RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
MKS1-206ENST00000577824 GYS1P13807 737 aa16.26■□□□□ 0.19
MKS1-206ENST00000577824 RFC4P35249 363 aa16.26■□□□□ 0.19
MKS1-206ENST00000577824 CLEC4GQ6UXB4 293 aa16.26■□□□□ 0.19
MKS1-206ENST00000577824 KIF6Q6ZMV9 814 aa16.26■□□□□ 0.19
MKS1-206ENST00000577824 NPM2Q86SE8 214 aaKnown RBP16.26■□□□□ 0.19
MKS1-206ENST00000577824 BCL2L12Q9HB09 334 aa16.26■□□□□ 0.19
MKS1-206ENST00000577824 SMC4Q9NTJ3 1288 aa16.26■□□□□ 0.19
MKS1-206ENST00000577824 NUP98P52948 1817 aa16.25■□□□□ 0.19
MKS1-206ENST00000577824 TCERG1O14776 1098 aaKnown RBP16.25■□□□□ 0.19
MKS1-206ENST00000577824 G2E3Q7L622 706 aa16.25■□□□□ 0.19
MKS1-206ENST00000577824 PLBD2Q8NHP8 589 aa16.25■□□□□ 0.19
MKS1-206ENST00000577824 PDGFDQ9GZP0 370 aaPredicted RBP16.25■□□□□ 0.19
MKS1-206ENST00000577824 ZNF330Q9Y3S2 320 aaPredicted RBP16.25■□□□□ 0.19
MKS1-206ENST00000577824 NRXN2Q9P2S2 1712 aa16.25■□□□□ 0.19
MKS1-206ENST00000577824 IBTKQ9P2D0 1353 aaPredicted RBP16.25■□□□□ 0.19
MKS1-206ENST00000577824 ZPR1O75312 459 aa16.24■□□□□ 0.19
MKS1-206ENST00000577824 USPL1Q5W0Q7 1092 aa16.24■□□□□ 0.19
MKS1-206ENST00000577824 GIGYF2Q6Y7W6 1299 aaKnown RBP16.24■□□□□ 0.19
MKS1-206ENST00000577824 SRP68Q9UHB9 627 aaKnown RBP16.24■□□□□ 0.19
MKS1-206ENST00000577824 TBC1D2BQ9UPU7 963 aa16.24■□□□□ 0.19
MKS1-206ENST00000577824 PSDA5PKW4 1024 aaPredicted RBP16.23■□□□□ 0.19
MKS1-206ENST00000577824 DDX58O95786 925 aaKnown RBP16.23■□□□□ 0.19
MKS1-206ENST00000577824 ANKRD13DQ6ZTN6 518 aa16.23■□□□□ 0.19
MKS1-206ENST00000577824 BCL2L13Q9BXK5 485 aa16.23■□□□□ 0.19
MKS1-206ENST00000577824 RCAN3Q9UKA8 241 aa16.23■□□□□ 0.19
MKS1-206ENST00000577824 ZNF652Q9Y2D9 606 aa16.23■□□□□ 0.19
MKS1-206ENST00000577824 AIMP1Q12904 312 aaKnown RBP16.22■□□□□ 0.19
MKS1-206ENST00000577824 KSR2Q6VAB6 950 aa16.22■□□□□ 0.19
MKS1-206ENST00000577824 ARHGAP45Q92619 1136 aa16.22■□□□□ 0.19
MKS1-206ENST00000577824 MTFR1LQ9H019 292 aa16.22■□□□□ 0.19
MKS1-206ENST00000577824 LRP5O75197 1615 aa16.21■□□□□ 0.19
MKS1-206ENST00000577824 BCAR3O75815 825 aa16.21■□□□□ 0.19
MKS1-206ENST00000577824 FKBP5Q13451 457 aaPredicted RBP16.21■□□□□ 0.19
MKS1-206ENST00000577824 FKBP8Q14318 412 aa16.21■□□□□ 0.19
MKS1-206ENST00000577824 HLFQ16534 295 aa16.21■□□□□ 0.19
MKS1-206ENST00000577824 NLGN1Q8N2Q7 840 aa16.21■□□□□ 0.19
MKS1-206ENST00000577824 ZBTB3Q9H5J0 574 aa16.21■□□□□ 0.19
MKS1-206ENST00000577824 PI4KAP2A4QPH2 592 aa16.2■□□□□ 0.18
MKS1-206ENST00000577824 HSP90AB3PQ58FF7 597 aa16.2■□□□□ 0.18
MKS1-206ENST00000577824 PI4KAP1Q8N8J0 262 aa16.2■□□□□ 0.18
MKS1-206ENST00000577824 SGIP1Q9BQI5 828 aa16.2■□□□□ 0.18
MKS1-206ENST00000577824 CARMIL3Q8ND23 1372 aa16.2■□□□□ 0.18
MKS1-206ENST00000577824 TM4SF1P30408 202 aa16.19■□□□□ 0.18
MKS1-206ENST00000577824 TRIM28Q13263 835 aaKnown RBP16.19■□□□□ 0.18
MKS1-206ENST00000577824 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
MKS1-206ENST00000577824 METTL22Q9BUU2 404 aaPredicted RBP16.19■□□□□ 0.18
MKS1-206ENST00000577824 ABCC4O15439 1325 aa16.19■□□□□ 0.18
MKS1-206ENST00000577824 MSH5O43196 834 aa16.18■□□□□ 0.18
MKS1-206ENST00000577824 TCIRG1Q13488 830 aa16.18■□□□□ 0.18
MKS1-206ENST00000577824 TBC1D9BQ66K14 1250 aa16.18■□□□□ 0.18
MKS1-206ENST00000577824 RIC3Q7Z5B4 369 aa16.18■□□□□ 0.18
MKS1-206ENST00000577824 DNAAF4Q8WXU2 420 aa16.18■□□□□ 0.18
MKS1-206ENST00000577824 ISCA1Q9BUE6 129 aa16.18■□□□□ 0.18
MKS1-206ENST00000577824 NOB1Q9ULX3 412 aaKnown RBP16.18■□□□□ 0.18
MKS1-206ENST00000577824 MAP3K2Q9Y2U5 619 aa16.18■□□□□ 0.18
MKS1-206ENST00000577824 UBN2Q6ZU65 1347 aa16.18■□□□□ 0.18
MKS1-206ENST00000577824 NFIXQ14938 502 aa16.17■□□□□ 0.18
MKS1-206ENST00000577824 ATF7IPQ6VMQ6 1270 aa16.17■□□□□ 0.18
MKS1-206ENST00000577824 API5Q9BZZ5 524 aaKnown RBP16.17■□□□□ 0.18
MKS1-206ENST00000577824 RIC1Q4ADV7 1423 aa16.17■□□□□ 0.18
MKS1-206ENST00000577824 AFDNP55196 1824 aaKnown RBP16.17■□□□□ 0.18
MKS1-206ENST00000577824 RNF123Q5XPI4 1314 aa16.17■□□□□ 0.18
MKS1-206ENST00000577824 LAMB2P55268 1798 aa16.16■□□□□ 0.18
MKS1-206ENST00000577824 POLRMTO00411 1230 aaKnown RBP16.16■□□□□ 0.18
MKS1-206ENST00000577824 IPO8O15397 1037 aaKnown RBP16.16■□□□□ 0.18
MKS1-206ENST00000577824 ZBTB7AO95365 584 aa16.16■□□□□ 0.18
MKS1-206ENST00000577824 TRIM27P14373 513 aa16.16■□□□□ 0.18
MKS1-206ENST00000577824 DDR1Q08345 913 aa16.16■□□□□ 0.18
MKS1-206ENST00000577824 PARP10Q53GL7 1025 aa16.16■□□□□ 0.18
MKS1-206ENST00000577824 KIF13BQ9NQT8 1826 aa16.16■□□□□ 0.18
MKS1-206ENST00000577824 F6X3S4 739 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 IGKV5-2P06315 115 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 KCNA4P22459 653 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 PTGER2P43116 358 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 BEND3Q5T5X7 828 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 ZKSCAN2Q63HK3 967 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 C10orf71Q711Q0 1435 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 LINS1Q8NG48 757 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 ARXQ96QS3 562 aa16.15■□□□□ 0.18
MKS1-206ENST00000577824 MMP10P09238 476 aa16.14■□□□□ 0.17
MKS1-206ENST00000577824 NEXNQ0ZGT2 675 aa16.14■□□□□ 0.17
MKS1-206ENST00000577824 NLRP10Q86W26 655 aa16.14■□□□□ 0.17
MKS1-206ENST00000577824 CCDC191Q8NCU4 936 aa16.14■□□□□ 0.17
MKS1-206ENST00000577824 MYD88Q99836 296 aa16.14■□□□□ 0.17
MKS1-206ENST00000577824 NIP7Q9Y221 180 aaKnown RBP eCLIP16.14■□□□□ 0.17
MKS1-206ENST00000577824 NEURL1BA8MQ27 555 aa16.13■□□□□ 0.17
MKS1-206ENST00000577824 NTSR2O95665 410 aa16.13■□□□□ 0.17
MKS1-206ENST00000577824 SETDB2Q96T68 719 aa16.13■□□□□ 0.17
MKS1-206ENST00000577824 SPON1Q9HCB6 807 aa16.13■□□□□ 0.17
MKS1-206ENST00000577824 ALDH1L1O75891 902 aa16.12■□□□□ 0.17
MKS1-206ENST00000577824 FRAT1Q92837 279 aaPredicted RBP16.12■□□□□ 0.17
MKS1-206ENST00000577824 DDX60Q8IY21 1712 aaKnown RBP16.11■□□□□ 0.17
MKS1-206ENST00000577824 KIAA1551Q9HCM1 1747 aa16.11■□□□□ 0.17
MKS1-206ENST00000577824 GPTP24298 496 aa16.11■□□□□ 0.17
MKS1-206ENST00000577824 POLD1P28340 1107 aa16.11■□□□□ 0.17
MKS1-206ENST00000577824 SUSD4Q5VX71 490 aa16.11■□□□□ 0.17
MKS1-206ENST00000577824 INTS3Q68E01 1043 aaKnown RBP16.11■□□□□ 0.17
MKS1-206ENST00000577824 NYXQ9GZU5 481 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms