RNA–Protein interactions for RNA: ENST00000575333.5

TOM1L1-220, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 1 (best) BASIC

Gene TOM1L1, Length 1,849 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-220ENST00000575333 CCDC186Q7Z3E2 898 aa9.4□□□□□ -0.91
TOM1L1-220ENST00000575333 TRMT2AQ8IZ69 625 aaKnown RBP9.4□□□□□ -0.91
TOM1L1-220ENST00000575333 RNF214Q8ND24 703 aa9.4□□□□□ -0.91
TOM1L1-220ENST00000575333 MIEF2Q96C03 454 aa9.4□□□□□ -0.91
TOM1L1-220ENST00000575333 UBXN6Q9BZV1 441 aa9.4□□□□□ -0.91
TOM1L1-220ENST00000575333 EIF3CLB5ME19 914 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 KDM4AO75164 1064 aa9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 PRPF40AO75400 957 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 MLLT3P42568 568 aaPredicted RBP9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 PDIA6Q15084 440 aa9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 TEX11Q8IYF3 940 aa9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 KLHL23Q8NBE8 558 aa9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 TSPAN18Q96SJ8 248 aa9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 EIF3CQ99613 913 aaKnown RBP9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 RPS6KL1Q9Y6S9 549 aa9.39□□□□□ -0.91
TOM1L1-220ENST00000575333 A0A087WUV0 522 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 TSPOAP1O95153 1857 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 SLU7O95391 586 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 TUBB4AP04350 444 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 EIF5P55010 431 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 SLFN5Q08AF3 891 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 NEDD9Q14511 834 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 MAMSTRQ6ZN01 415 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 FILIP1Q7Z7B0 1213 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 C17orf53Q8N3J3 647 aaPredicted RBP9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 TATDN2Q93075 761 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 GNL3LQ9NVN8 582 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 PYCARDQ9ULZ3 195 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 FAM135AQ9P2D6 1515 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 CRYMQ14894 314 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 FAXDC2Q96IV6 333 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 RBM27Q9P2N5 1060 aaKnown RBP9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 TRAK1Q9UPV9 953 aa9.38□□□□□ -0.91
TOM1L1-220ENST00000575333 RALGAPBQ86X10 1494 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 GCFC2P16383 781 aaKnown RBP9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 MAGEA8P43361 318 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 PLA2G4AP47712 749 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 NBPF8Q3BBV2 869 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 CEP135Q66GS9 1140 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 TMCO3Q6UWJ1 677 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 GBP6Q6ZN66 633 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 TADA2BQ86TJ2 420 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 MSL3Q8N5Y2 521 aaKnown RBP9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 PTCD2Q8WV60 388 aaKnown RBP9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 SMARCE1Q969G3 411 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 DDX11Q96FC9 970 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 KCNF1Q9H3M0 494 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 ST7Q9NRC1 585 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 GPRASP1Q5JY77 1395 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 GLI2P10070 1586 aa9.37□□□□□ -0.91
TOM1L1-220ENST00000575333 ZBTB7CA1YPR0 619 aa9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 NEMFO60524 1076 aa9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 ZRANB2O95218 330 aaKnown RBP eCLIP9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 PAX7P23759 505 aa9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 RBBP5Q15291 538 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 GAS2L2Q8NHY3 880 aa9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 GTF3C6Q969F1 213 aa9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 OTUD5Q96G74 571 aa9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 TRIM6Q9C030 488 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 SPATS2LQ9NUQ6 558 aaKnown RBP9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 SYNMO15061 1565 aa9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 TROQ12816 1431 aaPredicted RBP9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 MAGI3Q5TCQ9 1506 aa9.36□□□□□ -0.91
TOM1L1-220ENST00000575333 SPDYE16A6NNV3 312 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 SLC34A2O95436 690 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 ELF1P32519 619 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 CD151P48509 253 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 MNAT1P51948 309 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 INHBEP58166 350 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 ZRSR2Q15696 482 aaKnown RBP9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 C1QTNF12Q5T7M4 302 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 MORC1Q86VD1 984 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 TMTC2Q8N394 836 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 KIF2CQ99661 725 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 VEZTQ9HBM0 779 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 ANKRD30BQ9BXX2 1392 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 ATP10AO60312 1499 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 PPFIA2O75334 1257 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 ELF2Q15723 593 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 LMOD2Q6P5Q4 547 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 CCDC26Q8TAB7 109 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 ZNF428Q96B54 188 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 CPSF2Q9P2I0 782 aaKnown RBP9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 ZNF215Q9UL58 517 aaPredicted RBP9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 SMC3Q9UQE7 1217 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 MAP3K4Q9Y6R4 1608 aa9.35□□□□□ -0.91
TOM1L1-220ENST00000575333 SENP3-EIF4A1A0A087X0R7 540 aa9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 PES1O00541 588 aaKnown RBP9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 KINO60870 393 aaKnown RBP9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 NEBLO76041 1014 aa9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 HOXB3P14651 431 aaPredicted RBP9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 CCDC183Q5T5S1 534 aa9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 C16orf45Q96MC5 204 aaPredicted RBP9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 IFT57Q9NWB7 429 aa9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 CLIP2Q9UDT6 1046 aa9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 ABCA9Q8IUA7 1624 aa9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 UHRF1BP1Q6BDS2 1440 aa9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 CD109Q6YHK3 1445 aa9.34□□□□□ -0.91
TOM1L1-220ENST00000575333 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms