RNA–Protein interactions for RNA: ENST00000574109.5

NDE1-209, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 843 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-209ENST00000574109 MTFR1LQ9H019 292 aa17.33■□□□□ 0.36
NDE1-209ENST00000574109 CAMTA2O94983 1202 aa17.32■□□□□ 0.36
NDE1-209ENST00000574109 SLC4A2P04920 1241 aa17.32■□□□□ 0.36
NDE1-209ENST00000574109 PIP4K2AP48426 406 aaPredicted RBP17.32■□□□□ 0.36
NDE1-209ENST00000574109 RARSP54136 660 aaKnown RBP17.32■□□□□ 0.36
NDE1-209ENST00000574109 FLIIQ13045 1269 aa17.32■□□□□ 0.36
NDE1-209ENST00000574109 HSP90AB3PQ58FF7 597 aa17.32■□□□□ 0.36
NDE1-209ENST00000574109 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
NDE1-209ENST00000574109 LAMB2P55268 1798 aa17.32■□□□□ 0.36
NDE1-209ENST00000574109 ANXA1P04083 346 aa17.31■□□□□ 0.36
NDE1-209ENST00000574109 COPS6Q7L5N1 327 aa17.31■□□□□ 0.36
NDE1-209ENST00000574109 NLGN1Q8N2Q7 840 aa17.31■□□□□ 0.36
NDE1-209ENST00000574109 PLBD2Q8NHP8 589 aa17.31■□□□□ 0.36
NDE1-209ENST00000574109 SSH1Q8WYL5 1049 aa17.31■□□□□ 0.36
NDE1-209ENST00000574109 CARMIL3Q8ND23 1372 aa17.3■□□□□ 0.36
NDE1-209ENST00000574109 IBTKQ9P2D0 1353 aaPredicted RBP17.3■□□□□ 0.36
NDE1-209ENST00000574109 PSDA5PKW4 1024 aaPredicted RBP17.3■□□□□ 0.36
NDE1-209ENST00000574109 GYS1P13807 737 aa17.3■□□□□ 0.36
NDE1-209ENST00000574109 KIF13BQ9NQT8 1826 aa17.3■□□□□ 0.36
NDE1-209ENST00000574109 FKBP5Q13451 457 aaPredicted RBP17.29■□□□□ 0.36
NDE1-209ENST00000574109 USPL1Q5W0Q7 1092 aa17.29■□□□□ 0.36
NDE1-209ENST00000574109 GIGYF2Q6Y7W6 1299 aaKnown RBP17.29■□□□□ 0.36
NDE1-209ENST00000574109 ANKRD13DQ6ZTN6 518 aa17.29■□□□□ 0.36
NDE1-209ENST00000574109 MRPL50Q8N5N7 158 aaKnown RBP17.29■□□□□ 0.36
NDE1-209ENST00000574109 ARXQ96QS3 562 aa17.29■□□□□ 0.36
NDE1-209ENST00000574109 TBC1D2BQ9UPU7 963 aa17.29■□□□□ 0.36
NDE1-209ENST00000574109 AIMP1Q12904 312 aaKnown RBP17.28■□□□□ 0.36
NDE1-209ENST00000574109 TTLL7Q6ZT98 887 aa17.28■□□□□ 0.36
NDE1-209ENST00000574109 MYH3P11055 1940 aa17.27■□□□□ 0.36
NDE1-209ENST00000574109 RNF123Q5XPI4 1314 aa17.27■□□□□ 0.36
NDE1-209ENST00000574109 IPO8O15397 1037 aaKnown RBP17.27■□□□□ 0.36
NDE1-209ENST00000574109 POLD1P28340 1107 aa17.27■□□□□ 0.36
NDE1-209ENST00000574109 NEXNQ0ZGT2 675 aa17.27■□□□□ 0.36
NDE1-209ENST00000574109 KSR2Q6VAB6 950 aa17.27■□□□□ 0.36
NDE1-209ENST00000574109 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
NDE1-209ENST00000574109 ZBTB3Q9H5J0 574 aa17.27■□□□□ 0.36
NDE1-209ENST00000574109 PHAXQ9H814 394 aaKnown RBP17.27■□□□□ 0.36
NDE1-209ENST00000574109 SRP68Q9UHB9 627 aaKnown RBP17.27■□□□□ 0.36
NDE1-209ENST00000574109 RCAN3Q9UKA8 241 aa17.27■□□□□ 0.36
NDE1-209ENST00000574109 ADCY9O60503 1353 aa17.27■□□□□ 0.35
NDE1-209ENST00000574109 TCERG1O14776 1098 aaKnown RBP17.26■□□□□ 0.35
NDE1-209ENST00000574109 ARHGAP45Q92619 1136 aa17.26■□□□□ 0.35
NDE1-209ENST00000574109 BCL2L13Q9BXK5 485 aa17.26■□□□□ 0.35
NDE1-209ENST00000574109 API5Q9BZZ5 524 aaKnown RBP17.26■□□□□ 0.35
NDE1-209ENST00000574109 PARP10Q53GL7 1025 aa17.25■□□□□ 0.35
NDE1-209ENST00000574109 SPON1Q9HCB6 807 aa17.25■□□□□ 0.35
NDE1-209ENST00000574109 RIC1Q4ADV7 1423 aa17.24■□□□□ 0.35
NDE1-209ENST00000574109 PI4KAP2A4QPH2 592 aa17.24■□□□□ 0.35
NDE1-209ENST00000574109 FKBP8Q14318 412 aa17.24■□□□□ 0.35
NDE1-209ENST00000574109 SMIM5Q71RC9 77 aa17.24■□□□□ 0.35
NDE1-209ENST00000574109 PI4KAP1Q8N8J0 262 aa17.24■□□□□ 0.35
NDE1-209ENST00000574109 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.24■□□□□ 0.35
NDE1-209ENST00000574109 DNAAF4Q8WXU2 420 aa17.24■□□□□ 0.35
NDE1-209ENST00000574109 SETDB2Q96T68 719 aa17.24■□□□□ 0.35
NDE1-209ENST00000574109 BCL2L12Q9HB09 334 aa17.24■□□□□ 0.35
NDE1-209ENST00000574109 DLEC1Q9Y238 1755 aa17.23■□□□□ 0.35
NDE1-209ENST00000574109 ZBTB7AO95365 584 aa17.23■□□□□ 0.35
NDE1-209ENST00000574109 TCIRG1Q13488 830 aa17.23■□□□□ 0.35
NDE1-209ENST00000574109 G2E3Q7L622 706 aa17.23■□□□□ 0.35
NDE1-209ENST00000574109 METTL22Q9BUU2 404 aaPredicted RBP17.23■□□□□ 0.35
NDE1-209ENST00000574109 PDGFDQ9GZP0 370 aaPredicted RBP17.23■□□□□ 0.35
NDE1-209ENST00000574109 NYXQ9GZU5 481 aa17.23■□□□□ 0.35
NDE1-209ENST00000574109 MAP3K2Q9Y2U5 619 aa17.23■□□□□ 0.35
NDE1-209ENST00000574109 MMP10P09238 476 aa17.22■□□□□ 0.35
NDE1-209ENST00000574109 MS4A1P11836 297 aa17.22■□□□□ 0.35
NDE1-209ENST00000574109 TRIM28Q13263 835 aaKnown RBP17.22■□□□□ 0.35
NDE1-209ENST00000574109 HLFQ16534 295 aa17.22■□□□□ 0.35
NDE1-209ENST00000574109 NIP7Q9Y221 180 aaKnown RBP eCLIP17.22■□□□□ 0.35
NDE1-209ENST00000574109 PARP3Q9Y6F1 533 aa17.22■□□□□ 0.35
NDE1-209ENST00000574109 ANKRD31Q8N7Z5 1873 aa17.22■□□□□ 0.35
NDE1-209ENST00000574109 DDX60Q8IY21 1712 aaKnown RBP17.21■□□□□ 0.35
NDE1-209ENST00000574109 NFIXQ14938 502 aa17.21■□□□□ 0.35
NDE1-209ENST00000574109 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
NDE1-209ENST00000574109 TBC1D9BQ66K14 1250 aa17.21■□□□□ 0.35
NDE1-209ENST00000574109 MSL1Q68DK7 614 aa17.21■□□□□ 0.35
NDE1-209ENST00000574109 PPP1R42Q7Z4L9 355 aa17.21■□□□□ 0.35
NDE1-209ENST00000574109 ZNF34Q8IZ26 560 aa17.21■□□□□ 0.35
NDE1-209ENST00000574109 C10orf71Q711Q0 1435 aa17.21■□□□□ 0.34
NDE1-209ENST00000574109 HSP90B1P14625 803 aaKnown RBP17.2■□□□□ 0.34
NDE1-209ENST00000574109 TM4SF1P30408 202 aa17.2■□□□□ 0.34
NDE1-209ENST00000574109 ATF7IPQ6VMQ6 1270 aa17.2■□□□□ 0.34
NDE1-209ENST00000574109 CCDC191Q8NCU4 936 aa17.2■□□□□ 0.34
NDE1-209ENST00000574109 LINS1Q8NG48 757 aa17.2■□□□□ 0.34
NDE1-209ENST00000574109 ISCA1Q9BUE6 129 aa17.2■□□□□ 0.34
NDE1-209ENST00000574109 NOB1Q9ULX3 412 aaKnown RBP17.2■□□□□ 0.34
NDE1-209ENST00000574109 ABCC4O15439 1325 aa17.2■□□□□ 0.34
NDE1-209ENST00000574109 POLRMTO00411 1230 aaKnown RBP17.19■□□□□ 0.34
NDE1-209ENST00000574109 BCAR3O75815 825 aa17.19■□□□□ 0.34
NDE1-209ENST00000574109 CNBD1Q8NA66 436 aa17.19■□□□□ 0.34
NDE1-209ENST00000574109 MYD88Q99836 296 aa17.19■□□□□ 0.34
NDE1-209ENST00000574109 SGIP1Q9BQI5 828 aa17.19■□□□□ 0.34
NDE1-209ENST00000574109 UBN2Q6ZU65 1347 aa17.19■□□□□ 0.34
NDE1-209ENST00000574109 NPHP1O15259 732 aa17.18■□□□□ 0.34
NDE1-209ENST00000574109 ALDH1L1O75891 902 aa17.18■□□□□ 0.34
NDE1-209ENST00000574109 CCT4P50991 539 aaKnown RBP17.18■□□□□ 0.34
NDE1-209ENST00000574109 ST5P78524 1137 aa17.18■□□□□ 0.34
NDE1-209ENST00000574109 NBPF5PQ86XG9 351 aaPredicted RBP17.18■□□□□ 0.34
NDE1-209ENST00000574109 FTSJ3Q8IY81 847 aaKnown RBP17.18■□□□□ 0.34
NDE1-209ENST00000574109 FRAT1Q92837 279 aaPredicted RBP17.18■□□□□ 0.34
NDE1-209ENST00000574109 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 351 ms