RNA–Protein interactions for RNA: ENST00000577779.1

PPP4R1-206, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 2

Gene PPP4R1, Length 481 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-206ENST00000577779 LGR6Q9HBX8 967 aa19.37■□□□□ 0.69
PPP4R1-206ENST00000577779 ADAMTSL1Q8N6G6 1762 aa19.37■□□□□ 0.69
PPP4R1-206ENST00000577779 ZNF541Q9H0D2 1346 aa19.36■□□□□ 0.69
PPP4R1-206ENST00000577779 NPHP1O15259 732 aa19.36■□□□□ 0.69
PPP4R1-206ENST00000577779 EIF5P55010 431 aaKnown RBP19.36■□□□□ 0.69
PPP4R1-206ENST00000577779 PNMA8AQ86V59 439 aaPredicted RBP19.36■□□□□ 0.69
PPP4R1-206ENST00000577779 VSIG10Q8N0Z9 540 aa19.36■□□□□ 0.69
PPP4R1-206ENST00000577779 CFAP44Q96MT7 982 aa19.36■□□□□ 0.69
PPP4R1-206ENST00000577779 ARFGEF2Q9Y6D5 1785 aa19.35■□□□□ 0.69
PPP4R1-206ENST00000577779 CNBD1Q8NA66 436 aa19.35■□□□□ 0.69
PPP4R1-206ENST00000577779 MRC1P22897 1456 aa19.35■□□□□ 0.69
PPP4R1-206ENST00000577779 SCN7AQ01118 1682 aa19.34■□□□□ 0.69
PPP4R1-206ENST00000577779 STARD3NLO95772 234 aa19.34■□□□□ 0.69
PPP4R1-206ENST00000577779 SRGNP10124 158 aa19.34■□□□□ 0.69
PPP4R1-206ENST00000577779 PAXIP1Q6ZW49 1069 aaPredicted RBP19.34■□□□□ 0.69
PPP4R1-206ENST00000577779 MASTLQ96GX5 879 aa19.34■□□□□ 0.69
PPP4R1-206ENST00000577779 RNMTO43148 476 aaKnown RBP19.33■□□□□ 0.68
PPP4R1-206ENST00000577779 ST5P78524 1137 aa19.33■□□□□ 0.68
PPP4R1-206ENST00000577779 CCDC93Q567U6 631 aa19.33■□□□□ 0.68
PPP4R1-206ENST00000577779 THSD7BQ9C0I4 1608 aa19.33■□□□□ 0.68
PPP4R1-206ENST00000577779 RNF123Q5XPI4 1314 aa19.32■□□□□ 0.68
PPP4R1-206ENST00000577779 GRM1Q13255 1194 aa19.32■□□□□ 0.68
PPP4R1-206ENST00000577779 POTEDQ86YR6 584 aa19.32■□□□□ 0.68
PPP4R1-206ENST00000577779 CAPNS2Q96L46 248 aa19.32■□□□□ 0.68
PPP4R1-206ENST00000577779 SETDB2Q96T68 719 aa19.32■□□□□ 0.68
PPP4R1-206ENST00000577779 ZNF277Q9NRM2 450 aaPredicted RBP19.32■□□□□ 0.68
PPP4R1-206ENST00000577779 TBC1D2BQ9UPU7 963 aa19.32■□□□□ 0.68
PPP4R1-206ENST00000577779 ZNF330Q9Y3S2 320 aaPredicted RBP19.32■□□□□ 0.68
PPP4R1-206ENST00000577779 ECE1P42892 770 aa19.31■□□□□ 0.68
PPP4R1-206ENST00000577779 GPR101Q96P66 508 aaPredicted RBP19.31■□□□□ 0.68
PPP4R1-206ENST00000577779 DDX21Q9NR30 783 aaKnown RBP eCLIP19.31■□□□□ 0.68
PPP4R1-206ENST00000577779 UBR2Q8IWV8 1755 aa19.3■□□□□ 0.68
PPP4R1-206ENST00000577779 FKBP4Q02790 459 aaKnown RBP eCLIP19.3■□□□□ 0.68
PPP4R1-206ENST00000577779 C7orf43Q8WVR3 580 aa19.3■□□□□ 0.68
PPP4R1-206ENST00000577779 POLR3GLQ9BT43 218 aa19.3■□□□□ 0.68
PPP4R1-206ENST00000577779 TSKSQ9UJT2 592 aa19.3■□□□□ 0.68
PPP4R1-206ENST00000577779 CYP4F22Q6NT55 531 aa19.29■□□□□ 0.68
PPP4R1-206ENST00000577779 TTC5Q8N0Z6 440 aa19.28■□□□□ 0.68
PPP4R1-206ENST00000577779 MCOLN1Q9GZU1 580 aa19.28■□□□□ 0.68
PPP4R1-206ENST00000577779 NPM3O75607 178 aaKnown RBP19.27■□□□□ 0.68
PPP4R1-206ENST00000577779 NPM2Q86SE8 214 aaKnown RBP19.27■□□□□ 0.68
PPP4R1-206ENST00000577779 GPC2Q8N158 579 aa19.27■□□□□ 0.68
PPP4R1-206ENST00000577779 IL13P35225 146 aa19.26■□□□□ 0.67
PPP4R1-206ENST00000577779 FZD9O00144 591 aa19.25■□□□□ 0.67
PPP4R1-206ENST00000577779 NPR1P16066 1061 aa19.25■□□□□ 0.67
PPP4R1-206ENST00000577779 IL6STP40189 918 aaPredicted RBP19.25■□□□□ 0.67
PPP4R1-206ENST00000577779 FMR1Q06787 632 aaKnown RBP eCLIP19.25■□□□□ 0.672e-6■■■■□ 20.3
PPP4R1-206ENST00000577779 OLFM4Q6UX06 510 aa19.25■□□□□ 0.67
PPP4R1-206ENST00000577779 MORC1Q86VD1 984 aa19.25■□□□□ 0.67
PPP4R1-206ENST00000577779 RTKN2Q8IZC4 609 aa19.25■□□□□ 0.67
PPP4R1-206ENST00000577779 LTBP1Q14766 1721 aa19.25■□□□□ 0.67
PPP4R1-206ENST00000577779 AOC2O75106 756 aa19.24■□□□□ 0.67
PPP4R1-206ENST00000577779 CAMTA2O94983 1202 aa19.24■□□□□ 0.67
PPP4R1-206ENST00000577779 IARSP41252 1262 aaKnown RBP19.24■□□□□ 0.67
PPP4R1-206ENST00000577779 TEX13AQ9BXU3 409 aaPredicted RBP19.24■□□□□ 0.67
PPP4R1-206ENST00000577779 CASP8AP2Q9UKL3 1982 aa19.24■□□□□ 0.67
PPP4R1-206ENST00000577779 TRPM7Q96QT4 1865 aa19.23■□□□□ 0.67
PPP4R1-206ENST00000577779 MAP2K2P36507 400 aa19.23■□□□□ 0.67
PPP4R1-206ENST00000577779 NBPF5PQ86XG9 351 aaPredicted RBP19.23■□□□□ 0.67
PPP4R1-206ENST00000577779 CA12O43570 354 aa19.22■□□□□ 0.67
PPP4R1-206ENST00000577779 LMOD1P29536 600 aaPredicted RBP19.22■□□□□ 0.67
PPP4R1-206ENST00000577779 SYNE4Q8N205 404 aa19.22■□□□□ 0.67
PPP4R1-206ENST00000577779 ZNF496Q96IT1 587 aaPredicted RBP19.22■□□□□ 0.67
PPP4R1-206ENST00000577779 GJA3Q9Y6H8 435 aa19.22■□□□□ 0.67
PPP4R1-206ENST00000577779 TLL2Q9Y6L7 1015 aa19.22■□□□□ 0.67
PPP4R1-206ENST00000577779 HEG1Q9ULI3 1381 aa19.21■□□□□ 0.67
PPP4R1-206ENST00000577779 DGKZQ13574 1117 aa19.21■□□□□ 0.67
PPP4R1-206ENST00000577779 MTHFSDQ2M296 383 aaKnown RBP19.21■□□□□ 0.67
PPP4R1-206ENST00000577779 CST9Q5W186 159 aa19.21■□□□□ 0.67
PPP4R1-206ENST00000577779 JDP2Q8WYK2 163 aa19.21■□□□□ 0.67
PPP4R1-206ENST00000577779 BCORQ6W2J9 1755 aa19.2■□□□□ 0.66
PPP4R1-206ENST00000577779 TRAF5O00463 557 aa19.2■□□□□ 0.66
PPP4R1-206ENST00000577779 HMOX1P09601 288 aa19.2■□□□□ 0.66
PPP4R1-206ENST00000577779 DZIP3Q86Y13 1208 aaKnown RBP19.2■□□□□ 0.66
PPP4R1-206ENST00000577779 PANK3Q9H999 370 aa19.2■□□□□ 0.66
PPP4R1-206ENST00000577779 A1BGP04217 495 aa19.19■□□□□ 0.66
PPP4R1-206ENST00000577779 EIF6P56537 245 aaKnown RBP19.19■□□□□ 0.66
PPP4R1-206ENST00000577779 KLRG2A4D1S0 409 aaPredicted RBP19.18■□□□□ 0.66
PPP4R1-206ENST00000577779 ZNF790Q6PG37 636 aa19.18■□□□□ 0.66
PPP4R1-206ENST00000577779 EPS15P42566 896 aa19.17■□□□□ 0.66
PPP4R1-206ENST00000577779 ALDH1B1P30837 517 aa19.16■□□□□ 0.66
PPP4R1-206ENST00000577779 SCNN1DP51172 638 aa19.16■□□□□ 0.66
PPP4R1-206ENST00000577779 BRPF1P55201 1214 aaPredicted RBP19.16■□□□□ 0.66
PPP4R1-206ENST00000577779 TEFQ10587 303 aa19.16■□□□□ 0.66
PPP4R1-206ENST00000577779 USP50Q70EL3 339 aaPredicted RBP19.16■□□□□ 0.66
PPP4R1-206ENST00000577779 PSMD1Q99460 953 aa19.16■□□□□ 0.66
PPP4R1-206ENST00000577779 CLEC4GQ6UXB4 293 aa19.15■□□□□ 0.66
PPP4R1-206ENST00000577779 TPTE2Q6XPS3 522 aa19.15■□□□□ 0.66
PPP4R1-206ENST00000577779 FMNL2Q96PY5 1086 aa19.15■□□□□ 0.66
PPP4R1-206ENST00000577779 ZNF652Q9Y2D9 606 aa19.15■□□□□ 0.66
PPP4R1-206ENST00000577779 SAPCD2Q86UD0 394 aa19.14■□□□□ 0.65
PPP4R1-206ENST00000577779 COL4A5P29400 1685 aa19.14■□□□□ 0.65
PPP4R1-206ENST00000577779 CELF2O95319 508 aaKnown RBP19.13■□□□□ 0.65
PPP4R1-206ENST00000577779 RNF216Q9NWF9 866 aaPredicted RBP19.13■□□□□ 0.65
PPP4R1-206ENST00000577779 FAM177BA6PVY3 158 aa19.12■□□□□ 0.65
PPP4R1-206ENST00000577779 PIP4K2AP48426 406 aaPredicted RBP19.12■□□□□ 0.65
PPP4R1-206ENST00000577779 CIAPIN1Q6FI81 312 aa19.12■□□□□ 0.65
PPP4R1-206ENST00000577779 NIP7Q9Y221 180 aaKnown RBP eCLIP19.12■□□□□ 0.65
PPP4R1-206ENST00000577779 SNED1Q8TER0 1413 aa19.11■□□□□ 0.65
PPP4R1-206ENST00000577779 SOX10P56693 466 aa19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 210.2 ms