RNA–Protein interactions for RNA: ENST00000575711.1

RPAIN-217, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-217ENST00000575711 NLGN1Q8N2Q7 840 aa17.91■□□□□ 0.46
RPAIN-217ENST00000575711 PHAXQ9H814 394 aaKnown RBP17.91■□□□□ 0.46
RPAIN-217ENST00000575711 ZNF652Q9Y2D9 606 aa17.91■□□□□ 0.46
RPAIN-217ENST00000575711 ERVV-1B6SEH8 477 aa17.9■□□□□ 0.46
RPAIN-217ENST00000575711 RGL2O15211 777 aa17.9■□□□□ 0.46
RPAIN-217ENST00000575711 DDX58O95786 925 aaKnown RBP17.9■□□□□ 0.46
RPAIN-217ENST00000575711 ZBTB3Q9H5J0 574 aa17.9■□□□□ 0.46
RPAIN-217ENST00000575711 SPON1Q9HCB6 807 aa17.9■□□□□ 0.46
RPAIN-217ENST00000575711 ATF5Q9Y2D1 282 aaPredicted RBP17.9■□□□□ 0.46
RPAIN-217ENST00000575711 FKBP8Q14318 412 aa17.89■□□□□ 0.45
RPAIN-217ENST00000575711 CLEC4GQ6UXB4 293 aa17.89■□□□□ 0.45
RPAIN-217ENST00000575711 SSH1Q8WYL5 1049 aa17.89■□□□□ 0.45
RPAIN-217ENST00000575711 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
RPAIN-217ENST00000575711 SCN7AQ01118 1682 aa17.89■□□□□ 0.45
RPAIN-217ENST00000575711 POLD1P28340 1107 aa17.88■□□□□ 0.45
RPAIN-217ENST00000575711 FLIIQ13045 1269 aa17.88■□□□□ 0.45
RPAIN-217ENST00000575711 ANKRD13DQ6ZTN6 518 aa17.88■□□□□ 0.45
RPAIN-217ENST00000575711 PLBD2Q8NHP8 589 aa17.88■□□□□ 0.45
RPAIN-217ENST00000575711 SMC4Q9NTJ3 1288 aa17.88■□□□□ 0.45
RPAIN-217ENST00000575711 RARSP54136 660 aaKnown RBP17.87■□□□□ 0.45
RPAIN-217ENST00000575711 HLFQ16534 295 aa17.87■□□□□ 0.45
RPAIN-217ENST00000575711 G2E3Q7L622 706 aa17.87■□□□□ 0.45
RPAIN-217ENST00000575711 RIC3Q7Z5B4 369 aa17.87■□□□□ 0.45
RPAIN-217ENST00000575711 MRPL50Q8N5N7 158 aaKnown RBP17.87■□□□□ 0.45
RPAIN-217ENST00000575711 BCL2L13Q9BXK5 485 aa17.87■□□□□ 0.45
RPAIN-217ENST00000575711 BCORQ6W2J9 1755 aa17.86■□□□□ 0.45
RPAIN-217ENST00000575711 FKBP5Q13451 457 aaPredicted RBP17.86■□□□□ 0.45
RPAIN-217ENST00000575711 GIGYF2Q6Y7W6 1299 aaKnown RBP17.86■□□□□ 0.45
RPAIN-217ENST00000575711 MMP10P09238 476 aa17.85■□□□□ 0.45
RPAIN-217ENST00000575711 NFIXQ14938 502 aa17.85■□□□□ 0.45
RPAIN-217ENST00000575711 HSP90AB3PQ58FF7 597 aa17.85■□□□□ 0.45
RPAIN-217ENST00000575711 TBC1D9BQ66K14 1250 aa17.85■□□□□ 0.45
RPAIN-217ENST00000575711 BICDL1Q6ZP65 573 aa17.85■□□□□ 0.45
RPAIN-217ENST00000575711 TM4SF1P30408 202 aa17.84■□□□□ 0.45
RPAIN-217ENST00000575711 KSR2Q6VAB6 950 aa17.84■□□□□ 0.45
RPAIN-217ENST00000575711 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
RPAIN-217ENST00000575711 NIP7Q9Y221 180 aaKnown RBP eCLIP17.84■□□□□ 0.45
RPAIN-217ENST00000575711 PARP3Q9Y6F1 533 aa17.84■□□□□ 0.45
RPAIN-217ENST00000575711 ATP10DQ9P241 1426 aa17.83■□□□□ 0.45
RPAIN-217ENST00000575711 PI4KAP2A4QPH2 592 aa17.83■□□□□ 0.44
RPAIN-217ENST00000575711 PTGER2P43116 358 aa17.83■□□□□ 0.44
RPAIN-217ENST00000575711 PI4KAP1Q8N8J0 262 aa17.83■□□□□ 0.44
RPAIN-217ENST00000575711 SGIP1Q9BQI5 828 aa17.83■□□□□ 0.44
RPAIN-217ENST00000575711 MAP3K2Q9Y2U5 619 aa17.83■□□□□ 0.44
RPAIN-217ENST00000575711 PTPRCP08575 1304 aa17.82■□□□□ 0.44
RPAIN-217ENST00000575711 BRPF1P55201 1214 aaPredicted RBP17.82■□□□□ 0.44
RPAIN-217ENST00000575711 TCIRG1Q13488 830 aa17.82■□□□□ 0.44
RPAIN-217ENST00000575711 CACNA1FO60840 1977 aa17.82■□□□□ 0.44
RPAIN-217ENST00000575711 COL24A1Q17RW2 1714 aa17.81■□□□□ 0.44
RPAIN-217ENST00000575711 ADCY9O60503 1353 aa17.81■□□□□ 0.44
RPAIN-217ENST00000575711 CARMIL3Q8ND23 1372 aa17.81■□□□□ 0.44
RPAIN-217ENST00000575711 KIF16BQ96L93 1317 aa17.81■□□□□ 0.44
RPAIN-217ENST00000575711 POLRMTO00411 1230 aaKnown RBP17.81■□□□□ 0.44
RPAIN-217ENST00000575711 GPTP24298 496 aa17.81■□□□□ 0.44
RPAIN-217ENST00000575711 DDR1Q08345 913 aa17.81■□□□□ 0.44
RPAIN-217ENST00000575711 BCAR3O75815 825 aa17.8■□□□□ 0.44
RPAIN-217ENST00000575711 NEXNQ0ZGT2 675 aa17.8■□□□□ 0.44
RPAIN-217ENST00000575711 PARP10Q53GL7 1025 aa17.8■□□□□ 0.44
RPAIN-217ENST00000575711 ZNF34Q8IZ26 560 aa17.8■□□□□ 0.44
RPAIN-217ENST00000575711 DNAAF4Q8WXU2 420 aa17.8■□□□□ 0.44
RPAIN-217ENST00000575711 MYD88Q99836 296 aa17.8■□□□□ 0.44
RPAIN-217ENST00000575711 METTL22Q9BUU2 404 aaPredicted RBP17.8■□□□□ 0.44
RPAIN-217ENST00000575711 PPP1R1BQ9UD71 204 aaPredicted RBP17.8■□□□□ 0.44
RPAIN-217ENST00000575711 NOB1Q9ULX3 412 aaKnown RBP17.8■□□□□ 0.44
RPAIN-217ENST00000575711 SERPINB2P05120 415 aa17.79■□□□□ 0.44
RPAIN-217ENST00000575711 RCAN3Q9UKA8 241 aa17.79■□□□□ 0.44
RPAIN-217ENST00000575711 ARFGEF2Q9Y6D5 1785 aa17.79■□□□□ 0.44
RPAIN-217ENST00000575711 UBN2Q6ZU65 1347 aa17.78■□□□□ 0.44
RPAIN-217ENST00000575711 NUP98P52948 1817 aa17.78■□□□□ 0.44
RPAIN-217ENST00000575711 F6X3S4 739 aa17.78■□□□□ 0.44
RPAIN-217ENST00000575711 ATP5J2-PTCD1G3V325 749 aa17.78■□□□□ 0.44
RPAIN-217ENST00000575711 NPHP1O15259 732 aa17.78■□□□□ 0.44
RPAIN-217ENST00000575711 NBPF5PQ86XG9 351 aaPredicted RBP17.78■□□□□ 0.44
RPAIN-217ENST00000575711 ISCA1Q9BUE6 129 aa17.78■□□□□ 0.44
RPAIN-217ENST00000575711 LRP5O75197 1615 aa17.77■□□□□ 0.44
RPAIN-217ENST00000575711 FAM177BA6PVY3 158 aa17.77■□□□□ 0.44
RPAIN-217ENST00000575711 IPO8O15397 1037 aaKnown RBP17.77■□□□□ 0.44
RPAIN-217ENST00000575711 TPTE2Q6XPS3 522 aa17.77■□□□□ 0.44
RPAIN-217ENST00000575711 PPP1R42Q7Z4L9 355 aa17.77■□□□□ 0.44
RPAIN-217ENST00000575711 NLRP10Q86W26 655 aa17.77■□□□□ 0.44
RPAIN-217ENST00000575711 CNBD1Q8NA66 436 aa17.77■□□□□ 0.44
RPAIN-217ENST00000575711 API5Q9BZZ5 524 aaKnown RBP17.77■□□□□ 0.44
RPAIN-217ENST00000575711 NYXQ9GZU5 481 aa17.77■□□□□ 0.44
RPAIN-217ENST00000575711 GTF2E1P29083 439 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-217ENST00000575711 TRIM28Q13263 835 aaKnown RBP17.76■□□□□ 0.43
RPAIN-217ENST00000575711 SUSD4Q5VX71 490 aa17.76■□□□□ 0.43
RPAIN-217ENST00000575711 SLC4A10Q6U841 1118 aa17.76■□□□□ 0.43
RPAIN-217ENST00000575711 ARHGAP45Q92619 1136 aa17.76■□□□□ 0.43
RPAIN-217ENST00000575711 FRAT1Q92837 279 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-217ENST00000575711 IBTKQ9P2D0 1353 aaPredicted RBP17.76■□□□□ 0.43
RPAIN-217ENST00000575711 CCDC191Q8NCU4 936 aa17.75■□□□□ 0.43
RPAIN-217ENST00000575711 UTP14AQ9BVJ6 771 aaKnown RBP17.75■□□□□ 0.43
RPAIN-217ENST00000575711 ANKRD36CQ5JPF3 1778 aa17.74■□□□□ 0.43
RPAIN-217ENST00000575711 IGKV5-2P06315 115 aa17.74■□□□□ 0.43
RPAIN-217ENST00000575711 ST5P78524 1137 aa17.74■□□□□ 0.43
RPAIN-217ENST00000575711 ZKSCAN2Q63HK3 967 aa17.74■□□□□ 0.43
RPAIN-217ENST00000575711 PRR5LQ6MZQ0 368 aa17.74■□□□□ 0.43
RPAIN-217ENST00000575711 KLHL34Q8N239 644 aa17.74■□□□□ 0.43
RPAIN-217ENST00000575711 LINS1Q8NG48 757 aa17.74■□□□□ 0.43
RPAIN-217ENST00000575711 CWC25Q9NXE8 425 aaPredicted RBP17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms