RNA–Protein interactions for RNA: ENST00000575857.3

SLC12A4-215, Transcript of solute carrier family 12 member 4, human

TSL 3

Gene SLC12A4, Length 588 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SLC12A4-215	ENST00000575857	USPL1	Q5W0Q7	1092 aa		14.01	□□□□□ -0.17
SLC12A4-215	ENST00000575857	NECTIN2	Q92692	538 aa		14.01	□□□□□ -0.17
SLC12A4-215	ENST00000575857	DDX21	Q9NR30	783 aa	Known RBP eCLIP	14.01	□□□□□ -0.17
SLC12A4-215	ENST00000575857	CHPF2	Q9P2E5	772 aa		14.01	□□□□□ -0.17
SLC12A4-215	ENST00000575857	TBC1D2B	Q9UPU7	963 aa		14.01	□□□□□ -0.17
SLC12A4-215	ENST00000575857	VAMP4	O75379	141 aa		14	□□□□□ -0.17
SLC12A4-215	ENST00000575857	MYL6B	P14649	208 aa		14	□□□□□ -0.17
SLC12A4-215	ENST00000575857	TTLL7	Q6ZT98	887 aa		14	□□□□□ -0.17
SLC12A4-215	ENST00000575857	DZIP3	Q86Y13	1208 aa	Known RBP	14	□□□□□ -0.17
SLC12A4-215	ENST00000575857	NLGN1	Q8N2Q7	840 aa		14	□□□□□ -0.17
SLC12A4-215	ENST00000575857	ZNF330	Q9Y3S2	320 aa	Predicted RBP	14	□□□□□ -0.17
SLC12A4-215	ENST00000575857	ADCY9	O60503	1353 aa		13.99	□□□□□ -0.17
SLC12A4-215	ENST00000575857	ZBED9	Q6R2W3	1325 aa		13.99	□□□□□ -0.17
SLC12A4-215	ENST00000575857	SCN7A	Q01118	1682 aa		13.99	□□□□□ -0.17
SLC12A4-215	ENST00000575857	RGL2	O15211	777 aa		13.99	□□□□□ -0.17
SLC12A4-215	ENST00000575857	ZPR1	O75312	459 aa		13.99	□□□□□ -0.17
SLC12A4-215	ENST00000575857	DBF4	Q9UBU7	674 aa	Predicted RBP	13.99	□□□□□ -0.17
SLC12A4-215	ENST00000575857	TM4SF1	P30408	202 aa		13.98	□□□□□ -0.17
SLC12A4-215	ENST00000575857	MAP3K15	Q6ZN16	1313 aa		13.97	□□□□□ -0.17
SLC12A4-215	ENST00000575857	BCOR	Q6W2J9	1755 aa		13.97	□□□□□ -0.17
SLC12A4-215	ENST00000575857	MMP10	P09238	476 aa		13.97	□□□□□ -0.17
SLC12A4-215	ENST00000575857	DDR1	Q08345	913 aa		13.97	□□□□□ -0.17
SLC12A4-215	ENST00000575857	CCDC30	Q5VVM6	783 aa		13.97	□□□□□ -0.17
SLC12A4-215	ENST00000575857	GPBP1L1	Q9HC44	474 aa	Predicted RBP	13.97	□□□□□ -0.17
SLC12A4-215	ENST00000575857	ERVV-1	B6SEH8	477 aa		13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	NFIX	Q14938	502 aa		13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	HLF	Q16534	295 aa		13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	CLEC4G	Q6UXB4	293 aa		13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	COPS6	Q7L5N1	327 aa		13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	NPM2	Q86SE8	214 aa	Known RBP	13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	XAGE3	Q8WTP9	111 aa		13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	CHMP4A	Q9BY43	222 aa		13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	HYPK	Q9NX55	129 aa		13.96	□□□□□ -0.17
SLC12A4-215	ENST00000575857	POLRMT	O00411	1230 aa	Known RBP	13.95	□□□□□ -0.18
SLC12A4-215	ENST00000575857	TBC1D9B	Q66K14	1250 aa		13.95	□□□□□ -0.18
SLC12A4-215	ENST00000575857	TCERG1	O14776	1098 aa	Known RBP	13.94	□□□□□ -0.18
SLC12A4-215	ENST00000575857	KIF6	Q6ZMV9	814 aa		13.94	□□□□□ -0.18
SLC12A4-215	ENST00000575857	ZBTB3	Q9H5J0	574 aa		13.94	□□□□□ -0.18
SLC12A4-215	ENST00000575857	PHAX	Q9H814	394 aa	Known RBP	13.94	□□□□□ -0.18
SLC12A4-215	ENST00000575857	AIMP1	Q12904	312 aa	Known RBP	13.93	□□□□□ -0.18
SLC12A4-215	ENST00000575857	GIGYF2	Q6Y7W6	1299 aa	Known RBP	13.93	□□□□□ -0.18
SLC12A4-215	ENST00000575857	G2E3	Q7L622	706 aa		13.93	□□□□□ -0.18
SLC12A4-215	ENST00000575857	PXDNL	A1KZ92	1463 aa		13.93	□□□□□ -0.18
SLC12A4-215	ENST00000575857		A0A0G2JLW4	131 aa		13.92	□□□□□ -0.18
SLC12A4-215	ENST00000575857	SLC4A2	P04920	1241 aa		13.92	□□□□□ -0.18
SLC12A4-215	ENST00000575857	PLBD2	Q8NHP8	589 aa		13.92	□□□□□ -0.18
SLC12A4-215	ENST00000575857	STK31	Q9BXU1	1019 aa		13.92	□□□□□ -0.18
SLC12A4-215	ENST00000575857	ZNF652	Q9Y2D9	606 aa		13.92	□□□□□ -0.18
SLC12A4-215	ENST00000575857	C10orf71	Q711Q0	1435 aa		13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	KIF3C	O14782	793 aa		13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	SERPINB2	P05120	415 aa		13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	CT47B1	P0C2W7	299 aa	Predicted RBP	13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	BICDL1	Q6ZP65	573 aa		13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	ANKRD13D	Q6ZTN6	518 aa		13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	ZNF34	Q8IZ26	560 aa		13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	ZNF428	Q96B54	188 aa		13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	PARP3	Q9Y6F1	533 aa		13.91	□□□□□ -0.18
SLC12A4-215	ENST00000575857	UBN2	Q6ZU65	1347 aa		13.9	□□□□□ -0.18
SLC12A4-215	ENST00000575857	NRXN2	Q9P2S2	1712 aa		13.9	□□□□□ -0.18
SLC12A4-215	ENST00000575857	HSPA6	P17066	643 aa		13.9	□□□□□ -0.18
SLC12A4-215	ENST00000575857	SSH1	Q8WYL5	1049 aa		13.9	□□□□□ -0.18
SLC12A4-215	ENST00000575857	SETDB2	Q96T68	719 aa		13.9	□□□□□ -0.18
SLC12A4-215	ENST00000575857	NIP7	Q9Y221	180 aa	Known RBP eCLIP	13.9	□□□□□ -0.18
SLC12A4-215	ENST00000575857	CARMIL3	Q8ND23	1372 aa		13.9	□□□□□ -0.18
SLC12A4-215	ENST00000575857	FLII	Q13045	1269 aa		13.89	□□□□□ -0.19
SLC12A4-215	ENST00000575857	TCIRG1	Q13488	830 aa		13.89	□□□□□ -0.19
SLC12A4-215	ENST00000575857	IFFO2	Q5TF58	517 aa		13.89	□□□□□ -0.19
SLC12A4-215	ENST00000575857	MRPL50	Q8N5N7	158 aa	Known RBP	13.89	□□□□□ -0.19
SLC12A4-215	ENST00000575857	BCS1L	Q9Y276	419 aa		13.89	□□□□□ -0.19
SLC12A4-215	ENST00000575857	NUP98	P52948	1817 aa		13.89	□□□□□ -0.19
SLC12A4-215	ENST00000575857	DPEP1	P16444	411 aa		13.88	□□□□□ -0.19
SLC12A4-215	ENST00000575857	ALDH1L2	Q3SY69	923 aa		13.88	□□□□□ -0.19
SLC12A4-215	ENST00000575857	HSP90AB3P	Q58FF7	597 aa		13.88	□□□□□ -0.19
SLC12A4-215	ENST00000575857	PRR5L	Q6MZQ0	368 aa		13.88	□□□□□ -0.19
SLC12A4-215	ENST00000575857	ISCA1	Q9BUE6	129 aa		13.88	□□□□□ -0.19
SLC12A4-215	ENST00000575857	KIAA1551	Q9HCM1	1747 aa		13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	IBTK	Q9P2D0	1353 aa	Predicted RBP	13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	PI4KAP2	A4QPH2	592 aa		13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	GPT	P24298	496 aa		13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	TRIM28	Q13263	835 aa	Known RBP	13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	SUSD4	Q5VX71	490 aa		13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	KSR2	Q6VAB6	950 aa		13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	PI4KAP1	Q8N8J0	262 aa		13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	AFDN	P55196	1824 aa	Known RBP	13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	KIF13B	Q9NQT8	1826 aa		13.87	□□□□□ -0.19
SLC12A4-215	ENST00000575857	CACNA1F	O60840	1977 aa		13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	NTSR2	O95665	410 aa		13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	DDX58	O95786	925 aa	Known RBP	13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	RARS	P54136	660 aa	Known RBP	13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	BRPF1	P55201	1214 aa	Predicted RBP	13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	PARP10	Q53GL7	1025 aa		13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	ARHGAP27	Q6ZUM4	889 aa		13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	RIC3	Q7Z5B4	369 aa		13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	NLRP10	Q86W26	655 aa		13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	METTL22	Q9BUU2	404 aa	Predicted RBP	13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	MAP3K2	Q9Y2U5	619 aa		13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	ARFGEF2	Q9Y6D5	1785 aa		13.86	□□□□□ -0.19
SLC12A4-215	ENST00000575857	KCNA3	P22001	575 aa		13.85	□□□□□ -0.19
SLC12A4-215	ENST00000575857	NBPF5P	Q86XG9	351 aa	Predicted RBP	13.85	□□□□□ -0.19
SLC12A4-215	ENST00000575857	CNBD1	Q8NA66	436 aa		13.85	□□□□□ -0.19

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