RNA–Protein interactions for RNA: ENST00000574412.5

CXCL16-203, Transcript of C-X-C motif chemokine ligand 16, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CXCL16, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL16-203ENST00000574412 SF3B2Q13435 895 aaKnown RBP26.85■■□□□ 1.89
CXCL16-203ENST00000574412 ANKRD13DQ6ZTN6 518 aa26.85■■□□□ 1.89
CXCL16-203ENST00000574412 DNAAF4Q8WXU2 420 aa26.85■■□□□ 1.89
CXCL16-203ENST00000574412 GNPATO15228 680 aa26.84■■□□□ 1.89
CXCL16-203ENST00000574412 MVPQ14764 893 aaKnown RBP26.84■■□□□ 1.89
CXCL16-203ENST00000574412 NPM2Q86SE8 214 aaKnown RBP26.84■■□□□ 1.89
CXCL16-203ENST00000574412 N4BP2Q86UW6 1770 aaPredicted RBP26.84■■□□□ 1.89
CXCL16-203ENST00000574412 EIF5P55010 431 aaKnown RBP26.83■■□□□ 1.89
CXCL16-203ENST00000574412 EZH2Q15910 746 aaKnown RBP26.82■■□□□ 1.88
CXCL16-203ENST00000574412 CCDC136Q96JN2 1154 aa26.82■■□□□ 1.88
CXCL16-203ENST00000574412 TBC1D2BQ9UPU7 963 aa26.82■■□□□ 1.88
CXCL16-203ENST00000574412 RC3H1Q5TC82 1133 aaKnown RBP26.82■■□□□ 1.88
CXCL16-203ENST00000574412 DEFB132Q7Z7B7 95 aa26.82■■□□□ 1.88
CXCL16-203ENST00000574412 AK7Q96M32 723 aa26.82■■□□□ 1.88
CXCL16-203ENST00000574412 KIF6Q6ZMV9 814 aa26.81■■□□□ 1.88
CXCL16-203ENST00000574412 AMIGO3Q86WK7 504 aa26.81■■□□□ 1.88
CXCL16-203ENST00000574412 PLBD2Q8NHP8 589 aa26.81■■□□□ 1.88
CXCL16-203ENST00000574412 COL15A1P39059 1388 aa26.81■■□□□ 1.88
CXCL16-203ENST00000574412 UBR3Q6ZT12 1888 aa26.8■■□□□ 1.88
CXCL16-203ENST00000574412 INTS3Q68E01 1043 aaKnown RBP26.8■■□□□ 1.88
CXCL16-203ENST00000574412 DZIP3Q86Y13 1208 aaKnown RBP26.8■■□□□ 1.88
CXCL16-203ENST00000574412 PXDNLA1KZ92 1463 aa26.8■■□□□ 1.88
CXCL16-203ENST00000574412 AFDNP55196 1824 aaKnown RBP26.8■■□□□ 1.88
CXCL16-203ENST00000574412 PHF14O94880 888 aa26.79■■□□□ 1.88
CXCL16-203ENST00000574412 CAMKK2Q96RR4 588 aa26.79■■□□□ 1.88
CXCL16-203ENST00000574412 MYD88Q99836 296 aa26.79■■□□□ 1.88
CXCL16-203ENST00000574412 RPS6KA4O75676 772 aa26.78■■□□□ 1.88
CXCL16-203ENST00000574412 BAG6P46379 1132 aa26.78■■□□□ 1.88
CXCL16-203ENST00000574412 CCT4P50991 539 aaKnown RBP26.78■■□□□ 1.88
CXCL16-203ENST00000574412 RTCBQ9Y3I0 505 aaKnown RBP26.78■■□□□ 1.88
CXCL16-203ENST00000574412 NUP98P52948 1817 aa26.78■■□□□ 1.88
CXCL16-203ENST00000574412 MAP3K15Q6ZN16 1313 aa26.77■■□□□ 1.88
CXCL16-203ENST00000574412 CWF19L2Q2TBE0 894 aaKnown RBP26.77■■□□□ 1.88
CXCL16-203ENST00000574412 BEND3Q5T5X7 828 aa26.77■■□□□ 1.88
CXCL16-203ENST00000574412 METTL22Q9BUU2 404 aaPredicted RBP26.76■■□□□ 1.87
CXCL16-203ENST00000574412 SRCIN1Q9C0H9 1055 aa26.76■■□□□ 1.87
CXCL16-203ENST00000574412 DDX19BQ9UMR2 479 aa26.76■■□□□ 1.87
CXCL16-203ENST00000574412 C4AP0C0L4 1744 aa26.76■■□□□ 1.87
CXCL16-203ENST00000574412 ATP5J2-PTCD1G3V325 749 aa26.76■■□□□ 1.87
CXCL16-203ENST00000574412 HLFQ16534 295 aa26.76■■□□□ 1.87
CXCL16-203ENST00000574412 TUBGCP6Q96RT7 1819 aa26.75■■□□□ 1.87
CXCL16-203ENST00000574412 BCORQ6W2J9 1755 aa26.74■■□□□ 1.87
CXCL16-203ENST00000574412 NEXNQ0ZGT2 675 aa26.74■■□□□ 1.87
CXCL16-203ENST00000574412 ZNF827Q17R98 1081 aa26.74■■□□□ 1.87
CXCL16-203ENST00000574412 ATP10DQ9P241 1426 aa26.74■■□□□ 1.87
CXCL16-203ENST00000574412 IGKV5-2P06315 115 aa26.73■■□□□ 1.87
CXCL16-203ENST00000574412 ANKRD36CQ5JPF3 1778 aa26.73■■□□□ 1.87
CXCL16-203ENST00000574412 MEIS3Q99687 375 aa26.73■■□□□ 1.87
CXCL16-203ENST00000574412 ZBTB7BO15156 539 aaPredicted RBP26.72■■□□□ 1.87
CXCL16-203ENST00000574412 CAMTA2O94983 1202 aa26.72■■□□□ 1.87
CXCL16-203ENST00000574412 LINS1Q8NG48 757 aa26.72■■□□□ 1.87
CXCL16-203ENST00000574412 ARHGEF1Q92888 912 aaKnown RBP26.71■■□□□ 1.87
CXCL16-203ENST00000574412 SRP68Q9UHB9 627 aaKnown RBP26.71■■□□□ 1.87
CXCL16-203ENST00000574412 SCN7AQ01118 1682 aa26.71■■□□□ 1.87
CXCL16-203ENST00000574412 A0A087WZG4 1122 aa26.7■■□□□ 1.87
CXCL16-203ENST00000574412 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.7■■□□□ 1.87
CXCL16-203ENST00000574412 GIGYF2Q6Y7W6 1299 aaKnown RBP26.7■■□□□ 1.87
CXCL16-203ENST00000574412 C1orf115Q9H7X2 142 aa26.7■■□□□ 1.87
CXCL16-203ENST00000574412 NEURL1BA8MQ27 555 aa26.7■■□□□ 1.86
CXCL16-203ENST00000574412 GPTP24298 496 aa26.7■■□□□ 1.86
CXCL16-203ENST00000574412 AAMPQ13685 434 aa26.7■■□□□ 1.86
CXCL16-203ENST00000574412 TRAPPC3LQ5T215 181 aa26.7■■□□□ 1.86
CXCL16-203ENST00000574412 CCDC125Q86Z20 511 aa26.7■■□□□ 1.86
CXCL16-203ENST00000574412 AKT1S1Q96B36 256 aa26.7■■□□□ 1.86
CXCL16-203ENST00000574412 TFCP2L1Q9NZI6 479 aa26.7■■□□□ 1.86
CXCL16-203ENST00000574412 ERVV-1B6SEH8 477 aa26.69■■□□□ 1.86
CXCL16-203ENST00000574412 TCIRG1Q13488 830 aa26.68■■□□□ 1.86
CXCL16-203ENST00000574412 ANO8Q9HCE9 1232 aaPredicted RBP26.68■■□□□ 1.86
CXCL16-203ENST00000574412 ZBTB40Q9NUA8 1239 aa26.68■■□□□ 1.86
CXCL16-203ENST00000574412 ALDH1L1O75891 902 aa26.67■■□□□ 1.86
CXCL16-203ENST00000574412 RFC4P35249 363 aa26.67■■□□□ 1.86
CXCL16-203ENST00000574412 USPL1Q5W0Q7 1092 aa26.67■■□□□ 1.86
CXCL16-203ENST00000574412 UPF1Q92900 1129 aaKnown RBP eCLIP26.66■■□□□ 1.86
CXCL16-203ENST00000574412 USP44Q9H0E7 712 aa26.66■■□□□ 1.86
CXCL16-203ENST00000574412 ZPR1O75312 459 aa26.66■■□□□ 1.86
CXCL16-203ENST00000574412 ILDR2Q71H61 639 aa26.66■■□□□ 1.86
CXCL16-203ENST00000574412 JARID2Q92833 1246 aaPredicted RBP26.66■■□□□ 1.86
CXCL16-203ENST00000574412 NARFQ9UHQ1 456 aa26.66■■□□□ 1.86
CXCL16-203ENST00000574412 HMGB2P26583 209 aaKnown RBP26.65■■□□□ 1.86
CXCL16-203ENST00000574412 SSFA2P28290 1259 aa26.65■■□□□ 1.86
CXCL16-203ENST00000574412 GCKRQ14397 625 aa26.65■■□□□ 1.86
CXCL16-203ENST00000574412 C9orf78Q9NZ63 289 aaPredicted RBP26.65■■□□□ 1.86
CXCL16-203ENST00000574412 NBPF7P0C2Y1 421 aaPredicted RBP26.64■■□□□ 1.86
CXCL16-203ENST00000574412 ISCA1Q9BUE6 129 aa26.64■■□□□ 1.86
CXCL16-203ENST00000574412 ADRA2BP18089 450 aa26.63■■□□□ 1.85
CXCL16-203ENST00000574412 HSP90AB3PQ58FF7 597 aa26.63■■□□□ 1.85
CXCL16-203ENST00000574412 RTL5Q5HYW3 569 aaPredicted RBP26.63■■□□□ 1.85
CXCL16-203ENST00000574412 BCL2L12Q9HB09 334 aa26.63■■□□□ 1.85
CXCL16-203ENST00000574412 USP42Q9H9J4 1324 aaKnown RBP26.63■■□□□ 1.85
CXCL16-203ENST00000574412 MSH5O43196 834 aa26.63■■□□□ 1.85
CXCL16-203ENST00000574412 CWC25Q9NXE8 425 aaPredicted RBP26.63■■□□□ 1.85
CXCL16-203ENST00000574412 ZNF652Q9Y2D9 606 aa26.63■■□□□ 1.85
CXCL16-203ENST00000574412 GRM8O00222 908 aa26.62■■□□□ 1.85
CXCL16-203ENST00000574412 UBTFL1P0CB47 393 aaPredicted RBP26.62■■□□□ 1.85
CXCL16-203ENST00000574412 CHMP4BQ9H444 224 aaKnown RBP26.62■■□□□ 1.85
CXCL16-203ENST00000574412 PCDHB15Q9Y5E8 787 aa26.62■■□□□ 1.85
CXCL16-203ENST00000574412 GNAI3P08754 354 aa26.61■■□□□ 1.85
CXCL16-203ENST00000574412 BICDL1Q6ZP65 573 aa26.61■■□□□ 1.85
CXCL16-203ENST00000574412 PELP1Q8IZL8 1130 aaKnown RBP26.61■■□□□ 1.85
CXCL16-203ENST00000574412 STK32BQ9NY57 414 aa26.61■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms