RNA–Protein interactions for RNA: ENST00000576348.1

ERCC4-208, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-208ENST00000576348 DZIP3Q86Y13 1208 aaKnown RBP20.83■□□□□ 0.93
ERCC4-208ENST00000576348 CCDC125Q86Z20 511 aa20.83■□□□□ 0.93
ERCC4-208ENST00000576348 SRCIN1Q9C0H9 1055 aa20.83■□□□□ 0.93
ERCC4-208ENST00000576348 ZNF831Q5JPB2 1677 aa20.83■□□□□ 0.92
ERCC4-208ENST00000576348 CICQ96RK0 1608 aaPredicted RBP20.82■□□□□ 0.92
ERCC4-208ENST00000576348 RPS6KA4O75676 772 aa20.82■□□□□ 0.92
ERCC4-208ENST00000576348 EN1Q05925 392 aaPredicted RBP20.81■□□□□ 0.92
ERCC4-208ENST00000576348 MYD88Q99836 296 aa20.81■□□□□ 0.92
ERCC4-208ENST00000576348 METTL22Q9BUU2 404 aaPredicted RBP20.81■□□□□ 0.92
ERCC4-208ENST00000576348 TBC1D2BQ9UPU7 963 aa20.81■□□□□ 0.92
ERCC4-208ENST00000576348 COL15A1P39059 1388 aa20.81■□□□□ 0.92
ERCC4-208ENST00000576348 PXDNLA1KZ92 1463 aa20.81■□□□□ 0.92
ERCC4-208ENST00000576348 MAP3K15Q6ZN16 1313 aa20.8■□□□□ 0.92
ERCC4-208ENST00000576348 LY75O60449 1722 aa20.79■□□□□ 0.92
ERCC4-208ENST00000576348 ALDH1L1O75891 902 aa20.79■□□□□ 0.92
ERCC4-208ENST00000576348 AAMPQ13685 434 aa20.79■□□□□ 0.92
ERCC4-208ENST00000576348 PROM2Q8N271 834 aa20.79■□□□□ 0.92
ERCC4-208ENST00000576348 LINS1Q8NG48 757 aa20.79■□□□□ 0.92
ERCC4-208ENST00000576348 PHF14O94880 888 aa20.78■□□□□ 0.92
ERCC4-208ENST00000576348 EZH2Q15910 746 aaKnown RBP20.78■□□□□ 0.92
ERCC4-208ENST00000576348 HSP90AB3PQ58FF7 597 aa20.78■□□□□ 0.92
ERCC4-208ENST00000576348 TRAPPC3LQ5T215 181 aa20.78■□□□□ 0.92
ERCC4-208ENST00000576348 BEND3Q5T5X7 828 aa20.78■□□□□ 0.92
ERCC4-208ENST00000576348 ERVV-1B6SEH8 477 aa20.77■□□□□ 0.92
ERCC4-208ENST00000576348 ZPR1O75312 459 aa20.77■□□□□ 0.92
ERCC4-208ENST00000576348 CAMKK2Q96RR4 588 aa20.77■□□□□ 0.92
ERCC4-208ENST00000576348 ZNF652Q9Y2D9 606 aa20.77■□□□□ 0.92
ERCC4-208ENST00000576348 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
ERCC4-208ENST00000576348 TNS1Q9HBL0 1735 aaKnown RBP20.76■□□□□ 0.91
ERCC4-208ENST00000576348 CACNA1FO60840 1977 aa20.76■□□□□ 0.91
ERCC4-208ENST00000576348 ADRA2BP18089 450 aa20.76■□□□□ 0.91
ERCC4-208ENST00000576348 RFC4P35249 363 aa20.76■□□□□ 0.91
ERCC4-208ENST00000576348 C9orf78Q9NZ63 289 aaPredicted RBP20.76■□□□□ 0.91
ERCC4-208ENST00000576348 TFCP2L1Q9NZI6 479 aa20.76■□□□□ 0.91
ERCC4-208ENST00000576348 ATP5J2-PTCD1G3V325 749 aa20.75■□□□□ 0.91
ERCC4-208ENST00000576348 GNAI3P08754 354 aa20.75■□□□□ 0.91
ERCC4-208ENST00000576348 GIGYF2Q6Y7W6 1299 aaKnown RBP20.75■□□□□ 0.91
ERCC4-208ENST00000576348 DEFB132Q7Z7B7 95 aa20.75■□□□□ 0.91
ERCC4-208ENST00000576348 PPP4R2Q9NY27 417 aa20.75■□□□□ 0.91
ERCC4-208ENST00000576348 STK32BQ9NY57 414 aa20.75■□□□□ 0.91
ERCC4-208ENST00000576348 C4BP0C0L5 1744 aa20.75■□□□□ 0.91
ERCC4-208ENST00000576348 COL5A3P25940 1745 aaPredicted RBP20.75■□□□□ 0.91
ERCC4-208ENST00000576348 SSFA2P28290 1259 aa20.74■□□□□ 0.91
ERCC4-208ENST00000576348 TCIRG1Q13488 830 aa20.74■□□□□ 0.91
ERCC4-208ENST00000576348 CWF19L2Q2TBE0 894 aaKnown RBP20.74■□□□□ 0.91
ERCC4-208ENST00000576348 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.73■□□□□ 0.91
ERCC4-208ENST00000576348 NEURL1BA8MQ27 555 aa20.73■□□□□ 0.91
ERCC4-208ENST00000576348 ZBTB7BO15156 539 aaPredicted RBP20.73■□□□□ 0.91
ERCC4-208ENST00000576348 CAMTA2O94983 1202 aa20.73■□□□□ 0.91
ERCC4-208ENST00000576348 CWC25Q9NXE8 425 aaPredicted RBP20.73■□□□□ 0.91
ERCC4-208ENST00000576348 HDAC5Q9UQL6 1122 aa20.73■□□□□ 0.91
ERCC4-208ENST00000576348 RREB1Q92766 1687 aa20.73■□□□□ 0.91
ERCC4-208ENST00000576348 MSH5O43196 834 aa20.72■□□□□ 0.91
ERCC4-208ENST00000576348 UBTFL1P0CB47 393 aaPredicted RBP20.72■□□□□ 0.91
ERCC4-208ENST00000576348 HLFQ16534 295 aa20.72■□□□□ 0.91
ERCC4-208ENST00000576348 SMIM5Q71RC9 77 aa20.72■□□□□ 0.91
ERCC4-208ENST00000576348 FLAD1Q8NFF5 587 aa20.72■□□□□ 0.91
ERCC4-208ENST00000576348 ARHGEF1Q92888 912 aaKnown RBP20.72■□□□□ 0.91
ERCC4-208ENST00000576348 CCDC136Q96JN2 1154 aa20.72■□□□□ 0.91
ERCC4-208ENST00000576348 MEIS3Q99687 375 aa20.72■□□□□ 0.91
ERCC4-208ENST00000576348 NARFQ9UHQ1 456 aa20.72■□□□□ 0.91
ERCC4-208ENST00000576348 IGKV5-2P06315 115 aa20.71■□□□□ 0.91
ERCC4-208ENST00000576348 GPTP24298 496 aa20.71■□□□□ 0.91
ERCC4-208ENST00000576348 ZBTB40Q9NUA8 1239 aa20.71■□□□□ 0.91
ERCC4-208ENST00000576348 GNAI2P04899 355 aa20.7■□□□□ 0.9
ERCC4-208ENST00000576348 GCKRQ14397 625 aa20.7■□□□□ 0.9
ERCC4-208ENST00000576348 ZNF827Q17R98 1081 aa20.7■□□□□ 0.9
ERCC4-208ENST00000576348 USPL1Q5W0Q7 1092 aa20.7■□□□□ 0.9
ERCC4-208ENST00000576348 CCDC191Q8NCU4 936 aa20.7■□□□□ 0.9
ERCC4-208ENST00000576348 AKT1S1Q96B36 256 aa20.7■□□□□ 0.9
ERCC4-208ENST00000576348 RGPD3A6NKT7 1758 aaPredicted RBP20.69■□□□□ 0.9
ERCC4-208ENST00000576348 RGPD4Q7Z3J3 1758 aa20.69■□□□□ 0.9
ERCC4-208ENST00000576348 GRM8O00222 908 aa20.69■□□□□ 0.9
ERCC4-208ENST00000576348 RGL2O15211 777 aa20.69■□□□□ 0.9
ERCC4-208ENST00000576348 CLEC4GQ6UXB4 293 aa20.69■□□□□ 0.9
ERCC4-208ENST00000576348 ISCA1Q9BUE6 129 aa20.69■□□□□ 0.9
ERCC4-208ENST00000576348 C1orf115Q9H7X2 142 aa20.69■□□□□ 0.9
ERCC4-208ENST00000576348 SRP68Q9UHB9 627 aaKnown RBP20.69■□□□□ 0.9
ERCC4-208ENST00000576348 USP44Q9H0E7 712 aa20.68■□□□□ 0.9
ERCC4-208ENST00000576348 NIP7Q9Y221 180 aaKnown RBP eCLIP20.68■□□□□ 0.9
ERCC4-208ENST00000576348 TRIM28Q13263 835 aaKnown RBP20.67■□□□□ 0.9
ERCC4-208ENST00000576348 PARP10Q53GL7 1025 aa20.67■□□□□ 0.9
ERCC4-208ENST00000576348 AMIGO3Q86WK7 504 aa20.67■□□□□ 0.9
ERCC4-208ENST00000576348 UPF1Q92900 1129 aaKnown RBP eCLIP20.67■□□□□ 0.9
ERCC4-208ENST00000576348 USP42Q9H9J4 1324 aaKnown RBP20.67■□□□□ 0.9
ERCC4-208ENST00000576348 SLC15A2Q16348 729 aa20.66■□□□□ 0.9
ERCC4-208ENST00000576348 BICDL1Q6ZP65 573 aa20.66■□□□□ 0.9
ERCC4-208ENST00000576348 TAF1LQ8IZX4 1826 aa20.66■□□□□ 0.9
ERCC4-208ENST00000576348 MYH14Q7Z406 1995 aaKnown RBP20.66■□□□□ 0.9
ERCC4-208ENST00000576348 IBTKQ9P2D0 1353 aaPredicted RBP20.65■□□□□ 0.9
ERCC4-208ENST00000576348 B4GALNT3Q6L9W6 998 aa20.65■□□□□ 0.9
ERCC4-208ENST00000576348 UBE3BQ7Z3V4 1068 aa20.65■□□□□ 0.9
ERCC4-208ENST00000576348 NLRP10Q86W26 655 aa20.65■□□□□ 0.9
ERCC4-208ENST00000576348 ZNF34Q8IZ26 560 aa20.65■□□□□ 0.9
ERCC4-208ENST00000576348 LRRFIP2Q9Y608 721 aaKnown RBP20.65■□□□□ 0.9
ERCC4-208ENST00000576348 ARFGEF2Q9Y6D5 1785 aa20.64■□□□□ 0.9
ERCC4-208ENST00000576348 EP400Q96L91 3159 aa20.64■□□□□ 0.89
ERCC4-208ENST00000576348 NBPF7P0C2Y1 421 aaPredicted RBP20.64■□□□□ 0.89
ERCC4-208ENST00000576348 PPP1R42Q7Z4L9 355 aa20.64■□□□□ 0.89
ERCC4-208ENST00000576348 SETDB2Q96T68 719 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms