RNA–Protein interactions for RNA: ENST00000575909.1

TOM1L1-222, Transcript of target of myb1 like 1 membrane trafficking protein, human

TSL 3

Gene TOM1L1, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TOM1L1-222	ENST00000575909	MZF1	P28698	734 aa	Predicted RBP	10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	TXLNA	P40222	546 aa		10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	ZAP70	P43403	619 aa		10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	PLA2G4A	P47712	749 aa		10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	FGD1	P98174	961 aa		10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	PLCB3	Q01970	1234 aa		10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	DSC3	Q14574	896 aa		10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	ATCAY	Q86WG3	371 aa		10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	POLM	Q9NP87	494 aa	Predicted RBP	10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	ZDHHC3	Q9NYG2	299 aa		10.27	□□□□□ -0.77
TOM1L1-222	ENST00000575909	IGHA2	P01877	340 aa		10.26	□□□□□ -0.77
TOM1L1-222	ENST00000575909	TAGLN	Q01995	201 aa	Known RBP	10.26	□□□□□ -0.77
TOM1L1-222	ENST00000575909	ALKBH8	Q96BT7	664 aa	Known RBP	10.26	□□□□□ -0.77
TOM1L1-222	ENST00000575909	IGSF5	Q9NSI5	407 aa		10.26	□□□□□ -0.77
TOM1L1-222	ENST00000575909	POLI	Q9UNA4	740 aa		10.26	□□□□□ -0.77
TOM1L1-222	ENST00000575909	GPC6	Q9Y625	555 aa	Predicted RBP	10.26	□□□□□ -0.77
TOM1L1-222	ENST00000575909	DNM1	Q05193	864 aa	Known RBP	10.25	□□□□□ -0.77
TOM1L1-222	ENST00000575909	WDR44	Q5JSH3	913 aa		10.25	□□□□□ -0.77
TOM1L1-222	ENST00000575909	GJD3	Q8N144	294 aa		10.25	□□□□□ -0.77
TOM1L1-222	ENST00000575909	RHPN1	Q8TCX5	695 aa		10.25	□□□□□ -0.77
TOM1L1-222	ENST00000575909	AIDA	Q96BJ3	306 aa		10.25	□□□□□ -0.77
TOM1L1-222	ENST00000575909	FAM13B	Q9NYF5	915 aa		10.25	□□□□□ -0.77
TOM1L1-222	ENST00000575909	PCSK2	P16519	638 aa		10.24	□□□□□ -0.77
TOM1L1-222	ENST00000575909	TAT	P17735	454 aa	Predicted RBP	10.24	□□□□□ -0.77
TOM1L1-222	ENST00000575909	CTSO	P43234	321 aa	Predicted RBP	10.24	□□□□□ -0.77
TOM1L1-222	ENST00000575909	EHHADH	Q08426	723 aa		10.24	□□□□□ -0.77
TOM1L1-222	ENST00000575909	TREML1	Q86YW5	311 aa		10.24	□□□□□ -0.77
TOM1L1-222	ENST00000575909	C7orf43	Q8WVR3	580 aa		10.24	□□□□□ -0.77
TOM1L1-222	ENST00000575909	EDEM1	Q92611	657 aa		10.24	□□□□□ -0.77
TOM1L1-222	ENST00000575909	GPR182	O15218	404 aa		10.23	□□□□□ -0.77
TOM1L1-222	ENST00000575909	PDGFA	P04085	211 aa		10.23	□□□□□ -0.77
TOM1L1-222	ENST00000575909	TGFBR3L	H3BV60	316 aa		10.22	□□□□□ -0.77
TOM1L1-222	ENST00000575909	RPLP1	P05386	114 aa	Known RBP	10.22	□□□□□ -0.77
TOM1L1-222	ENST00000575909	BMP2	P12643	396 aa		10.22	□□□□□ -0.77
TOM1L1-222	ENST00000575909	NBPF10	Q6P3W6	841 aa	Known RBP	10.22	□□□□□ -0.77
TOM1L1-222	ENST00000575909	BCS1L	Q9Y276	419 aa		10.22	□□□□□ -0.77
TOM1L1-222	ENST00000575909	MAPK8	P45983	427 aa		10.21	□□□□□ -0.77
TOM1L1-222	ENST00000575909	PHKA2	P46019	1235 aa		10.21	□□□□□ -0.77
TOM1L1-222	ENST00000575909	IER5	Q5VY09	327 aa		10.21	□□□□□ -0.77
TOM1L1-222	ENST00000575909	RNF217	Q8TC41	542 aa		10.21	□□□□□ -0.77
TOM1L1-222	ENST00000575909	ANKIB1	Q9P2G1	1089 aa		10.21	□□□□□ -0.77
TOM1L1-222	ENST00000575909	MICAL2	O94851	1124 aa		10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	LDHB	P07195	334 aa	Known RBP	10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	ITGAE	P38570	1179 aa		10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	POU4F2	Q12837	409 aa		10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	MRPL14	Q6P1L8	145 aa	Known RBP	10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	LYSMD3	Q7Z3D4	306 aa		10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	TTC16	Q8NEE8	873 aa		10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	SUSD3	Q96L08	255 aa		10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	NIF3L1	Q9GZT8	377 aa		10.2	□□□□□ -0.78
TOM1L1-222	ENST00000575909	PRPF40A	O75400	957 aa	Known RBP	10.19	□□□□□ -0.78
TOM1L1-222	ENST00000575909	RGS20	O76081	388 aa		10.19	□□□□□ -0.78
TOM1L1-222	ENST00000575909	TCF3	P15923	654 aa		10.19	□□□□□ -0.78
TOM1L1-222	ENST00000575909	ATP2B2	Q01814	1243 aa		10.19	□□□□□ -0.78
TOM1L1-222	ENST00000575909	BICDL1	Q6ZP65	573 aa		10.19	□□□□□ -0.78
TOM1L1-222	ENST00000575909	PRICKLE2	Q7Z3G6	844 aa		10.19	□□□□□ -0.78
TOM1L1-222	ENST00000575909	GPR152	Q8TDT2	470 aa		10.19	□□□□□ -0.78
TOM1L1-222	ENST00000575909	PDZRN3	Q9UPQ7	1066 aa		10.19	□□□□□ -0.78
TOM1L1-222	ENST00000575909	NEFL	P07196	543 aa		10.18	□□□□□ -0.78
TOM1L1-222	ENST00000575909	C6orf118	Q5T5N4	469 aa		10.18	□□□□□ -0.78
TOM1L1-222	ENST00000575909	PIK3R5	Q8WYR1	880 aa		10.18	□□□□□ -0.78
TOM1L1-222	ENST00000575909	NUDT16	Q96DE0	195 aa	Known RBP	10.18	□□□□□ -0.78
TOM1L1-222	ENST00000575909	DMGDH	Q9UI17	866 aa	Known RBP	10.18	□□□□□ -0.78
TOM1L1-222	ENST00000575909		A0A1B0GTH6	734 aa		10.17	□□□□□ -0.78
TOM1L1-222	ENST00000575909	AVP	P01185	164 aa		10.17	□□□□□ -0.78
TOM1L1-222	ENST00000575909	SCARF1	Q14162	830 aa		10.17	□□□□□ -0.78
TOM1L1-222	ENST00000575909	NEUROD4	Q9HD90	331 aa		10.17	□□□□□ -0.78
TOM1L1-222	ENST00000575909	TTLL8	A6PVC2	850 aa		10.16	□□□□□ -0.78
TOM1L1-222	ENST00000575909	OPLAH	O14841	1288 aa		10.16	□□□□□ -0.78
TOM1L1-222	ENST00000575909	ATP4A	P20648	1035 aa		10.16	□□□□□ -0.78
TOM1L1-222	ENST00000575909	XPC	Q01831	940 aa	Predicted RBP	10.16	□□□□□ -0.78
TOM1L1-222	ENST00000575909	ENOX2	Q16206	610 aa	Known RBP	10.16	□□□□□ -0.78
TOM1L1-222	ENST00000575909	ALG1L	Q6GMV1	187 aa		10.16	□□□□□ -0.78
TOM1L1-222	ENST00000575909	ZNF280C	Q8ND82	737 aa		10.16	□□□□□ -0.78
TOM1L1-222	ENST00000575909	TIMMDC1	Q9NPL8	285 aa		10.16	□□□□□ -0.78
TOM1L1-222	ENST00000575909	RECK	O95980	971 aa		10.15	□□□□□ -0.78
TOM1L1-222	ENST00000575909	IDH3A	P50213	366 aa		10.15	□□□□□ -0.78
TOM1L1-222	ENST00000575909	MRPL58	Q14197	206 aa	Known RBP	10.15	□□□□□ -0.78
TOM1L1-222	ENST00000575909	ARSJ	Q5FYB0	599 aa	Predicted RBP	10.15	□□□□□ -0.78
TOM1L1-222	ENST00000575909	PARP2	Q9UGN5	583 aa		10.15	□□□□□ -0.78
TOM1L1-222	ENST00000575909	ARSD	P51689	593 aa		10.14	□□□□□ -0.79
TOM1L1-222	ENST00000575909	C8orf34	Q49A92	452 aa		10.14	□□□□□ -0.79
TOM1L1-222	ENST00000575909	HSH2D	Q96JZ2	352 aa		10.14	□□□□□ -0.79
TOM1L1-222	ENST00000575909	ZIC5	Q96T25	663 aa		10.14	□□□□□ -0.79
TOM1L1-222	ENST00000575909	DUSP9	Q99956	384 aa	Known RBP	10.14	□□□□□ -0.79
TOM1L1-222	ENST00000575909	GGNBP2	Q9H3C7	697 aa		10.14	□□□□□ -0.79
TOM1L1-222	ENST00000575909	SOS2	Q07890	1332 aa	Predicted RBP	10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	PNMA6F	A0A0J9YX94	578 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	FAM187A	A6NFU0	413 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	MSX1	P28360	303 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	INPP5B	P32019	993 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	TMC4	Q7Z404	712 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	BTLA	Q7Z6A9	289 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	KLRG1	Q96E93	195 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	CSRNP1	Q96S65	589 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	DNAJC25	Q9H1X3	360 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	MRS2	Q9HD23	443 aa		10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	FNDC3A	Q9Y2H6	1198 aa	Known RBP	10.13	□□□□□ -0.79
TOM1L1-222	ENST00000575909	CTC1	Q2NKJ3	1217 aa		10.12	□□□□□ -0.79
TOM1L1-222	ENST00000575909	TSNAXIP1	Q2TAA8	658 aa		10.12	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms