RNA–Protein interactions for RNA: ENST00000577396.5

SUPT4H1-202, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2 BASIC

Gene SUPT4H1, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-202ENST00000577396 LRP5O75197 1615 aa25.76■■□□□ 1.71
SUPT4H1-202ENST00000577396 MAP3K15Q6ZN16 1313 aa25.76■■□□□ 1.71
SUPT4H1-202ENST00000577396 ERVV-1B6SEH8 477 aa25.76■■□□□ 1.71
SUPT4H1-202ENST00000577396 MMP10P09238 476 aa25.76■■□□□ 1.71
SUPT4H1-202ENST00000577396 POLD1P28340 1107 aa25.76■■□□□ 1.71
SUPT4H1-202ENST00000577396 HLFQ16534 295 aa25.76■■□□□ 1.71
SUPT4H1-202ENST00000577396 TCERG1O14776 1098 aaKnown RBP25.75■■□□□ 1.71
SUPT4H1-202ENST00000577396 PHAXQ9H814 394 aaKnown RBP25.75■■□□□ 1.71
SUPT4H1-202ENST00000577396 NFIXQ14938 502 aa25.74■■□□□ 1.71
SUPT4H1-202ENST00000577396 AIMP1Q12904 312 aaKnown RBP25.74■■□□□ 1.71
SUPT4H1-202ENST00000577396 TBC1D9BQ66K14 1250 aa25.74■■□□□ 1.71
SUPT4H1-202ENST00000577396 SLC4A2P04920 1241 aa25.73■■□□□ 1.71
SUPT4H1-202ENST00000577396 DDR1Q08345 913 aa25.73■■□□□ 1.71
SUPT4H1-202ENST00000577396 KIF6Q6ZMV9 814 aa25.73■■□□□ 1.71
SUPT4H1-202ENST00000577396 SCN7AQ01118 1682 aa25.72■■□□□ 1.71
SUPT4H1-202ENST00000577396 STK31Q9BXU1 1019 aa25.72■■□□□ 1.71
SUPT4H1-202ENST00000577396 ZBTB3Q9H5J0 574 aa25.72■■□□□ 1.71
SUPT4H1-202ENST00000577396 BCORQ6W2J9 1755 aa25.71■■□□□ 1.71
SUPT4H1-202ENST00000577396 POLRMTO00411 1230 aaKnown RBP25.7■■□□□ 1.71
SUPT4H1-202ENST00000577396 GIGYF2Q6Y7W6 1299 aaKnown RBP25.7■■□□□ 1.71
SUPT4H1-202ENST00000577396 ZNF652Q9Y2D9 606 aa25.7■■□□□ 1.71
SUPT4H1-202ENST00000577396 ANKRD13DQ6ZTN6 518 aa25.7■■□□□ 1.7
SUPT4H1-202ENST00000577396 G2E3Q7L622 706 aa25.7■■□□□ 1.7
SUPT4H1-202ENST00000577396 PLBD2Q8NHP8 589 aa25.69■■□□□ 1.7
SUPT4H1-202ENST00000577396 CT47B1P0C2W7 299 aaPredicted RBP25.68■■□□□ 1.7
SUPT4H1-202ENST00000577396 BICDL1Q6ZP65 573 aa25.68■■□□□ 1.7
SUPT4H1-202ENST00000577396 ZNF428Q96B54 188 aa25.68■■□□□ 1.7
SUPT4H1-202ENST00000577396 PARP3Q9Y6F1 533 aa25.68■■□□□ 1.7
SUPT4H1-202ENST00000577396 SETDB2Q96T68 719 aa25.66■■□□□ 1.7
SUPT4H1-202ENST00000577396 PPP1R1BQ9UD71 204 aaPredicted RBP25.66■■□□□ 1.7
SUPT4H1-202ENST00000577396 NUP98P52948 1817 aa25.66■■□□□ 1.7
SUPT4H1-202ENST00000577396 ZNF34Q8IZ26 560 aa25.66■■□□□ 1.7
SUPT4H1-202ENST00000577396 SERPINB2P05120 415 aa25.65■■□□□ 1.7
SUPT4H1-202ENST00000577396 NIP7Q9Y221 180 aaKnown RBP eCLIP25.65■■□□□ 1.7
SUPT4H1-202ENST00000577396 CACNA1FO60840 1977 aa25.65■■□□□ 1.7
SUPT4H1-202ENST00000577396 ATP10DQ9P241 1426 aa25.64■■□□□ 1.7
SUPT4H1-202ENST00000577396 SSH1Q8WYL5 1049 aa25.64■■□□□ 1.7
SUPT4H1-202ENST00000577396 FLIIQ13045 1269 aa25.63■■□□□ 1.69
SUPT4H1-202ENST00000577396 TCIRG1Q13488 830 aa25.63■■□□□ 1.69
SUPT4H1-202ENST00000577396 MRPL50Q8N5N7 158 aaKnown RBP25.63■■□□□ 1.69
SUPT4H1-202ENST00000577396 FHDC1Q9C0D6 1143 aaPredicted RBP25.63■■□□□ 1.69
SUPT4H1-202ENST00000577396 ALDH1L2Q3SY69 923 aa25.63■■□□□ 1.69
SUPT4H1-202ENST00000577396 CARMIL3Q8ND23 1372 aa25.62■■□□□ 1.69
SUPT4H1-202ENST00000577396 KSR2Q6VAB6 950 aa25.62■■□□□ 1.69
SUPT4H1-202ENST00000577396 RIC3Q7Z5B4 369 aa25.62■■□□□ 1.69
SUPT4H1-202ENST00000577396 PI4KAP2A4QPH2 592 aa25.61■■□□□ 1.69
SUPT4H1-202ENST00000577396 DDX58O95786 925 aaKnown RBP25.61■■□□□ 1.69
SUPT4H1-202ENST00000577396 UBN2Q6ZU65 1347 aa25.61■■□□□ 1.69
SUPT4H1-202ENST00000577396 PI4KAP1Q8N8J0 262 aa25.61■■□□□ 1.69
SUPT4H1-202ENST00000577396 SYT17Q9BSW7 474 aa25.61■■□□□ 1.69
SUPT4H1-202ENST00000577396 CD2APQ9Y5K6 639 aa25.61■■□□□ 1.69
SUPT4H1-202ENST00000577396 GPTP24298 496 aa25.6■■□□□ 1.69
SUPT4H1-202ENST00000577396 HSP90AB3PQ58FF7 597 aa25.6■■□□□ 1.69
SUPT4H1-202ENST00000577396 NRXN2Q9P2S2 1712 aa25.6■■□□□ 1.69
SUPT4H1-202ENST00000577396 ADCY9O60503 1353 aa25.6■■□□□ 1.69
SUPT4H1-202ENST00000577396 AFDNP55196 1824 aaKnown RBP25.59■■□□□ 1.69
SUPT4H1-202ENST00000577396 RARSP54136 660 aaKnown RBP25.59■■□□□ 1.69
SUPT4H1-202ENST00000577396 ISCA1Q9BUE6 129 aa25.59■■□□□ 1.69
SUPT4H1-202ENST00000577396 TRIM28Q13263 835 aaKnown RBP25.58■■□□□ 1.69
SUPT4H1-202ENST00000577396 SUSD4Q5VX71 490 aa25.58■■□□□ 1.69
SUPT4H1-202ENST00000577396 PRR5LQ6MZQ0 368 aa25.58■■□□□ 1.69
SUPT4H1-202ENST00000577396 BCL2L13Q9BXK5 485 aa25.58■■□□□ 1.69
SUPT4H1-202ENST00000577396 MAP3K2Q9Y2U5 619 aa25.58■■□□□ 1.69
SUPT4H1-202ENST00000577396 GOLGB1Q14789 3259 aaKnown RBP25.58■■□□□ 1.68
SUPT4H1-202ENST00000577396 FKBP5Q13451 457 aaPredicted RBP25.57■■□□□ 1.68
SUPT4H1-202ENST00000577396 PARP10Q53GL7 1025 aa25.57■■□□□ 1.68
SUPT4H1-202ENST00000577396 NLRP10Q86W26 655 aa25.57■■□□□ 1.68
SUPT4H1-202ENST00000577396 YTHDC1Q96MU7 727 aaKnown RBP25.57■■□□□ 1.68
SUPT4H1-202ENST00000577396 METTL22Q9BUU2 404 aaPredicted RBP25.57■■□□□ 1.68
SUPT4H1-202ENST00000577396 C10orf71Q711Q0 1435 aa25.57■■□□□ 1.68
SUPT4H1-202ENST00000577396 BRPF1P55201 1214 aaPredicted RBP25.56■■□□□ 1.68
SUPT4H1-202ENST00000577396 TPTE2Q6XPS3 522 aa25.56■■□□□ 1.68
SUPT4H1-202ENST00000577396 NBPF5PQ86XG9 351 aaPredicted RBP25.56■■□□□ 1.68
SUPT4H1-202ENST00000577396 ATP5J2-PTCD1G3V325 749 aa25.55■■□□□ 1.68
SUPT4H1-202ENST00000577396 KLHL34Q8N239 644 aa25.55■■□□□ 1.68
SUPT4H1-202ENST00000577396 SMC4Q9NTJ3 1288 aa25.55■■□□□ 1.68
SUPT4H1-202ENST00000577396 ARFGEF2Q9Y6D5 1785 aa25.54■■□□□ 1.68
SUPT4H1-202ENST00000577396 FAM177BA6PVY3 158 aa25.54■■□□□ 1.68
SUPT4H1-202ENST00000577396 CCDC24Q8N4L8 307 aa25.54■■□□□ 1.68
SUPT4H1-202ENST00000577396 CNBD1Q8NA66 436 aa25.54■■□□□ 1.68
SUPT4H1-202ENST00000577396 NLGN2Q8NFZ4 835 aa25.54■■□□□ 1.68
SUPT4H1-202ENST00000577396 MYD88Q99836 296 aa25.54■■□□□ 1.68
SUPT4H1-202ENST00000577396 KIF13BQ9NQT8 1826 aa25.53■■□□□ 1.68
SUPT4H1-202ENST00000577396 NTSR2O95665 410 aa25.53■■□□□ 1.68
SUPT4H1-202ENST00000577396 IGKV5-2P06315 115 aa25.52■■□□□ 1.68
SUPT4H1-202ENST00000577396 PPP1R42Q7Z4L9 355 aa25.52■■□□□ 1.68
SUPT4H1-202ENST00000577396 DNAAF4Q8WXU2 420 aa25.52■■□□□ 1.68
SUPT4H1-202ENST00000577396 NYXQ9GZU5 481 aa25.52■■□□□ 1.68
SUPT4H1-202ENST00000577396 TGFB2P61812 414 aa25.52■■□□□ 1.68
SUPT4H1-202ENST00000577396 BRIP1Q9BX63 1249 aa25.52■■□□□ 1.68
SUPT4H1-202ENST00000577396 IBTKQ9P2D0 1353 aaPredicted RBP25.52■■□□□ 1.68
SUPT4H1-202ENST00000577396 ANKRD36CQ5JPF3 1778 aa25.51■■□□□ 1.67
SUPT4H1-202ENST00000577396 F6X3S4 739 aa25.51■■□□□ 1.67
SUPT4H1-202ENST00000577396 NUTM1Q86Y26 1132 aa25.51■■□□□ 1.67
SUPT4H1-202ENST00000577396 UTP14AQ9BVJ6 771 aaKnown RBP25.51■■□□□ 1.67
SUPT4H1-202ENST00000577396 PTPRCP08575 1304 aa25.5■■□□□ 1.67
SUPT4H1-202ENST00000577396 BCAR3O75815 825 aa25.49■■□□□ 1.67
SUPT4H1-202ENST00000577396 ERFEQ4G0M1 354 aa25.49■■□□□ 1.67
SUPT4H1-202ENST00000577396 CCDC191Q8NCU4 936 aa25.49■■□□□ 1.67
SUPT4H1-202ENST00000577396 UTRNP46939 3433 aa25.49■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms