RNA–Protein interactions for RNA: ENST00000573857.5

TVP23A-208, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 1,269 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-208ENST00000573857 PNISRQ8TF01 805 aaKnown RBP18.94■□□□□ 0.62
TVP23A-208ENST00000573857 RRAGCQ9HB90 399 aa18.94■□□□□ 0.62
TVP23A-208ENST00000573857 C21orf2O43822 256 aa18.93■□□□□ 0.62
TVP23A-208ENST00000573857 SRGNP10124 158 aa18.93■□□□□ 0.62
TVP23A-208ENST00000573857 STYK1Q6J9G0 422 aa18.93■□□□□ 0.62
TVP23A-208ENST00000573857 NBPF5PQ86XG9 351 aaPredicted RBP18.93■□□□□ 0.62
TVP23A-208ENST00000573857 PNNQ9H307 717 aaKnown RBP18.92■□□□□ 0.62
TVP23A-208ENST00000573857 ZNF219Q9P2Y4 722 aaPredicted RBP18.92■□□□□ 0.62
TVP23A-208ENST00000573857 TNRC6CQ9HCJ0 1690 aaKnown RBP18.92■□□□□ 0.62
TVP23A-208ENST00000573857 GLTPD2A6NH11 291 aa18.91■□□□□ 0.62
TVP23A-208ENST00000573857 FSTL1Q12841 308 aa18.91■□□□□ 0.62
TVP23A-208ENST00000573857 CNKSR1Q969H4 720 aa18.91■□□□□ 0.62
TVP23A-208ENST00000573857 MASTLQ96GX5 879 aa18.91■□□□□ 0.62
TVP23A-208ENST00000573857 THUMPD2Q9BTF0 503 aaKnown RBP18.91■□□□□ 0.62
TVP23A-208ENST00000573857 NIP7Q9Y221 180 aaKnown RBP eCLIP18.91■□□□□ 0.62
TVP23A-208ENST00000573857 MAPK8IP3Q9UPT6 1336 aa18.91■□□□□ 0.62
TVP23A-208ENST00000573857 DLG5Q8TDM6 1919 aa18.9■□□□□ 0.62
TVP23A-208ENST00000573857 EIF4A1P60842 406 aaKnown RBP18.9■□□□□ 0.62
TVP23A-208ENST00000573857 PRPF40BQ6NWY9 871 aaKnown RBP18.9■□□□□ 0.62
TVP23A-208ENST00000573857 LAMB4A4D0S4 1761 aa18.9■□□□□ 0.62
TVP23A-208ENST00000573857 KDM3BQ7LBC6 1761 aa18.9■□□□□ 0.62
TVP23A-208ENST00000573857 RALBP1Q15311 655 aa18.89■□□□□ 0.61
TVP23A-208ENST00000573857 LTBP3Q9NS15 1303 aa18.89■□□□□ 0.61
TVP23A-208ENST00000573857 TIAM2Q8IVF5 1701 aa18.88■□□□□ 0.61
TVP23A-208ENST00000573857 HLFQ16534 295 aa18.88■□□□□ 0.61
TVP23A-208ENST00000573857 TPTE2Q6XPS3 522 aa18.88■□□□□ 0.61
TVP23A-208ENST00000573857 KLRG2A4D1S0 409 aaPredicted RBP18.87■□□□□ 0.61
TVP23A-208ENST00000573857 SOGA3Q5TF21 947 aa18.87■□□□□ 0.61
TVP23A-208ENST00000573857 DNAJC5GQ8N7S2 189 aa18.87■□□□□ 0.61
TVP23A-208ENST00000573857 TAOK3Q9H2K8 898 aa18.87■□□□□ 0.61
TVP23A-208ENST00000573857 FER1L6Q2WGJ9 1857 aa18.86■□□□□ 0.61
TVP23A-208ENST00000573857 SLX4Q8IY92 1834 aa18.86■□□□□ 0.61
TVP23A-208ENST00000573857 VEGFAP15692 232 aaPredicted RBP18.86■□□□□ 0.61
TVP23A-208ENST00000573857 ERFEQ4G0M1 354 aa18.86■□□□□ 0.61
TVP23A-208ENST00000573857 NGEFQ8N5V2 710 aa18.86■□□□□ 0.61
TVP23A-208ENST00000573857 FAM177BA6PVY3 158 aa18.85■□□□□ 0.61
TVP23A-208ENST00000573857 ERVV-1B6SEH8 477 aa18.85■□□□□ 0.61
TVP23A-208ENST00000573857 NPR1P16066 1061 aa18.85■□□□□ 0.61
TVP23A-208ENST00000573857 SMC1BQ8NDV3 1235 aa18.85■□□□□ 0.61
TVP23A-208ENST00000573857 C7orf43Q8WVR3 580 aa18.85■□□□□ 0.61
TVP23A-208ENST00000573857 RRP7AQ9Y3A4 280 aaKnown RBP18.85■□□□□ 0.61
TVP23A-208ENST00000573857 ARFGEF2Q9Y6D5 1785 aa18.84■□□□□ 0.61
TVP23A-208ENST00000573857 MAP3K15Q6ZN16 1313 aa18.84■□□□□ 0.61
TVP23A-208ENST00000573857 DPY19L2Q6NUT2 758 aa18.84■□□□□ 0.61
TVP23A-208ENST00000573857 PCNTO95613 3336 aa18.84■□□□□ 0.61
TVP23A-208ENST00000573857 CCDC88AQ3V6T2 1871 aa18.84■□□□□ 0.61
TVP23A-208ENST00000573857 MYL6BP14649 208 aa18.83■□□□□ 0.6
TVP23A-208ENST00000573857 RIPK4P57078 832 aa18.83■□□□□ 0.6
TVP23A-208ENST00000573857 KIF6Q6ZMV9 814 aa18.83■□□□□ 0.6
TVP23A-208ENST00000573857 TTLL7Q6ZT98 887 aa18.83■□□□□ 0.6
TVP23A-208ENST00000573857 TSPYL4Q9UJ04 414 aa18.83■□□□□ 0.6
TVP23A-208ENST00000573857 MYBBP1AQ9BQG0 1328 aaKnown RBP18.82■□□□□ 0.6
TVP23A-208ENST00000573857 HTRA3P83110 453 aa18.82■□□□□ 0.6
TVP23A-208ENST00000573857 DDX10Q13206 875 aaKnown RBP18.82■□□□□ 0.6
TVP23A-208ENST00000573857 CCDC93Q567U6 631 aa18.82■□□□□ 0.6
TVP23A-208ENST00000573857 NYXQ9GZU5 481 aa18.82■□□□□ 0.6
TVP23A-208ENST00000573857 WDR90Q96KV7 1748 aa18.82■□□□□ 0.6
TVP23A-208ENST00000573857 ABCC12Q96J65 1359 aa18.81■□□□□ 0.6
TVP23A-208ENST00000573857 ERBB4Q15303 1308 aa18.81■□□□□ 0.6
TVP23A-208ENST00000573857 POTECB2RU33 542 aa18.81■□□□□ 0.6
TVP23A-208ENST00000573857 GTF2E1P29083 439 aaPredicted RBP18.81■□□□□ 0.6
TVP23A-208ENST00000573857 TMPOP42166 694 aaKnown RBP18.81■□□□□ 0.6
TVP23A-208ENST00000573857 CACNA1SQ13698 1873 aa18.81■□□□□ 0.6
TVP23A-208ENST00000573857 DICER1Q9UPY3 1922 aaKnown RBP18.8■□□□□ 0.6
TVP23A-208ENST00000573857 LMOD3Q0VAK6 560 aa18.8■□□□□ 0.6
TVP23A-208ENST00000573857 ZBTB3Q9H5J0 574 aa18.8■□□□□ 0.6
TVP23A-208ENST00000573857 BABAM1Q9NWV8 329 aa18.8■□□□□ 0.6
TVP23A-208ENST00000573857 IBTKQ9P2D0 1353 aaPredicted RBP18.8■□□□□ 0.6
TVP23A-208ENST00000573857 UBN2Q6ZU65 1347 aa18.79■□□□□ 0.6
TVP23A-208ENST00000573857 CRY2Q49AN0 593 aa18.79■□□□□ 0.6
TVP23A-208ENST00000573857 NUTM1Q86Y26 1132 aa18.79■□□□□ 0.6
TVP23A-208ENST00000573857 GPTP24298 496 aa18.78■□□□□ 0.6
TVP23A-208ENST00000573857 ALDH1B1P30837 517 aa18.78■□□□□ 0.6
TVP23A-208ENST00000573857 FKBP4Q02790 459 aaKnown RBP eCLIP18.78■□□□□ 0.6
TVP23A-208ENST00000573857 PDIA6Q15084 440 aa18.78■□□□□ 0.6
TVP23A-208ENST00000573857 OLFM4Q6UX06 510 aa18.78■□□□□ 0.6
TVP23A-208ENST00000573857 LRP10Q7Z4F1 713 aa18.78■□□□□ 0.6
TVP23A-208ENST00000573857 RTKN2Q8IZC4 609 aa18.78■□□□□ 0.6
TVP23A-208ENST00000573857 KLRG1Q96E93 195 aa18.78■□□□□ 0.6
TVP23A-208ENST00000573857 DDNO94850 711 aaPredicted RBP18.77■□□□□ 0.6
TVP23A-208ENST00000573857 GIGYF2Q6Y7W6 1299 aaKnown RBP18.77■□□□□ 0.6
TVP23A-208ENST00000573857 ZNF277Q9NRM2 450 aaPredicted RBP18.77■□□□□ 0.6
TVP23A-208ENST00000573857 NUP98P52948 1817 aa18.77■□□□□ 0.59
TVP23A-208ENST00000573857 RIC1Q4ADV7 1423 aa18.76■□□□□ 0.59
TVP23A-208ENST00000573857 EIF2S2P20042 333 aaKnown RBP18.76■□□□□ 0.59
TVP23A-208ENST00000573857 SUSD4Q5VX71 490 aa18.76■□□□□ 0.59
TVP23A-208ENST00000573857 CCDC146Q8IYE0 955 aa18.76■□□□□ 0.59
TVP23A-208ENST00000573857 ZNF34Q8IZ26 560 aa18.76■□□□□ 0.59
TVP23A-208ENST00000573857 PROSER3Q2NL68 480 aa18.75■□□□□ 0.59
TVP23A-208ENST00000573857 IFFO2Q5TF58 517 aa18.75■□□□□ 0.59
TVP23A-208ENST00000573857 NTSR2O95665 410 aa18.74■□□□□ 0.59
TVP23A-208ENST00000573857 WDR43Q15061 677 aaKnown RBP eCLIP18.74■□□□□ 0.59
TVP23A-208ENST00000573857 NEUROD2Q15784 382 aa18.74■□□□□ 0.59
TVP23A-208ENST00000573857 SNED1Q8TER0 1413 aa18.74■□□□□ 0.59
TVP23A-208ENST00000573857 HOXA10P31260 410 aaPredicted RBP18.73■□□□□ 0.59
TVP23A-208ENST00000573857 PARP10Q53GL7 1025 aa18.73■□□□□ 0.59
TVP23A-208ENST00000573857 JMYQ8N9B5 988 aa18.73■□□□□ 0.59
TVP23A-208ENST00000573857 RPGRQ92834 1020 aaKnown RBP18.73■□□□□ 0.59
TVP23A-208ENST00000573857 RUNDC1Q96C34 613 aa18.73■□□□□ 0.59
TVP23A-208ENST00000573857 L3MBTL3Q96JM7 780 aaPredicted RBP18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms