RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 NPHP1O15259 732 aa26.82■■□□□ 1.88
CHMP6-204ENST00000572778 GRIN3BO60391 1043 aa26.82■■□□□ 1.88
CHMP6-204ENST00000572778 ERVV-1B6SEH8 477 aa26.81■■□□□ 1.88
CHMP6-204ENST00000572778 RGL2O15211 777 aa26.81■■□□□ 1.88
CHMP6-204ENST00000572778 ZBTB3Q9H5J0 574 aa26.81■■□□□ 1.88
CHMP6-204ENST00000572778 NIP7Q9Y221 180 aaKnown RBP eCLIP26.81■■□□□ 1.88
CHMP6-204ENST00000572778 MAP3K15Q6ZN16 1313 aa26.81■■□□□ 1.88
CHMP6-204ENST00000572778 CHRNA5P30532 468 aa26.8■■□□□ 1.88
CHMP6-204ENST00000572778 CCDC24Q8N4L8 307 aa26.8■■□□□ 1.88
CHMP6-204ENST00000572778 TSR2Q969E8 191 aaKnown RBP26.8■■□□□ 1.88
CHMP6-204ENST00000572778 DDX21Q9NR30 783 aaKnown RBP eCLIP26.8■■□□□ 1.88
CHMP6-204ENST00000572778 YY1P25490 414 aa26.79■■□□□ 1.88
CHMP6-204ENST00000572778 AIMP1Q12904 312 aaKnown RBP26.79■■□□□ 1.88
CHMP6-204ENST00000572778 PRR5LQ6MZQ0 368 aa26.79■■□□□ 1.88
CHMP6-204ENST00000572778 LRP10Q7Z4F1 713 aa26.79■■□□□ 1.88
CHMP6-204ENST00000572778 CHPF2Q9P2E5 772 aa26.79■■□□□ 1.88
CHMP6-204ENST00000572778 KCNA3P22001 575 aa26.78■■□□□ 1.88
CHMP6-204ENST00000572778 NBPF5PQ86XG9 351 aaPredicted RBP26.78■■□□□ 1.88
CHMP6-204ENST00000572778 CNBD1Q8NA66 436 aa26.78■■□□□ 1.88
CHMP6-204ENST00000572778 C8orf58Q8NAV2 365 aa26.78■■□□□ 1.88
CHMP6-204ENST00000572778 BCS1LQ9Y276 419 aa26.78■■□□□ 1.88
CHMP6-204ENST00000572778 BCORQ6W2J9 1755 aa26.78■■□□□ 1.88
CHMP6-204ENST00000572778 KIF13BQ9NQT8 1826 aa26.78■■□□□ 1.88
CHMP6-204ENST00000572778 IL16Q14005 1332 aa26.77■■□□□ 1.88
CHMP6-204ENST00000572778 FAM177BA6PVY3 158 aa26.77■■□□□ 1.88
CHMP6-204ENST00000572778 CCER2I3L3R5 266 aa26.77■■□□□ 1.88
CHMP6-204ENST00000572778 DIEXFQ68CQ4 756 aaKnown RBP26.77■■□□□ 1.88
CHMP6-204ENST00000572778 COPS6Q7L5N1 327 aa26.77■■□□□ 1.88
CHMP6-204ENST00000572778 XAGE3Q8WTP9 111 aa26.77■■□□□ 1.88
CHMP6-204ENST00000572778 PIM2Q9P1W9 311 aa26.77■■□□□ 1.88
CHMP6-204ENST00000572778 ST5P78524 1137 aa26.76■■□□□ 1.87
CHMP6-204ENST00000572778 WDR63Q8IWG1 891 aa26.76■■□□□ 1.87
CHMP6-204ENST00000572778 DBF4Q9UBU7 674 aaPredicted RBP26.76■■□□□ 1.87
CHMP6-204ENST00000572778 NRXN2Q9P2S2 1712 aa26.75■■□□□ 1.87
CHMP6-204ENST00000572778 C2CD5Q86YS7 1000 aa26.74■■□□□ 1.87
CHMP6-204ENST00000572778 BRIP1Q9BX63 1249 aa26.74■■□□□ 1.87
CHMP6-204ENST00000572778 AFDNP55196 1824 aaKnown RBP26.74■■□□□ 1.87
CHMP6-204ENST00000572778 N4BP2Q86UW6 1770 aaPredicted RBP26.74■■□□□ 1.87
CHMP6-204ENST00000572778 H0YIN7 160 aa26.73■■□□□ 1.87
CHMP6-204ENST00000572778 GPTP24298 496 aa26.73■■□□□ 1.87
CHMP6-204ENST00000572778 TPTE2Q6XPS3 522 aa26.73■■□□□ 1.87
CHMP6-204ENST00000572778 GIGYF2Q6Y7W6 1299 aaKnown RBP26.73■■□□□ 1.87
CHMP6-204ENST00000572778 UTRNP46939 3433 aa26.73■■□□□ 1.87
CHMP6-204ENST00000572778 KIAA1551Q9HCM1 1747 aa26.73■■□□□ 1.87
CHMP6-204ENST00000572778 PDE6BP35913 854 aa26.72■■□□□ 1.87
CHMP6-204ENST00000572778 DALRD3Q5D0E6 543 aaKnown RBP26.72■■□□□ 1.87
CHMP6-204ENST00000572778 TSPYL6Q8N831 410 aa26.72■■□□□ 1.87
CHMP6-204ENST00000572778 GTF2E1P29083 439 aaPredicted RBP26.71■■□□□ 1.87
CHMP6-204ENST00000572778 HYPKQ9NX55 129 aa26.71■■□□□ 1.87
CHMP6-204ENST00000572778 CHMP4AQ9BY43 222 aa26.7■■□□□ 1.86
CHMP6-204ENST00000572778 GOLGB1Q14789 3259 aaKnown RBP26.7■■□□□ 1.86
CHMP6-204ENST00000572778 ATP10DQ9P241 1426 aa26.7■■□□□ 1.86
CHMP6-204ENST00000572778 ZNF34Q8IZ26 560 aa26.69■■□□□ 1.86
CHMP6-204ENST00000572778 FANCIQ9NVI1 1328 aa26.68■■□□□ 1.86
CHMP6-204ENST00000572778 CCDC30Q5VVM6 783 aa26.68■■□□□ 1.86
CHMP6-204ENST00000572778 NYXQ9GZU5 481 aa26.68■■□□□ 1.86
CHMP6-204ENST00000572778 PDZRN3Q9UPQ7 1066 aa26.68■■□□□ 1.86
CHMP6-204ENST00000572778 TWISTNBQ3B726 338 aaPredicted RBP26.67■■□□□ 1.86
CHMP6-204ENST00000572778 ZNF622Q969S3 477 aaKnown RBP eCLIP26.67■■□□□ 1.86
CHMP6-204ENST00000572778 UBN2Q6ZU65 1347 aa26.66■■□□□ 1.86
CHMP6-204ENST00000572778 GOLGA2Q08379 1002 aa26.66■■□□□ 1.86
CHMP6-204ENST00000572778 HSP90AB3PQ58FF7 597 aa26.66■■□□□ 1.86
CHMP6-204ENST00000572778 SUSD4Q5VX71 490 aa26.66■■□□□ 1.86
CHMP6-204ENST00000572778 ANKRD13DQ6ZTN6 518 aa26.66■■□□□ 1.86
CHMP6-204ENST00000572778 ARHGAP27Q6ZUM4 889 aa26.66■■□□□ 1.86
CHMP6-204ENST00000572778 MIER1Q8N108 512 aa26.66■■□□□ 1.86
CHMP6-204ENST00000572778 SPINK5Q9NQ38 1064 aaPredicted RBP26.66■■□□□ 1.86
CHMP6-204ENST00000572778 NUTM1Q86Y26 1132 aa26.65■■□□□ 1.86
CHMP6-204ENST00000572778 TTLL6Q8N841 843 aa26.65■■□□□ 1.86
CHMP6-204ENST00000572778 PLBD2Q8NHP8 589 aa26.65■■□□□ 1.86
CHMP6-204ENST00000572778 PHAXQ9H814 394 aaKnown RBP26.65■■□□□ 1.86
CHMP6-204ENST00000572778 PARP10Q53GL7 1025 aa26.64■■□□□ 1.86
CHMP6-204ENST00000572778 MYH16Q9H6N6 1097 aa26.64■■□□□ 1.86
CHMP6-204ENST00000572778 TCERG1O14776 1098 aaKnown RBP26.63■■□□□ 1.85
CHMP6-204ENST00000572778 EXOSC9Q06265 439 aaKnown RBP26.63■■□□□ 1.85
CHMP6-204ENST00000572778 TCIRG1Q13488 830 aa26.63■■□□□ 1.85
CHMP6-204ENST00000572778 ERFEQ4G0M1 354 aa26.63■■□□□ 1.85
CHMP6-204ENST00000572778 PPP1R42Q7Z4L9 355 aa26.63■■□□□ 1.85
CHMP6-204ENST00000572778 STK31Q9BXU1 1019 aa26.62■■□□□ 1.85
CHMP6-204ENST00000572778 RIC3Q7Z5B4 369 aa26.61■■□□□ 1.85
CHMP6-204ENST00000572778 NUP98P52948 1817 aa26.6■■□□□ 1.85
CHMP6-204ENST00000572778 NTSR2O95665 410 aa26.6■■□□□ 1.85
CHMP6-204ENST00000572778 SRGNP10124 158 aa26.6■■□□□ 1.85
CHMP6-204ENST00000572778 MASTLQ96GX5 879 aa26.6■■□□□ 1.85
CHMP6-204ENST00000572778 UTP14AQ9BVJ6 771 aaKnown RBP26.6■■□□□ 1.85
CHMP6-204ENST00000572778 ZNF521Q96K83 1311 aa26.6■■□□□ 1.85
CHMP6-204ENST00000572778 IBTKQ9P2D0 1353 aaPredicted RBP26.59■■□□□ 1.85
CHMP6-204ENST00000572778 STYK1Q6J9G0 422 aa26.59■■□□□ 1.85
CHMP6-204ENST00000572778 NLRP10Q86W26 655 aa26.59■■□□□ 1.85
CHMP6-204ENST00000572778 ANKRD31Q8N7Z5 1873 aa26.59■■□□□ 1.85
CHMP6-204ENST00000572778 ABCC12Q96J65 1359 aa26.58■■□□□ 1.85
CHMP6-204ENST00000572778 KLRG2A4D1S0 409 aaPredicted RBP26.58■■□□□ 1.85
CHMP6-204ENST00000572778 CNKSR1Q969H4 720 aa26.58■■□□□ 1.85
CHMP6-204ENST00000572778 NPR1P16066 1061 aa26.57■■□□□ 1.84
CHMP6-204ENST00000572778 ZNF428Q96B54 188 aa26.57■■□□□ 1.84
CHMP6-204ENST00000572778 ZNF219Q9P2Y4 722 aaPredicted RBP26.57■■□□□ 1.84
CHMP6-204ENST00000572778 BRCA1P38398 1863 aaKnown RBP26.57■■□□□ 1.84
CHMP6-204ENST00000572778 ATP5J2-PTCD1G3V325 749 aa26.56■■□□□ 1.84
CHMP6-204ENST00000572778 VAMP4O75379 141 aa26.56■■□□□ 1.84
CHMP6-204ENST00000572778 DDX58O95786 925 aaKnown RBP26.56■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms