RNA–Protein interactions for RNA: ENST00000577605.1

CASC3-205, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 714 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-205ENST00000577605 PPP1R1BQ9UD71 204 aaPredicted RBP9.38□□□□□ -0.91
CASC3-205ENST00000577605 SHANK3Q9BYB0 1731 aa9.37□□□□□ -0.91
CASC3-205ENST00000577605 COL3A1P02461 1466 aaPredicted RBP9.37□□□□□ -0.91
CASC3-205ENST00000577605 GNAT3A8MTJ3 354 aa9.37□□□□□ -0.91
CASC3-205ENST00000577605 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
CASC3-205ENST00000577605 TBC1D12O60347 775 aa9.37□□□□□ -0.91
CASC3-205ENST00000577605 U2AF1L5P0DN76 240 aaPredicted RBP9.37□□□□□ -0.91
CASC3-205ENST00000577605 U2AF1Q01081 240 aaKnown RBP eCLIP9.37□□□□□ -0.911e-9■■□□□ 11.6
CASC3-205ENST00000577605 DDX10Q13206 875 aaKnown RBP9.37□□□□□ -0.91
CASC3-205ENST00000577605 MTHFSDQ2M296 383 aaKnown RBP9.37□□□□□ -0.91
CASC3-205ENST00000577605 RC3H1Q5TC82 1133 aaKnown RBP9.37□□□□□ -0.91
CASC3-205ENST00000577605 ZNF687Q8N1G0 1237 aa9.37□□□□□ -0.91
CASC3-205ENST00000577605 NFATC2IPQ8NCF5 419 aa9.37□□□□□ -0.91
CASC3-205ENST00000577605 AK7Q96M32 723 aa9.37□□□□□ -0.91
CASC3-205ENST00000577605 SLC52A2Q9HAB3 445 aa9.37□□□□□ -0.91
CASC3-205ENST00000577605 SLC24A3Q9HC58 644 aa9.37□□□□□ -0.91
CASC3-205ENST00000577605 DOT1LQ8TEK3 1739 aa9.36□□□□□ -0.91
CASC3-205ENST00000577605 BTAF1O14981 1849 aa9.36□□□□□ -0.91
CASC3-205ENST00000577605 RNMTO43148 476 aaKnown RBP9.36□□□□□ -0.91
CASC3-205ENST00000577605 POLD1P28340 1107 aa9.36□□□□□ -0.91
CASC3-205ENST00000577605 ATP6V1AP38606 617 aa9.36□□□□□ -0.91
CASC3-205ENST00000577605 ZNF827Q17R98 1081 aa9.36□□□□□ -0.91
CASC3-205ENST00000577605 ASAP1Q9ULH1 1129 aa9.36□□□□□ -0.91
CASC3-205ENST00000577605 SSFA2P28290 1259 aa9.35□□□□□ -0.91
CASC3-205ENST00000577605 PRKAR2BP31323 418 aa9.35□□□□□ -0.91
CASC3-205ENST00000577605 TEFQ10587 303 aa9.35□□□□□ -0.91
CASC3-205ENST00000577605 RTF1Q92541 710 aaKnown RBP9.35□□□□□ -0.91
CASC3-205ENST00000577605 RSPH6AQ9H0K4 717 aa9.35□□□□□ -0.91
CASC3-205ENST00000577605 PAPPAQ13219 1627 aa9.34□□□□□ -0.91
CASC3-205ENST00000577605 PNPLA7Q6ZV29 1317 aa9.34□□□□□ -0.91
CASC3-205ENST00000577605 MYBBP1AQ9BQG0 1328 aaKnown RBP9.34□□□□□ -0.91
CASC3-205ENST00000577605 KDM6AO15550 1401 aaPredicted RBP9.34□□□□□ -0.91
CASC3-205ENST00000577605 ZBTB7AO95365 584 aa9.34□□□□□ -0.91
CASC3-205ENST00000577605 TEX13AQ9BXU3 409 aaPredicted RBP9.34□□□□□ -0.91
CASC3-205ENST00000577605 EMILIN3Q9NT22 766 aa9.34□□□□□ -0.91
CASC3-205ENST00000577605 MAP3K5Q99683 1374 aa9.34□□□□□ -0.91
CASC3-205ENST00000577605 PTGER2P43116 358 aa9.33□□□□□ -0.92
CASC3-205ENST00000577605 TTC5Q8N0Z6 440 aa9.33□□□□□ -0.92
CASC3-205ENST00000577605 LGR6Q9HBX8 967 aa9.33□□□□□ -0.92
CASC3-205ENST00000577605 RTCBQ9Y3I0 505 aaKnown RBP9.33□□□□□ -0.92
CASC3-205ENST00000577605 LY75O60449 1722 aa9.33□□□□□ -0.92
CASC3-205ENST00000577605 CNTNAP4Q9C0A0 1308 aa9.32□□□□□ -0.92
CASC3-205ENST00000577605 KCNQ4P56696 695 aa9.32□□□□□ -0.92
CASC3-205ENST00000577605 COL23A1Q86Y22 540 aaPredicted RBP9.32□□□□□ -0.92
CASC3-205ENST00000577605 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.31□□□□□ -0.92
CASC3-205ENST00000577605 RPS6KA4O75676 772 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 ITPK1Q13572 414 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 TRAPPC3LQ5T215 181 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 LINC00116Q8NCU8 138 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 IL17REQ8NFR9 667 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 PNISRQ8TF01 805 aaKnown RBP9.31□□□□□ -0.92
CASC3-205ENST00000577605 PHACTR3Q96KR7 559 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 PDGFDQ9GZP0 370 aaPredicted RBP9.31□□□□□ -0.92
CASC3-205ENST00000577605 CEMIPQ8WUJ3 1361 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 MRC1P22897 1456 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 ZNF831Q5JPB2 1677 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 MAPK8IP3Q9UPT6 1336 aa9.31□□□□□ -0.92
CASC3-205ENST00000577605 CASZ1Q86V15 1759 aa9.3□□□□□ -0.92
CASC3-205ENST00000577605 GNPATO15228 680 aa9.3□□□□□ -0.92
CASC3-205ENST00000577605 PTCD1O75127 700 aaKnown RBP9.3□□□□□ -0.92
CASC3-205ENST00000577605 STARD3NLO95772 234 aa9.3□□□□□ -0.92
CASC3-205ENST00000577605 LMOD3Q0VAK6 560 aa9.3□□□□□ -0.92
CASC3-205ENST00000577605 ZNF790Q6PG37 636 aa9.3□□□□□ -0.92
CASC3-205ENST00000577605 SPNS2Q8IVW8 549 aa9.3□□□□□ -0.92
CASC3-205ENST00000577605 NLGN1Q8N2Q7 840 aa9.3□□□□□ -0.92
CASC3-205ENST00000577605 PRKRIP1Q9H875 184 aaPredicted RBP9.3□□□□□ -0.92
CASC3-205ENST00000577605 TOGARAM1Q9Y4F4 1720 aa9.3□□□□□ -0.92
CASC3-205ENST00000577605 QSER1Q2KHR3 1735 aa9.29□□□□□ -0.92
CASC3-205ENST00000577605 RFC4P35249 363 aa9.29□□□□□ -0.92
CASC3-205ENST00000577605 MAP3K9P80192 1104 aa9.29□□□□□ -0.92
CASC3-205ENST00000577605 CAMK2BQ13554 666 aa9.29□□□□□ -0.92
CASC3-205ENST00000577605 WDR43Q15061 677 aaKnown RBP eCLIP9.29□□□□□ -0.92
CASC3-205ENST00000577605 ARHGEF1Q92888 912 aaKnown RBP9.29□□□□□ -0.92
CASC3-205ENST00000577605 FMNL2Q96PY5 1086 aa9.29□□□□□ -0.92
CASC3-205ENST00000577605 SLC4A9Q96Q91 983 aa9.29□□□□□ -0.92
CASC3-205ENST00000577605 PLEKHF1Q96S99 279 aa9.29□□□□□ -0.92
CASC3-205ENST00000577605 BABAM1Q9NWV8 329 aa9.29□□□□□ -0.92
CASC3-205ENST00000577605 A0A087WZG4 1122 aa9.28□□□□□ -0.92
CASC3-205ENST00000577605 BTBD11A6QL63 1104 aa9.28□□□□□ -0.92
CASC3-205ENST00000577605 EVI5O60447 810 aa9.28□□□□□ -0.92
CASC3-205ENST00000577605 CRKLP46109 303 aaKnown RBP9.28□□□□□ -0.92
CASC3-205ENST00000577605 TAF7Q15545 349 aaPredicted RBP9.28□□□□□ -0.92
CASC3-205ENST00000577605 NFE2L2Q16236 605 aa9.28□□□□□ -0.92
CASC3-205ENST00000577605 SYT17Q9BSW7 474 aa9.28□□□□□ -0.92
CASC3-205ENST00000577605 CD2APQ9Y5K6 639 aa9.28□□□□□ -0.92
CASC3-205ENST00000577605 C5P01031 1676 aa9.27□□□□□ -0.93
CASC3-205ENST00000577605 ADAMTS7Q9UKP4 1686 aa9.27□□□□□ -0.93
CASC3-205ENST00000577605 PHF14O94880 888 aa9.27□□□□□ -0.93
CASC3-205ENST00000577605 CYP19A1P11511 503 aaPredicted RBP9.27□□□□□ -0.93
CASC3-205ENST00000577605 POTEEQ6S8J3 1075 aa9.27□□□□□ -0.93
CASC3-205ENST00000577605 FHDC1Q9C0D6 1143 aaPredicted RBP9.27□□□□□ -0.93
CASC3-205ENST00000577605 CCDC87Q9NVE4 849 aa9.27□□□□□ -0.93
CASC3-205ENST00000577605 C4BP0C0L5 1744 aa9.27□□□□□ -0.93
CASC3-205ENST00000577605 ITGB4P16144 1822 aa9.26□□□□□ -0.93
CASC3-205ENST00000577605 HEG1Q9ULI3 1381 aa9.26□□□□□ -0.93
CASC3-205ENST00000577605 ZMYND10O75800 440 aa9.26□□□□□ -0.93
CASC3-205ENST00000577605 SNRPA1P09661 255 aaKnown RBP9.26□□□□□ -0.93
CASC3-205ENST00000577605 PBX2P40425 430 aa9.26□□□□□ -0.93
CASC3-205ENST00000577605 SLC39A6Q13433 755 aa9.26□□□□□ -0.93
CASC3-205ENST00000577605 PPP4R3BQ5MIZ7 849 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms