RNA–Protein interactions for RNA: ENST00000577554.5

TRIM37-204, Transcript of tripartite motif containing 37, humanhuman

TSL 1 (best)

Gene TRIM37, Length 4,310 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM37-204ENST00000577554 ERCC6L2Q5T890 1561 aa16.4■□□□□ 0.22
TRIM37-204ENST00000577554 TBC1D32Q96NH3 1257 aa16.4■□□□□ 0.22
TRIM37-204ENST00000577554 TSPY26PQ9H489 355 aa16.4■□□□□ 0.22
TRIM37-204ENST00000577554 CHL1O00533 1208 aa16.4■□□□□ 0.22
TRIM37-204ENST00000577554 CCT2P78371 535 aaKnown RBP16.4■□□□□ 0.22
TRIM37-204ENST00000577554 SLAIN2Q9P270 581 aa16.4■□□□□ 0.22
TRIM37-204ENST00000577554 SBNO1A3KN83 1393 aa16.4■□□□□ 0.22
TRIM37-204ENST00000577554 ZNF790Q6PG37 636 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 UGGT1Q9NYU2 1555 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 TNMDQ9H2S6 317 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 DCTPP1Q9H773 170 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 MKNK2Q9HBH9 465 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 NIP7Q9Y221 180 aaKnown RBP eCLIP16.39■□□□□ 0.21
TRIM37-204ENST00000577554 CDKL5O76039 1030 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 POLR3DP05423 398 aaPredicted RBP16.39■□□□□ 0.21
TRIM37-204ENST00000577554 PDILTQ8N807 584 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 LIMCH1Q9UPQ0 1083 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 SAMD9LQ8IVG5 1584 aa16.39■□□□□ 0.21
TRIM37-204ENST00000577554 SSFA2P28290 1259 aa16.38■□□□□ 0.21
TRIM37-204ENST00000577554 HELBQ8NG08 1087 aaPredicted RBP16.38■□□□□ 0.21
TRIM37-204ENST00000577554 DDX21Q9NR30 783 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRIM37-204ENST00000577554 ARHGEF5Q12774 1597 aa16.38■□□□□ 0.21
TRIM37-204ENST00000577554 ZBTB7BO15156 539 aaPredicted RBP16.38■□□□□ 0.21
TRIM37-204ENST00000577554 LMTK3Q96Q04 1460 aa16.38■□□□□ 0.21
TRIM37-204ENST00000577554 SOGA3Q5TF21 947 aa16.38■□□□□ 0.21
TRIM37-204ENST00000577554 RAB11FIP4Q86YS3 637 aa16.38■□□□□ 0.21
TRIM37-204ENST00000577554 TXLNAP40222 546 aa16.37■□□□□ 0.21
TRIM37-204ENST00000577554 DZIP3Q86Y13 1208 aaKnown RBP16.37■□□□□ 0.21
TRIM37-204ENST00000577554 BRPF1P55201 1214 aaPredicted RBP16.37■□□□□ 0.21
TRIM37-204ENST00000577554 ATP2B3Q16720 1220 aa16.37■□□□□ 0.21
TRIM37-204ENST00000577554 SMC5Q8IY18 1101 aa16.37■□□□□ 0.21
TRIM37-204ENST00000577554 GDPD2Q9HCC8 539 aa16.37■□□□□ 0.21
TRIM37-204ENST00000577554 ZFYVE16Q7Z3T8 1539 aa16.37■□□□□ 0.21
TRIM37-204ENST00000577554 SLC4A8Q2Y0W8 1093 aa16.37■□□□□ 0.21
TRIM37-204ENST00000577554 CDK5RAP3Q96JB5 506 aa16.37■□□□□ 0.21
TRIM37-204ENST00000577554 CFAP45Q9UL16 551 aa16.37■□□□□ 0.21
TRIM37-204ENST00000577554 SPC24Q8NBT2 197 aa16.36■□□□□ 0.21
TRIM37-204ENST00000577554 TTC37Q6PGP7 1564 aa16.36■□□□□ 0.21
TRIM37-204ENST00000577554 SMC2O95347 1197 aa16.36■□□□□ 0.21
TRIM37-204ENST00000577554 FAM43AQ8N2R8 423 aa16.36■□□□□ 0.21
TRIM37-204ENST00000577554 IFIT3O14879 490 aaKnown RBP16.35■□□□□ 0.21
TRIM37-204ENST00000577554 A1BGP04217 495 aa16.35■□□□□ 0.21
TRIM37-204ENST00000577554 CCDC192P0DO97 292 aa16.35■□□□□ 0.21
TRIM37-204ENST00000577554 LETM1O95202 739 aaPredicted RBP16.35■□□□□ 0.21
TRIM37-204ENST00000577554 SETDB2Q96T68 719 aa16.35■□□□□ 0.21
TRIM37-204ENST00000577554 LRRC2Q9BYS8 371 aa16.35■□□□□ 0.21
TRIM37-204ENST00000577554 MPHOSPH10O00566 681 aaKnown RBP16.35■□□□□ 0.21
TRIM37-204ENST00000577554 FAM89AQ96GI7 184 aa16.35■□□□□ 0.21
TRIM37-204ENST00000577554 CCDC152Q4G0S7 254 aa16.34■□□□□ 0.21
TRIM37-204ENST00000577554 TFIP11Q9UBB9 837 aaKnown RBP16.34■□□□□ 0.21
TRIM37-204ENST00000577554 KLHDC4Q8TBB5 520 aa16.34■□□□□ 0.21
TRIM37-204ENST00000577554 ZNF496Q96IT1 587 aaPredicted RBP16.34■□□□□ 0.21
TRIM37-204ENST00000577554 NLRP3Q96P20 1036 aa16.34■□□□□ 0.21
TRIM37-204ENST00000577554 SH2B1Q9NRF2 756 aaPredicted RBP16.34■□□□□ 0.21
TRIM37-204ENST00000577554 MYO5CQ9NQX4 1742 aa16.34■□□□□ 0.21
TRIM37-204ENST00000577554 IL15P40933 162 aaPredicted RBP16.33■□□□□ 0.21
TRIM37-204ENST00000577554 C8orf34Q49A92 452 aa16.33■□□□□ 0.21
TRIM37-204ENST00000577554 CCDC144CPQ8IYA2 1237 aa16.33■□□□□ 0.21
TRIM37-204ENST00000577554 OTUD7AQ8TE49 926 aaPredicted RBP16.33■□□□□ 0.21
TRIM37-204ENST00000577554 ZHX3Q9H4I2 956 aa16.33■□□□□ 0.21
TRIM37-204ENST00000577554 IQCA1Q86XH1 822 aa16.33■□□□□ 0.21
TRIM37-204ENST00000577554 SMARCC1Q92922 1105 aaPredicted RBP16.33■□□□□ 0.21
TRIM37-204ENST00000577554 TNPO1Q92973 898 aaKnown RBP16.33■□□□□ 0.21
TRIM37-204ENST00000577554 TMOD2Q9NZR1 351 aa16.33■□□□□ 0.21
TRIM37-204ENST00000577554 MAGI2Q86UL8 1455 aa16.33■□□□□ 0.2
TRIM37-204ENST00000577554 SEC24BO95487 1268 aa16.33■□□□□ 0.2
TRIM37-204ENST00000577554 ZNF622Q969S3 477 aaKnown RBP eCLIP16.33■□□□□ 0.24e-7■■■□□ 18.4
TRIM37-204ENST00000577554 SYCE3A1L190 88 aa16.33■□□□□ 0.2
TRIM37-204ENST00000577554 GOLGA8BA8MQT2 603 aa16.33■□□□□ 0.2
TRIM37-204ENST00000577554 CAMK4Q16566 473 aa16.33■□□□□ 0.2
TRIM37-204ENST00000577554 CRACR2BQ8N4Y2 399 aaPredicted RBP16.33■□□□□ 0.2
TRIM37-204ENST00000577554 C8orf76Q96K31 380 aa16.33■□□□□ 0.2
TRIM37-204ENST00000577554 KRT18P05783 430 aaKnown RBP16.32■□□□□ 0.2
TRIM37-204ENST00000577554 ANKRD18AQ8IVF6 992 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 NEK1Q96PY6 1258 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 ESYT1Q9BSJ8 1104 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 BICC1Q9H694 974 aaKnown RBP16.32■□□□□ 0.2
TRIM37-204ENST00000577554 PLEKHM2Q8IWE5 1019 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 NECAB1Q8N987 351 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 NUP62CLQ9H1M0 184 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 PCDH11XQ9BZA7 1347 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 PCDH11YQ9BZA8 1340 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 SSBP05455 408 aaKnown RBP eCLIP16.32■□□□□ 0.2
TRIM37-204ENST00000577554 HMGB1P09429 215 aaKnown RBP16.32■□□□□ 0.2
TRIM37-204ENST00000577554 MICU3Q86XE3 530 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 WWC3Q9ULE0 1092 aa16.32■□□□□ 0.2
TRIM37-204ENST00000577554 NOL7Q9UMY1 257 aaKnown RBP16.32■□□□□ 0.2
TRIM37-204ENST00000577554 IRS4O14654 1257 aaPredicted RBP16.31■□□□□ 0.2
TRIM37-204ENST00000577554 KCNQ3O43525 872 aa16.31■□□□□ 0.2
TRIM37-204ENST00000577554 ZNF444Q8N0Y2 327 aaPredicted RBP16.31■□□□□ 0.2
TRIM37-204ENST00000577554 IL17REQ8NFR9 667 aa16.31■□□□□ 0.2
TRIM37-204ENST00000577554 BRF1Q92994 677 aa16.31■□□□□ 0.2
TRIM37-204ENST00000577554 GRPEL1Q9HAV7 217 aa16.31■□□□□ 0.2
TRIM37-204ENST00000577554 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
TRIM37-204ENST00000577554 MLH3Q9UHC1 1453 aa16.31■□□□□ 0.2
TRIM37-204ENST00000577554 SBNO2Q9Y2G9 1366 aa16.31■□□□□ 0.2
TRIM37-204ENST00000577554 OFD1O75665 1012 aa16.31■□□□□ 0.2
TRIM37-204ENST00000577554 PRIM1P49642 420 aaKnown RBP16.31■□□□□ 0.2
TRIM37-204ENST00000577554 CTCFLQ8NI51 663 aaPredicted RBP16.31■□□□□ 0.2
TRIM37-204ENST00000577554 PLA2R1Q13018 1463 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms