RNA–Protein interactions for RNA: ENST00000574701.5

LITAF-213, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-213ENST00000574701 TBC1D9BQ66K14 1250 aa31.32■■■□□ 2.6
LITAF-213ENST00000574701 CLEC4GQ6UXB4 293 aa31.32■■■□□ 2.6
LITAF-213ENST00000574701 TTLL7Q6ZT98 887 aa31.32■■■□□ 2.6
LITAF-213ENST00000574701 TSPYL6Q8N831 410 aa31.32■■■□□ 2.6
LITAF-213ENST00000574701 SPINK5Q9NQ38 1064 aaPredicted RBP31.32■■■□□ 2.6
LITAF-213ENST00000574701 CD2APQ9Y5K6 639 aa31.32■■■□□ 2.6
LITAF-213ENST00000574701 POLRMTO00411 1230 aaKnown RBP31.31■■■□□ 2.6
LITAF-213ENST00000574701 ERVV-1B6SEH8 477 aa31.3■■■□□ 2.6
LITAF-213ENST00000574701 E9PSI1 815 aa31.3■■■□□ 2.6
LITAF-213ENST00000574701 LRP10Q7Z4F1 713 aa31.3■■■□□ 2.6
LITAF-213ENST00000574701 HYPKQ9NX55 129 aa31.3■■■□□ 2.6
LITAF-213ENST00000574701 C10orf71Q711Q0 1435 aa31.3■■■□□ 2.6
LITAF-213ENST00000574701 CARMIL3Q8ND23 1372 aa31.3■■■□□ 2.6
LITAF-213ENST00000574701 AFDNP55196 1824 aaKnown RBP31.29■■■□□ 2.6
LITAF-213ENST00000574701 EXOSC9Q06265 439 aaKnown RBP31.29■■■□□ 2.6
LITAF-213ENST00000574701 NUP98P52948 1817 aa31.28■■■□□ 2.6
LITAF-213ENST00000574701 KIF13BQ9NQT8 1826 aa31.28■■■□□ 2.6
LITAF-213ENST00000574701 AIMP1Q12904 312 aaKnown RBP31.28■■■□□ 2.6
LITAF-213ENST00000574701 XAGE3Q8WTP9 111 aa31.28■■■□□ 2.6
LITAF-213ENST00000574701 SETDB2Q96T68 719 aa31.28■■■□□ 2.6
LITAF-213ENST00000574701 ZBTB3Q9H5J0 574 aa31.28■■■□□ 2.6
LITAF-213ENST00000574701 NRXN2Q9P2S2 1712 aa31.27■■■□□ 2.6
LITAF-213ENST00000574701 SERPINB2P05120 415 aa31.27■■■□□ 2.6
LITAF-213ENST00000574701 COPS6Q7L5N1 327 aa31.27■■■□□ 2.6
LITAF-213ENST00000574701 STK31Q9BXU1 1019 aa31.27■■■□□ 2.6
LITAF-213ENST00000574701 HNRNPUQ00839 825 aaKnown RBP eCLIP31.25■■■□□ 2.59
LITAF-213ENST00000574701 HLFQ16534 295 aa31.25■■■□□ 2.59
LITAF-213ENST00000574701 NPHP1O15259 732 aa31.24■■■□□ 2.59
LITAF-213ENST00000574701 NIP7Q9Y221 180 aaKnown RBP eCLIP31.24■■■□□ 2.59
LITAF-213ENST00000574701 ATP10DQ9P241 1426 aa31.24■■■□□ 2.59
LITAF-213ENST00000574701 NLGN2Q8NFZ4 835 aa31.23■■■□□ 2.59
LITAF-213ENST00000574701 SLFN5Q08AF3 891 aa31.22■■■□□ 2.59
LITAF-213ENST00000574701 ANKRD36CQ5JPF3 1778 aa31.21■■■□□ 2.59
LITAF-213ENST00000574701 DCAF8L1A6NGE4 600 aa31.21■■■□□ 2.59
LITAF-213ENST00000574701 GIGYF2Q6Y7W6 1299 aaKnown RBP31.21■■■□□ 2.59
LITAF-213ENST00000574701 HSP90AB3PQ58FF7 597 aa31.2■■■□□ 2.59
LITAF-213ENST00000574701 CNBD1Q8NA66 436 aa31.2■■■□□ 2.59
LITAF-213ENST00000574701 VAMP4O75379 141 aa31.19■■■□□ 2.58
LITAF-213ENST00000574701 NBPF5PQ86XG9 351 aaPredicted RBP31.19■■■□□ 2.58
LITAF-213ENST00000574701 CACNA1FO60840 1977 aa31.18■■■□□ 2.58
LITAF-213ENST00000574701 PLBD2Q8NHP8 589 aa31.18■■■□□ 2.58
LITAF-213ENST00000574701 CDCA7LQ96GN5 454 aa31.18■■■□□ 2.58
LITAF-213ENST00000574701 ARFGEF2Q9Y6D5 1785 aa31.17■■■□□ 2.58
LITAF-213ENST00000574701 TCERG1O14776 1098 aaKnown RBP31.17■■■□□ 2.58
LITAF-213ENST00000574701 TGFB2P61812 414 aa31.17■■■□□ 2.58
LITAF-213ENST00000574701 ST5P78524 1137 aa31.17■■■□□ 2.58
LITAF-213ENST00000574701 ANKRD13DQ6ZTN6 518 aa31.17■■■□□ 2.58
LITAF-213ENST00000574701 PHAXQ9H814 394 aaKnown RBP31.17■■■□□ 2.58
LITAF-213ENST00000574701 PXDNLA1KZ92 1463 aa31.16■■■□□ 2.58
LITAF-213ENST00000574701 KIAA1551Q9HCM1 1747 aa31.16■■■□□ 2.58
LITAF-213ENST00000574701 DDX58O95786 925 aaKnown RBP31.16■■■□□ 2.58
LITAF-213ENST00000574701 N4BP2Q86UW6 1770 aaPredicted RBP31.15■■■□□ 2.58
LITAF-213ENST00000574701 GPTP24298 496 aa31.15■■■□□ 2.58
LITAF-213ENST00000574701 PRR5LQ6MZQ0 368 aa31.15■■■□□ 2.58
LITAF-213ENST00000574701 NYXQ9GZU5 481 aa31.14■■■□□ 2.58
LITAF-213ENST00000574701 FAM177BA6PVY3 158 aa31.13■■■□□ 2.57
LITAF-213ENST00000574701 SLC4A2P04920 1241 aa31.13■■■□□ 2.57
LITAF-213ENST00000574701 PARP10Q53GL7 1025 aa31.13■■■□□ 2.57
LITAF-213ENST00000574701 TPTE2Q6XPS3 522 aa31.13■■■□□ 2.57
LITAF-213ENST00000574701 RIC3Q7Z5B4 369 aa31.13■■■□□ 2.57
LITAF-213ENST00000574701 ZNF34Q8IZ26 560 aa31.13■■■□□ 2.57
LITAF-213ENST00000574701 IBTKQ9P2D0 1353 aaPredicted RBP31.13■■■□□ 2.57
LITAF-213ENST00000574701 GTF2E1P29083 439 aaPredicted RBP31.12■■■□□ 2.57
LITAF-213ENST00000574701 PELP1Q8IZL8 1130 aaKnown RBP31.12■■■□□ 2.57
LITAF-213ENST00000574701 UBN2Q6ZU65 1347 aa31.12■■■□□ 2.57
LITAF-213ENST00000574701 ANKRD31Q8N7Z5 1873 aa31.1■■■□□ 2.57
LITAF-213ENST00000574701 TCIRG1Q13488 830 aa31.1■■■□□ 2.57
LITAF-213ENST00000574701 PPP1R42Q7Z4L9 355 aa31.1■■■□□ 2.57
LITAF-213ENST00000574701 TRMT2AQ8IZ69 625 aaKnown RBP31.1■■■□□ 2.57
LITAF-213ENST00000574701 ZBED9Q6R2W3 1325 aa31.09■■■□□ 2.57
LITAF-213ENST00000574701 DPEP1P16444 411 aa31.09■■■□□ 2.57
LITAF-213ENST00000574701 A0A0G2JLW4 131 aa31.08■■■□□ 2.57
LITAF-213ENST00000574701 PDE6BP35913 854 aa31.08■■■□□ 2.57
LITAF-213ENST00000574701 GPR162Q16538 588 aa31.08■■■□□ 2.57
LITAF-213ENST00000574701 CCDC24Q8N4L8 307 aa31.08■■■□□ 2.57
LITAF-213ENST00000574701 BRIP1Q9BX63 1249 aa31.08■■■□□ 2.57
LITAF-213ENST00000574701 FLIIQ13045 1269 aa31.07■■■□□ 2.56
LITAF-213ENST00000574701 PDZRN3Q9UPQ7 1066 aa31.07■■■□□ 2.56
LITAF-213ENST00000574701 DLEC1Q9Y238 1755 aa31.07■■■□□ 2.56
LITAF-213ENST00000574701 SUSD4Q5VX71 490 aa31.06■■■□□ 2.56
LITAF-213ENST00000574701 BRCA1P38398 1863 aaKnown RBP31.06■■■□□ 2.56
LITAF-213ENST00000574701 G2E3Q7L622 706 aa31.05■■■□□ 2.56
LITAF-213ENST00000574701 ZNF428Q96B54 188 aa31.05■■■□□ 2.56
LITAF-213ENST00000574701 UTP14AQ9BVJ6 771 aaKnown RBP31.05■■■□□ 2.56
LITAF-213ENST00000574701 RNF123Q5XPI4 1314 aa31.04■■■□□ 2.56
LITAF-213ENST00000574701 H0YIN7 160 aa31.04■■■□□ 2.56
LITAF-213ENST00000574701 CT47B1P0C2W7 299 aaPredicted RBP31.04■■■□□ 2.56
LITAF-213ENST00000574701 CHRNA5P30532 468 aa31.04■■■□□ 2.56
LITAF-213ENST00000574701 FKBP5Q13451 457 aaPredicted RBP31.04■■■□□ 2.56
LITAF-213ENST00000574701 KSR2Q6VAB6 950 aa31.04■■■□□ 2.56
LITAF-213ENST00000574701 NLRP10Q86W26 655 aa31.04■■■□□ 2.56
LITAF-213ENST00000574701 C2CD5Q86YS7 1000 aa31.04■■■□□ 2.56
LITAF-213ENST00000574701 WWC3Q9ULE0 1092 aa31.04■■■□□ 2.56
LITAF-213ENST00000574701 NTSR2O95665 410 aa31.03■■■□□ 2.56
LITAF-213ENST00000574701 NUTM1Q86Y26 1132 aa31.03■■■□□ 2.56
LITAF-213ENST00000574701 MAP3K2Q9Y2U5 619 aa31.03■■■□□ 2.56
LITAF-213ENST00000574701 COL11A2P13942 1736 aaPredicted RBP31.02■■■□□ 2.56
LITAF-213ENST00000574701 PI4KAP2A4QPH2 592 aa31.02■■■□□ 2.56
LITAF-213ENST00000574701 PI4KAP1Q8N8J0 262 aa31.02■■■□□ 2.56
LITAF-213ENST00000574701 MYD88Q99836 296 aa31.02■■■□□ 2.56
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms