RNA–Protein interactions for RNA: ENST00000573876.1

NPLOC4-214, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4 BASIC

Gene NPLOC4, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-214ENST00000573876 ERVV-1B6SEH8 477 aa16.5■□□□□ 0.23
NPLOC4-214ENST00000573876 RGL2O15211 777 aa16.5■□□□□ 0.23
NPLOC4-214ENST00000573876 CAMTA2O94983 1202 aa16.5■□□□□ 0.23
NPLOC4-214ENST00000573876 TTLL7Q6ZT98 887 aa16.5■□□□□ 0.23
NPLOC4-214ENST00000573876 LRP10Q7Z4F1 713 aa16.5■□□□□ 0.23
NPLOC4-214ENST00000573876 BCAR3O75815 825 aa16.49■□□□□ 0.23
NPLOC4-214ENST00000573876 DDX58O95786 925 aaKnown RBP16.49■□□□□ 0.23
NPLOC4-214ENST00000573876 C4AP0C0L4 1744 aa16.49■□□□□ 0.23
NPLOC4-214ENST00000573876 FKBP8Q14318 412 aa16.49■□□□□ 0.23
NPLOC4-214ENST00000573876 ALDH1L2Q3SY69 923 aa16.49■□□□□ 0.23
NPLOC4-214ENST00000573876 CLEC4GQ6UXB4 293 aa16.49■□□□□ 0.23
NPLOC4-214ENST00000573876 BCL2L13Q9BXK5 485 aa16.49■□□□□ 0.23
NPLOC4-214ENST00000573876 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
NPLOC4-214ENST00000573876 MRPL50Q8N5N7 158 aaKnown RBP16.48■□□□□ 0.23
NPLOC4-214ENST00000573876 ZBTB3Q9H5J0 574 aa16.48■□□□□ 0.23
NPLOC4-214ENST00000573876 SMC4Q9NTJ3 1288 aa16.48■□□□□ 0.23
NPLOC4-214ENST00000573876 CACNA1FO60840 1977 aa16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 MMP10P09238 476 aa16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 HSP90AB3PQ58FF7 597 aa16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 ANKRD13DQ6ZTN6 518 aa16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 G2E3Q7L622 706 aa16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 PHAXQ9H814 394 aaKnown RBP16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 BCL2L12Q9HB09 334 aa16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 PPP1R1BQ9UD71 204 aaPredicted RBP16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 PARP3Q9Y6F1 533 aa16.47■□□□□ 0.23
NPLOC4-214ENST00000573876 SRCAPQ6ZRS2 3230 aa16.46■□□□□ 0.23
NPLOC4-214ENST00000573876 HLFQ16534 295 aa16.46■□□□□ 0.23
NPLOC4-214ENST00000573876 GIGYF2Q6Y7W6 1299 aaKnown RBP16.46■□□□□ 0.23
NPLOC4-214ENST00000573876 BICDL1Q6ZP65 573 aa16.46■□□□□ 0.23
NPLOC4-214ENST00000573876 RIC3Q7Z5B4 369 aa16.46■□□□□ 0.23
NPLOC4-214ENST00000573876 PLBD2Q8NHP8 589 aa16.46■□□□□ 0.23
NPLOC4-214ENST00000573876 SETDB2Q96T68 719 aa16.46■□□□□ 0.23
NPLOC4-214ENST00000573876 CENPBP07199 599 aaPredicted RBP16.45■□□□□ 0.22
NPLOC4-214ENST00000573876 FLIIQ13045 1269 aa16.45■□□□□ 0.22
NPLOC4-214ENST00000573876 NFIXQ14938 502 aa16.45■□□□□ 0.22
NPLOC4-214ENST00000573876 SCN7AQ01118 1682 aa16.44■□□□□ 0.22
NPLOC4-214ENST00000573876 TM4SF1P30408 202 aa16.44■□□□□ 0.22
NPLOC4-214ENST00000573876 PTGER2P43116 358 aa16.44■□□□□ 0.22
NPLOC4-214ENST00000573876 FKBP5Q13451 457 aaPredicted RBP16.44■□□□□ 0.22
NPLOC4-214ENST00000573876 TBC1D9BQ66K14 1250 aa16.44■□□□□ 0.22
NPLOC4-214ENST00000573876 FRAT1Q92837 279 aaPredicted RBP16.44■□□□□ 0.22
NPLOC4-214ENST00000573876 NOB1Q9ULX3 412 aaKnown RBP16.44■□□□□ 0.22
NPLOC4-214ENST00000573876 NIP7Q9Y221 180 aaKnown RBP eCLIP16.44■□□□□ 0.22
NPLOC4-214ENST00000573876 NPHP1O15259 732 aa16.43■□□□□ 0.22
NPLOC4-214ENST00000573876 KSR2Q6VAB6 950 aa16.43■□□□□ 0.22
NPLOC4-214ENST00000573876 SGIP1Q9BQI5 828 aa16.43■□□□□ 0.22
NPLOC4-214ENST00000573876 CARMIL3Q8ND23 1372 aa16.42■□□□□ 0.22
NPLOC4-214ENST00000573876 BCORQ6W2J9 1755 aa16.42■□□□□ 0.22
NPLOC4-214ENST00000573876 BRPF1P55201 1214 aaPredicted RBP16.42■□□□□ 0.22
NPLOC4-214ENST00000573876 TCIRG1Q13488 830 aa16.42■□□□□ 0.22
NPLOC4-214ENST00000573876 PI4KAP2A4QPH2 592 aa16.41■□□□□ 0.22
NPLOC4-214ENST00000573876 POLRMTO00411 1230 aaKnown RBP16.41■□□□□ 0.22
NPLOC4-214ENST00000573876 SERPINB2P05120 415 aa16.41■□□□□ 0.22
NPLOC4-214ENST00000573876 GPTP24298 496 aa16.41■□□□□ 0.22
NPLOC4-214ENST00000573876 DDR1Q08345 913 aa16.41■□□□□ 0.22
NPLOC4-214ENST00000573876 NEXNQ0ZGT2 675 aa16.41■□□□□ 0.22
NPLOC4-214ENST00000573876 PARP10Q53GL7 1025 aa16.41■□□□□ 0.22
NPLOC4-214ENST00000573876 PI4KAP1Q8N8J0 262 aa16.41■□□□□ 0.22
NPLOC4-214ENST00000573876 COL24A1Q17RW2 1714 aa16.4■□□□□ 0.22
NPLOC4-214ENST00000573876 ATP10DQ9P241 1426 aa16.4■□□□□ 0.22
NPLOC4-214ENST00000573876 IPO8O15397 1037 aaKnown RBP16.4■□□□□ 0.22
NPLOC4-214ENST00000573876 NBPF5PQ86XG9 351 aaPredicted RBP16.4■□□□□ 0.22
NPLOC4-214ENST00000573876 KLHL34Q8N239 644 aa16.4■□□□□ 0.22
NPLOC4-214ENST00000573876 NYXQ9GZU5 481 aa16.4■□□□□ 0.22
NPLOC4-214ENST00000573876 MAP3K2Q9Y2U5 619 aa16.4■□□□□ 0.22
NPLOC4-214ENST00000573876 NUP98P52948 1817 aa16.4■□□□□ 0.22
NPLOC4-214ENST00000573876 PLIN1O60240 522 aa16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 GTF2E1P29083 439 aaPredicted RBP16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 TPTE2Q6XPS3 522 aa16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 PPP1R42Q7Z4L9 355 aa16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 ZNF34Q8IZ26 560 aa16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 DNAAF4Q8WXU2 420 aa16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 MYD88Q99836 296 aa16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 METTL22Q9BUU2 404 aaPredicted RBP16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 SUPT16HQ9Y5B9 1047 aaKnown RBP16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 PTPRCP08575 1304 aa16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 KIF16BQ96L93 1317 aa16.39■□□□□ 0.21
NPLOC4-214ENST00000573876 LRP5O75197 1615 aa16.38■□□□□ 0.21
NPLOC4-214ENST00000573876 FAM177BA6PVY3 158 aa16.38■□□□□ 0.21
NPLOC4-214ENST00000573876 ST5P78524 1137 aa16.38■□□□□ 0.21
NPLOC4-214ENST00000573876 CNBD1Q8NA66 436 aa16.38■□□□□ 0.21
NPLOC4-214ENST00000573876 F6X3S4 739 aa16.37■□□□□ 0.21
NPLOC4-214ENST00000573876 ATP5J2-PTCD1G3V325 749 aa16.37■□□□□ 0.21
NPLOC4-214ENST00000573876 TRIM28Q13263 835 aaKnown RBP16.37■□□□□ 0.21
NPLOC4-214ENST00000573876 ZKSCAN2Q63HK3 967 aa16.37■□□□□ 0.21
NPLOC4-214ENST00000573876 NLRP10Q86W26 655 aa16.37■□□□□ 0.21
NPLOC4-214ENST00000573876 ARHGAP45Q92619 1136 aa16.37■□□□□ 0.21
NPLOC4-214ENST00000573876 ISCA1Q9BUE6 129 aa16.37■□□□□ 0.21
NPLOC4-214ENST00000573876 ADCY9O60503 1353 aa16.37■□□□□ 0.21
NPLOC4-214ENST00000573876 ATF7IPQ6VMQ6 1270 aa16.36■□□□□ 0.21
NPLOC4-214ENST00000573876 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.36■□□□□ 0.21
NPLOC4-214ENST00000573876 UTP14AQ9BVJ6 771 aaKnown RBP16.36■□□□□ 0.21
NPLOC4-214ENST00000573876 API5Q9BZZ5 524 aaKnown RBP16.36■□□□□ 0.21
NPLOC4-214ENST00000573876 CD2APQ9Y5K6 639 aa16.36■□□□□ 0.21
NPLOC4-214ENST00000573876 SUSD4Q5VX71 490 aa16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 PRR5LQ6MZQ0 368 aa16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 SLC4A10Q6U841 1118 aa16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 CCDC191Q8NCU4 936 aa16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 CLUAP1Q96AJ1 413 aa16.35■□□□□ 0.21
NPLOC4-214ENST00000573876 CWC25Q9NXE8 425 aaPredicted RBP16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms