF4Q9UBU7 674 aaPredicted RBP11.93□□□□□ -0.5
CDKN2A-211ENST00000577854 PDIA6Q15084 440 aa11.92□□□□□ -0.5
CDKN2A-211ENST00000577854 C8orf58Q8NAV2 365 aa11.92□□□□□ -0.5
CDKN2A-211ENST00000577854 BRIP1Q9BX63 1249 aa11.92□□□□□ -0.5
CDKN2A-211ENST00000577854 NYXQ9GZU5 481 aa11.92□□□□□ -0.5
CDKN2A-211ENST00000577854 TCERG1O14776 1098 aaKnown RBP11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 GOLGA2Q08379 1002 aa11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 CCDC30Q5VVM6 783 aa11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 NUTM1Q86Y26 1132 aa11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 TTLL6Q8N841 843 aa11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 ZNF428Q96B54 188 aa11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 STK31Q9BXU1 1019 aa11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 CHMP4AQ9BY43 222 aa11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 HYPKQ9NX55 129 aa11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 N4BP2Q86UW6 1770 aaPredicted RBP11.91□□□□□ -0.5
CDKN2A-211ENST00000577854 KCNA3P22001 575 aa11.9□□□□□ -0.5
CDKN2A-211ENST00000577854 HSP90AB3PQ58FF7 597 aa11.9□□□□□ -0.5
CDKN2A-211ENST00000577854 GIGYF2Q6Y7W6 1299 aaKnown RBP11.9□□□□□ -0.5
CDKN2A-211ENST00000577854 PPP1R42Q7Z4L9 355 aa11.9□□□□□ -0.5
CDKN2A-211ENST00000577854 TSPYL6Q8N831 410 aa11.9□□□□□ -0.5
CDKN2A-211ENST00000577854 BCORQ6W2J9 1755 aa11.9□□□□□ -0.51
CDKN2A-211ENST00000577854 IL16Q14005 1332 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 FANCIQ9NVI1 1328 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 ATP10DQ9P241 1426 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 RGL2O15211 777 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 TWISTNBQ3B726 338 aaPredicted RBP11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 PARP10Q53GL7 1025 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 RIC3Q7Z5B4 369 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 WDR63Q8IWG1 891 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 ZNF526Q8TF50 670 aaPredicted RBP11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 MYH16Q9H6N6 1097 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 PDZRN3Q9UPQ7 1066 aa11.89□□□□□ -0.51
CDKN2A-211ENST00000577854 UBN2Q6ZU65 1347 aa11.88□□□□□ -0.51
CDKN2A-211ENST00000577854 CCER2I3L3R5 266 aa11.88□□□□□ -0.51
CDKN2A-211ENST00000577854 ERFEQ4G0M1 354 aa11.88□□□□□ -0.51
CDKN2A-211ENST00000577854 SUSD4Q5VX71 490 aa11.88□□□□□ -0.51
CDKN2A-211ENST00000577854 ANKRD13DQ6ZTN6 518 aa11.88□□□□□ -0.51
CDKN2A-211ENST00000577854 PLBD2Q8NHP8 589 aa11.88□□□□□ -0.51
CDKN2A-211ENST00000577854 RPGRQ92834 1020 aaKnown RBP11.88□□□□□ -0.51
CDKN2A-211ENST00000577854 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
CDKN2A-211ENST00000577854 ATP5J2-PTCD1G3V325 749 aa11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 C21orf2O43822 256 aa11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 DDX58O95786 925 aaKnown RBP11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 EXOSC9Q06265 439 aaKnown RBP11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 LRP10Q7Z4F1 713 aa11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 ZNF784Q8NCA9 323 aaPredicted RBP11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 CNKSR1Q969H4 720 aa11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 MASTLQ96GX5 879 aa11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 PHAXQ9H814 394 aaKnown RBP11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 TRMT112Q9UI30 125 aaKnown RBP11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 AFDNP55196 1824 aaKnown RBP11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 KIF13BQ9NQT8 1826 aa11.87□□□□□ -0.51
CDKN2A-211ENST00000577854 SRGNP10124 158 aa11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 NPR1P16066 1061 aa11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 TCIRG1Q13488 830 aa11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 NCBP3Q53F19 620 aaKnown RBP11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 PRPF40BQ6NWY9 871 aaKnown RBP11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 ZNF34Q8IZ26 560 aa11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 RNF181Q9P0P0 153 aa11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 ABCC12Q96J65 1359 aa11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 NRXN2Q9P2S2 1712 aa11.86□□□□□ -0.51
CDKN2A-211ENST00000577854 NTSR2O95665 410 aa11.85□□□□□ -0.51
CDKN2A-211ENST00000577854 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
CDKN2A-211ENST00000577854 RASSF7Q02833 373 aa11.85□□□□□ -0.51
CDKN2A-211ENST00000577854 RTL5Q5HYW3 569 aaPredicted RBP11.85□□□□□ -0.51
CDKN2A-211ENST00000577854 C9orf131Q5VYM1 1079 aa11.85□□□□□ -0.51
CDKN2A-211ENST00000577854 STYK1Q6J9G0 422 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms