RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ATXN7O15265 892 aaPredicted RBP9.43□□□□□ -0.9
CDC27-216ENST00000574304 BNIP3LO60238 219 aa9.43□□□□□ -0.9
CDC27-216ENST00000574304 CLP1Q92989 425 aaKnown RBP9.43□□□□□ -0.9
CDC27-216ENST00000574304 KLRG1Q96E93 195 aa9.43□□□□□ -0.9
CDC27-216ENST00000574304 ABHD17AQ96GS6 310 aa9.43□□□□□ -0.9
CDC27-216ENST00000574304 MBIPQ9NS73 344 aa9.43□□□□□ -0.9
CDC27-216ENST00000574304 NDFIP2Q9NV92 336 aa9.43□□□□□ -0.9
CDC27-216ENST00000574304 ATXN7L1Q9ULK2 861 aaPredicted RBP9.43□□□□□ -0.9
CDC27-216ENST00000574304 FKBP5Q13451 457 aaPredicted RBP9.42□□□□□ -0.9
CDC27-216ENST00000574304 MX2P20592 715 aa9.41□□□□□ -0.9
CDC27-216ENST00000574304 RTN1Q16799 776 aa9.41□□□□□ -0.9
CDC27-216ENST00000574304 SAMD5Q5TGI4 173 aa9.41□□□□□ -0.9
CDC27-216ENST00000574304 CXXC1Q9P0U4 656 aaPredicted RBP9.41□□□□□ -0.9
CDC27-216ENST00000574304 SLAIN2Q9P270 581 aa9.41□□□□□ -0.9
CDC27-216ENST00000574304 DCDC2BA2VCK2 349 aa9.4□□□□□ -0.9
CDC27-216ENST00000574304 KHNYNO15037 678 aaKnown RBP9.4□□□□□ -0.9
CDC27-216ENST00000574304 FAM157BP0CG42 384 aa9.4□□□□□ -0.9
CDC27-216ENST00000574304 SRSF11Q05519 484 aaKnown RBP9.4□□□□□ -0.9
CDC27-216ENST00000574304 HSH2DQ96JZ2 352 aa9.4□□□□□ -0.9
CDC27-216ENST00000574304 SUSD3Q96L08 255 aa9.4□□□□□ -0.9
CDC27-216ENST00000574304 ANKIB1Q9P2G1 1089 aa9.4□□□□□ -0.9
CDC27-216ENST00000574304 TMEM88BA6NKF7 163 aa9.39□□□□□ -0.91
CDC27-216ENST00000574304 ADAMTS2O95450 1211 aa9.39□□□□□ -0.91
CDC27-216ENST00000574304 MAPTP10636 758 aaKnown RBP9.39□□□□□ -0.91
CDC27-216ENST00000574304 FGFR3P22607 806 aa9.39□□□□□ -0.91
CDC27-216ENST00000574304 LORP23490 312 aaPredicted RBP9.39□□□□□ -0.91
CDC27-216ENST00000574304 TNP2Q05952 138 aa9.39□□□□□ -0.91
CDC27-216ENST00000574304 ZSCAN1Q8NBB4 408 aa9.39□□□□□ -0.91
CDC27-216ENST00000574304 QTRT2Q9H974 415 aaKnown RBP9.39□□□□□ -0.91
CDC27-216ENST00000574304 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.39□□□□□ -0.915e-7■■■■□ 21.2
CDC27-216ENST00000574304 NSFL1CQ9UNZ2 370 aaKnown RBP9.39□□□□□ -0.91
CDC27-216ENST00000574304 IGF1RP08069 1367 aa9.38□□□□□ -0.91
CDC27-216ENST00000574304 SLURP2P0DP57 97 aa9.38□□□□□ -0.91
CDC27-216ENST00000574304 HIF1AQ16665 826 aa9.38□□□□□ -0.91
CDC27-216ENST00000574304 ZNF280CQ8ND82 737 aa9.38□□□□□ -0.91
CDC27-216ENST00000574304 ATP2B4P23634 1241 aa9.37□□□□□ -0.91
CDC27-216ENST00000574304 EFSO43281 561 aa9.36□□□□□ -0.91
CDC27-216ENST00000574304 MAP2K3P46734 347 aa9.36□□□□□ -0.91
CDC27-216ENST00000574304 CTBSQ01459 385 aa9.36□□□□□ -0.91
CDC27-216ENST00000574304 MKNK1Q9BUB5 465 aa9.36□□□□□ -0.91
CDC27-216ENST00000574304 KLK14Q9P0G3 267 aa9.36□□□□□ -0.91
CDC27-216ENST00000574304 HCN2Q9UL51 889 aa9.36□□□□□ -0.91
CDC27-216ENST00000574304 BMP4P12644 408 aa9.35□□□□□ -0.91
CDC27-216ENST00000574304 CD33P20138 364 aa9.35□□□□□ -0.91
CDC27-216ENST00000574304 DGKZQ13574 1117 aa9.35□□□□□ -0.91
CDC27-216ENST00000574304 LAMC2Q13753 1193 aa9.35□□□□□ -0.91
CDC27-216ENST00000574304 COL26A1Q96A83 441 aa9.35□□□□□ -0.91
CDC27-216ENST00000574304 MYO19Q96H55 970 aa9.35□□□□□ -0.91
CDC27-216ENST00000574304 CEP63Q96MT8 703 aa9.35□□□□□ -0.91
CDC27-216ENST00000574304 CARNS1A5YM72 827 aa9.34□□□□□ -0.91
CDC27-216ENST00000574304 C2CD2LO14523 706 aa9.34□□□□□ -0.91
CDC27-216ENST00000574304 PTCD1O75127 700 aaKnown RBP9.34□□□□□ -0.91
CDC27-216ENST00000574304 STRN4Q9NRL3 753 aa9.34□□□□□ -0.91
CDC27-216ENST00000574304 MARK1Q9P0L2 795 aa9.34□□□□□ -0.91
CDC27-216ENST00000574304 BCS1LQ9Y276 419 aa9.34□□□□□ -0.91
CDC27-216ENST00000574304 USTQ9Y2C2 406 aa9.34□□□□□ -0.91
CDC27-216ENST00000574304 TGFBR3LH3BV60 316 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 TYRO3Q06418 890 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 C11orf91Q3C1V1 193 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 FAM182BQ5T319 152 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 IER5Q5VY09 327 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 ZNF385CQ66K41 422 aaPredicted RBP9.33□□□□□ -0.92
CDC27-216ENST00000574304 CAPN12Q6ZSI9 719 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 BTLAQ7Z6A9 289 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 WHAMMQ8TF30 809 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 BRD7Q9NPI1 651 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 LRFN2Q9ULH4 789 aa9.33□□□□□ -0.92
CDC27-216ENST00000574304 SFSWAPQ12872 951 aaKnown RBP9.32□□□□□ -0.92
CDC27-216ENST00000574304 COX20Q5RI15 118 aa9.32□□□□□ -0.92
CDC27-216ENST00000574304 LYPD4Q6UWN0 246 aa9.32□□□□□ -0.92
CDC27-216ENST00000574304 ACDQ96AP0 544 aa9.32□□□□□ -0.92
CDC27-216ENST00000574304 SSFA2P28290 1259 aa9.31□□□□□ -0.92
CDC27-216ENST00000574304 NAA30Q147X3 362 aaPredicted RBP9.31□□□□□ -0.92
CDC27-216ENST00000574304 C16orf46Q6P387 395 aa9.31□□□□□ -0.92
CDC27-216ENST00000574304 SVOPQ8N4V2 548 aa9.31□□□□□ -0.92
CDC27-216ENST00000574304 OXCT2Q9BYC2 517 aaPredicted RBP9.31□□□□□ -0.92
CDC27-216ENST00000574304 SAP130Q9H0E3 1048 aa9.31□□□□□ -0.92
CDC27-216ENST00000574304 STK17AQ9UEE5 414 aa9.31□□□□□ -0.92
CDC27-216ENST00000574304 CELA2BP08218 269 aaPredicted RBP9.3□□□□□ -0.92
CDC27-216ENST00000574304 RETREG2Q8NC44 543 aa9.3□□□□□ -0.92
CDC27-216ENST00000574304 IFT43Q96FT9 208 aa9.3□□□□□ -0.92
CDC27-216ENST00000574304 DMGDHQ9UI17 866 aaKnown RBP9.3□□□□□ -0.92
CDC27-216ENST00000574304 KCNQ4P56696 695 aa9.29□□□□□ -0.92
CDC27-216ENST00000574304 GRIN2CQ14957 1233 aa9.29□□□□□ -0.92
CDC27-216ENST00000574304 KCNH4Q9UQ05 1017 aa9.29□□□□□ -0.92
CDC27-216ENST00000574304 FAM181BA6NEQ2 426 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 MICAL2O94851 1124 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 ARAFP10398 606 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 BCRP11274 1271 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 SCNN1AP37088 669 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 IDH3AP50213 366 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 MAP3K10Q02779 954 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 SEPT3Q9UH03 358 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 GDF2Q9UK05 429 aaPredicted RBP9.28□□□□□ -0.92
CDC27-216ENST00000574304 PRR12Q9ULL5 1215 aa9.28□□□□□ -0.92
CDC27-216ENST00000574304 GOLGA6L1Q8N7Z2 621 aa9.27□□□□□ -0.93
CDC27-216ENST00000574304 GGA1Q9UJY5 639 aa9.27□□□□□ -0.93
CDC27-216ENST00000574304 TNFRSF10BO14763 440 aa9.26□□□□□ -0.93
CDC27-216ENST00000574304 BRD2P25440 801 aaKnown RBP9.26□□□□□ -0.93
CDC27-216ENST00000574304 INPP5BP32019 993 aa9.26□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms