RNA–Protein interactions for RNA: ENST00000575185.1

SPNS3-203, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 5

Gene SPNS3, Length 496 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-203ENST00000575185 MKRN1Q9UHC7 482 aaKnown RBP27.96■■■□□ 2.07
SPNS3-203ENST00000575185 PIP4K2AP48426 406 aaPredicted RBP27.95■■■□□ 2.06
SPNS3-203ENST00000575185 GAS2L2Q8NHY3 880 aa27.95■■■□□ 2.06
SPNS3-203ENST00000575185 FMNL2Q96PY5 1086 aa27.95■■■□□ 2.06
SPNS3-203ENST00000575185 NPHP1O15259 732 aa27.94■■■□□ 2.06
SPNS3-203ENST00000575185 SRGNP10124 158 aa27.94■■■□□ 2.06
SPNS3-203ENST00000575185 CEMIPQ8WUJ3 1361 aa27.94■■■□□ 2.06
SPNS3-203ENST00000575185 SCN4AP35499 1836 aa27.93■■■□□ 2.06
SPNS3-203ENST00000575185 STYK1Q6J9G0 422 aa27.93■■■□□ 2.06
SPNS3-203ENST00000575185 CNKSR1Q969H4 720 aa27.93■■■□□ 2.06
SPNS3-203ENST00000575185 CREBZFQ9NS37 354 aa27.93■■■□□ 2.06
SPNS3-203ENST00000575185 ST5P78524 1137 aa27.92■■■□□ 2.06
SPNS3-203ENST00000575185 DZIP3Q86Y13 1208 aaKnown RBP27.92■■■□□ 2.06
SPNS3-203ENST00000575185 PRAMEF22A3QJZ6 481 aa27.9■■■□□ 2.06
SPNS3-203ENST00000575185 MASTLQ96GX5 879 aa27.9■■■□□ 2.06
SPNS3-203ENST00000575185 NPM2Q86SE8 214 aaKnown RBP27.89■■■□□ 2.06
SPNS3-203ENST00000575185 PHACTR3Q96KR7 559 aa27.89■■■□□ 2.06
SPNS3-203ENST00000575185 USP16Q9Y5T5 823 aa27.89■■■□□ 2.06
SPNS3-203ENST00000575185 BTBD11A6QL63 1104 aa27.88■■■□□ 2.05
SPNS3-203ENST00000575185 SOGA3Q5TF21 947 aa27.86■■■□□ 2.05
SPNS3-203ENST00000575185 C7orf43Q8WVR3 580 aa27.86■■■□□ 2.05
SPNS3-203ENST00000575185 ADAMTSL1Q8N6G6 1762 aa27.86■■■□□ 2.05
SPNS3-203ENST00000575185 CNTNAP1P78357 1384 aa27.86■■■□□ 2.05
SPNS3-203ENST00000575185 PRKAR2BP31323 418 aa27.85■■■□□ 2.05
SPNS3-203ENST00000575185 OLFM4Q6UX06 510 aa27.85■■■□□ 2.05
SPNS3-203ENST00000575185 NBPF5PQ86XG9 351 aaPredicted RBP27.85■■■□□ 2.05
SPNS3-203ENST00000575185 PASKQ96RG2 1323 aa27.85■■■□□ 2.05
SPNS3-203ENST00000575185 ZNF541Q9H0D2 1346 aa27.85■■■□□ 2.05
SPNS3-203ENST00000575185 NPC1L1Q9UHC9 1359 aa27.85■■■□□ 2.05
SPNS3-203ENST00000575185 TAF1DQ9H5J8 278 aaPredicted RBP27.84■■■□□ 2.05
SPNS3-203ENST00000575185 FOXN1O15353 648 aa27.83■■■□□ 2.05
SPNS3-203ENST00000575185 CCDC93Q567U6 631 aa27.83■■■□□ 2.05
SPNS3-203ENST00000575185 LDHDQ86WU2 507 aa27.83■■■□□ 2.05
SPNS3-203ENST00000575185 L3MBTL3Q96JM7 780 aaPredicted RBP27.83■■■□□ 2.05
SPNS3-203ENST00000575185 RSPH6AQ9H0K4 717 aa27.83■■■□□ 2.05
SPNS3-203ENST00000575185 IQCA1LA6NCM1 817 aa27.82■■■□□ 2.04
SPNS3-203ENST00000575185 ZNF277Q9NRM2 450 aaPredicted RBP27.82■■■□□ 2.04
SPNS3-203ENST00000575185 LAMB4A4D0S4 1761 aa27.81■■■□□ 2.04
SPNS3-203ENST00000575185 NPR1P16066 1061 aa27.8■■■□□ 2.04
SPNS3-203ENST00000575185 FAM177BA6PVY3 158 aa27.79■■■□□ 2.04
SPNS3-203ENST00000575185 FKBP4Q02790 459 aaKnown RBP eCLIP27.79■■■□□ 2.04
SPNS3-203ENST00000575185 EAPPQ56P03 285 aaPredicted RBP27.79■■■□□ 2.04
SPNS3-203ENST00000575185 CLEC4GQ6UXB4 293 aa27.79■■■□□ 2.04
SPNS3-203ENST00000575185 MCM10Q7L590 875 aa27.79■■■□□ 2.04
SPNS3-203ENST00000575185 NBPF26B4DH59 902 aa27.78■■■□□ 2.04
SPNS3-203ENST00000575185 NBPF10Q6P3W6 841 aaKnown RBP27.78■■■□□ 2.04
SPNS3-203ENST00000575185 NBPF15Q8N660 670 aa27.78■■■□□ 2.04
SPNS3-203ENST00000575185 NIP7Q9Y221 180 aaKnown RBP eCLIP27.78■■■□□ 2.04
SPNS3-203ENST00000575185 ZNF652Q9Y2D9 606 aa27.78■■■□□ 2.04
SPNS3-203ENST00000575185 KLRG2A4D1S0 409 aaPredicted RBP27.77■■■□□ 2.04
SPNS3-203ENST00000575185 ITGBL1O95965 494 aaPredicted RBP27.77■■■□□ 2.04
SPNS3-203ENST00000575185 SNRPA1P09661 255 aaKnown RBP27.76■■■□□ 2.03
SPNS3-203ENST00000575185 VEGFBP49765 207 aa27.76■■■□□ 2.03
SPNS3-203ENST00000575185 DCTN1Q14203 1278 aa27.75■■■□□ 2.03
SPNS3-203ENST00000575185 RNF123Q5XPI4 1314 aa27.74■■■□□ 2.03
SPNS3-203ENST00000575185 TMEM88BA6NKF7 163 aa27.74■■■□□ 2.03
SPNS3-203ENST00000575185 HACL1Q9UJ83 578 aa27.74■■■□□ 2.03
SPNS3-203ENST00000575185 COL4A5P29400 1685 aa27.74■■■□□ 2.03
SPNS3-203ENST00000575185 SNED1Q8TER0 1413 aa27.74■■■□□ 2.03
SPNS3-203ENST00000575185 NUP98P52948 1817 aa27.74■■■□□ 2.03
SPNS3-203ENST00000575185 EPHX2P34913 555 aa27.73■■■□□ 2.03
SPNS3-203ENST00000575185 HLFQ16534 295 aa27.73■■■□□ 2.03
SPNS3-203ENST00000575185 TPTE2Q6XPS3 522 aa27.73■■■□□ 2.03
SPNS3-203ENST00000575185 CLEC11AQ9Y240 323 aa27.73■■■□□ 2.03
SPNS3-203ENST00000575185 LTBP1Q14766 1721 aa27.72■■■□□ 2.03
SPNS3-203ENST00000575185 RTF1Q92541 710 aaKnown RBP27.72■■■□□ 2.03
SPNS3-203ENST00000575185 ABCC12Q96J65 1359 aa27.72■■■□□ 2.03
SPNS3-203ENST00000575185 IARSP41252 1262 aaKnown RBP27.71■■■□□ 2.03
SPNS3-203ENST00000575185 CFAP53Q96M91 514 aa27.71■■■□□ 2.03
SPNS3-203ENST00000575185 DLG5Q8TDM6 1919 aa27.71■■■□□ 2.03
SPNS3-203ENST00000575185 MAP1SQ66K74 1059 aaPredicted RBP27.7■■■□□ 2.02
SPNS3-203ENST00000575185 RTKN2Q8IZC4 609 aa27.7■■■□□ 2.02
SPNS3-203ENST00000575185 SYNE4Q8N205 404 aa27.7■■■□□ 2.02
SPNS3-203ENST00000575185 PRDM10Q9NQV6 1147 aa27.7■■■□□ 2.02
SPNS3-203ENST00000575185 KDM3BQ7LBC6 1761 aa27.7■■■□□ 2.02
SPNS3-203ENST00000575185 FZD9O00144 591 aa27.69■■■□□ 2.02
SPNS3-203ENST00000575185 U2AF1L5P0DN76 240 aaPredicted RBP27.69■■■□□ 2.02
SPNS3-203ENST00000575185 U2AF1Q01081 240 aaKnown RBP eCLIP27.69■■■□□ 2.02
SPNS3-203ENST00000575185 AIDAQ96BJ3 306 aa27.69■■■□□ 2.02
SPNS3-203ENST00000575185 CTCFP49711 727 aaPredicted RBP27.68■■■□□ 2.02
SPNS3-203ENST00000575185 SLC51AQ86UW1 340 aa27.67■■■□□ 2.02
SPNS3-203ENST00000575185 RGL2O15211 777 aa27.66■■■□□ 2.02
SPNS3-203ENST00000575185 NUTM1Q86Y26 1132 aa27.66■■■□□ 2.02
SPNS3-203ENST00000575185 CNTROBQ8N137 903 aa27.66■■■□□ 2.02
SPNS3-203ENST00000575185 WBP1LQ9NX94 342 aa27.66■■■□□ 2.02
SPNS3-203ENST00000575185 MIS18AQ9NYP9 233 aa27.66■■■□□ 2.02
SPNS3-203ENST00000575185 GTF2E1P29083 439 aaPredicted RBP27.65■■■□□ 2.02
SPNS3-203ENST00000575185 ALDH1B1P30837 517 aa27.65■■■□□ 2.02
SPNS3-203ENST00000575185 LBX1P52954 281 aa27.65■■■□□ 2.02
SPNS3-203ENST00000575185 GPC2Q8N158 579 aa27.65■■■□□ 2.02
SPNS3-203ENST00000575185 NGEFQ8N5V2 710 aa27.65■■■□□ 2.02
SPNS3-203ENST00000575185 NUDCQ9Y266 331 aa27.65■■■□□ 2.02
SPNS3-203ENST00000575185 RASSF10A6NK89 507 aa27.64■■■□□ 2.02
SPNS3-203ENST00000575185 PNMA8AQ86V59 439 aaPredicted RBP27.64■■■□□ 2.02
SPNS3-203ENST00000575185 CRY2Q49AN0 593 aa27.63■■■□□ 2.01
SPNS3-203ENST00000575185 THSD7BQ9C0I4 1608 aa27.63■■■□□ 2.01
SPNS3-203ENST00000575185 PPP2R1AP30153 589 aa27.62■■■□□ 2.01
SPNS3-203ENST00000575185 PSMD1Q99460 953 aa27.62■■■□□ 2.01
SPNS3-203ENST00000575185 GJA3Q9Y6H8 435 aa27.62■■■□□ 2.01
SPNS3-203ENST00000575185 ZEB1P37275 1124 aaPredicted RBP27.61■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms