RNA–Protein interactions for RNA: ENST00000572176.1

ATP2A3-211, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

TSL 2

Gene ATP2A3, Length 428 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-211ENST00000572176 CCDC88AQ3V6T2 1871 aa17.07■□□□□ 0.32
ATP2A3-211ENST00000572176 NFE2L2Q16236 605 aa17.06■□□□□ 0.32
ATP2A3-211ENST00000572176 PNISRQ8TF01 805 aaKnown RBP17.06■□□□□ 0.32
ATP2A3-211ENST00000572176 ZNF622Q969S3 477 aaKnown RBP eCLIP17.06■□□□□ 0.32
ATP2A3-211ENST00000572176 MIS18AQ9NYP9 233 aa17.06■□□□□ 0.32
ATP2A3-211ENST00000572176 CACNA1SQ13698 1873 aa17.05■□□□□ 0.32
ATP2A3-211ENST00000572176 APLP1P51693 650 aa17.05■□□□□ 0.32
ATP2A3-211ENST00000572176 SLX4Q8IY92 1834 aa17.05■□□□□ 0.32
ATP2A3-211ENST00000572176 WDR90Q96KV7 1748 aa17.04■□□□□ 0.32
ATP2A3-211ENST00000572176 DICER1Q9UPY3 1922 aaKnown RBP17.04■□□□□ 0.32
ATP2A3-211ENST00000572176 NPHP1O15259 732 aa17.04■□□□□ 0.32
ATP2A3-211ENST00000572176 SRGNP10124 158 aa17.04■□□□□ 0.32
ATP2A3-211ENST00000572176 STYK1Q6J9G0 422 aa17.04■□□□□ 0.32
ATP2A3-211ENST00000572176 NBPF5PQ86XG9 351 aaPredicted RBP17.04■□□□□ 0.32
ATP2A3-211ENST00000572176 C16orf71Q8IYS4 520 aaPredicted RBP17.04■□□□□ 0.32
ATP2A3-211ENST00000572176 RRAGCQ9HB90 399 aa17.04■□□□□ 0.32
ATP2A3-211ENST00000572176 MAPK8IP3Q9UPT6 1336 aa17.03■□□□□ 0.32
ATP2A3-211ENST00000572176 GLTPD2A6NH11 291 aa17.03■□□□□ 0.32
ATP2A3-211ENST00000572176 C21orf2O43822 256 aa17.03■□□□□ 0.32
ATP2A3-211ENST00000572176 EIF4A1P60842 406 aaKnown RBP17.03■□□□□ 0.32
ATP2A3-211ENST00000572176 CNKSR1Q969H4 720 aa17.03■□□□□ 0.32
ATP2A3-211ENST00000572176 THUMPD2Q9BTF0 503 aaKnown RBP17.03■□□□□ 0.32
ATP2A3-211ENST00000572176 PNNQ9H307 717 aaKnown RBP17.03■□□□□ 0.32
ATP2A3-211ENST00000572176 LTBP3Q9NS15 1303 aa17.02■□□□□ 0.32
ATP2A3-211ENST00000572176 FSTL1Q12841 308 aa17.02■□□□□ 0.32
ATP2A3-211ENST00000572176 RALBP1Q15311 655 aa17.02■□□□□ 0.32
ATP2A3-211ENST00000572176 PRPF40BQ6NWY9 871 aaKnown RBP17.02■□□□□ 0.32
ATP2A3-211ENST00000572176 MASTLQ96GX5 879 aa17.02■□□□□ 0.32
ATP2A3-211ENST00000572176 NIP7Q9Y221 180 aaKnown RBP eCLIP17.02■□□□□ 0.32
ATP2A3-211ENST00000572176 KLRG2A4D1S0 409 aaPredicted RBP17.01■□□□□ 0.31
ATP2A3-211ENST00000572176 HLFQ16534 295 aa17.01■□□□□ 0.31
ATP2A3-211ENST00000572176 ZNF219Q9P2Y4 722 aaPredicted RBP17.01■□□□□ 0.31
ATP2A3-211ENST00000572176 TAOK3Q9H2K8 898 aa17■□□□□ 0.31
ATP2A3-211ENST00000572176 NUP98P52948 1817 aa17■□□□□ 0.31
ATP2A3-211ENST00000572176 SOGA3Q5TF21 947 aa16.99■□□□□ 0.31
ATP2A3-211ENST00000572176 TPTE2Q6XPS3 522 aa16.99■□□□□ 0.31
ATP2A3-211ENST00000572176 ERVV-1B6SEH8 477 aa16.98■□□□□ 0.31
ATP2A3-211ENST00000572176 NPR1P16066 1061 aa16.98■□□□□ 0.31
ATP2A3-211ENST00000572176 DNAJC5GQ8N7S2 189 aa16.98■□□□□ 0.31
ATP2A3-211ENST00000572176 SMC1BQ8NDV3 1235 aa16.98■□□□□ 0.31
ATP2A3-211ENST00000572176 C7orf43Q8WVR3 580 aa16.98■□□□□ 0.31
ATP2A3-211ENST00000572176 ERBB4Q15303 1308 aa16.97■□□□□ 0.31
ATP2A3-211ENST00000572176 MAP3K15Q6ZN16 1313 aa16.97■□□□□ 0.31
ATP2A3-211ENST00000572176 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
ATP2A3-211ENST00000572176 ERFEQ4G0M1 354 aa16.97■□□□□ 0.31
ATP2A3-211ENST00000572176 ABCC12Q96J65 1359 aa16.97■□□□□ 0.31
ATP2A3-211ENST00000572176 IBTKQ9P2D0 1353 aaPredicted RBP16.97■□□□□ 0.31
ATP2A3-211ENST00000572176 MYBBP1AQ9BQG0 1328 aaKnown RBP16.96■□□□□ 0.31
ATP2A3-211ENST00000572176 RIC1Q4ADV7 1423 aa16.96■□□□□ 0.31
ATP2A3-211ENST00000572176 TTLL7Q6ZT98 887 aa16.96■□□□□ 0.31
ATP2A3-211ENST00000572176 TSPYL4Q9UJ04 414 aa16.96■□□□□ 0.31
ATP2A3-211ENST00000572176 FAM177BA6PVY3 158 aa16.95■□□□□ 0.3
ATP2A3-211ENST00000572176 POTECB2RU33 542 aa16.95■□□□□ 0.3
ATP2A3-211ENST00000572176 RIPK4P57078 832 aa16.95■□□□□ 0.3
ATP2A3-211ENST00000572176 CCDC93Q567U6 631 aa16.95■□□□□ 0.3
ATP2A3-211ENST00000572176 DPY19L2Q6NUT2 758 aa16.95■□□□□ 0.3
ATP2A3-211ENST00000572176 KIF6Q6ZMV9 814 aa16.95■□□□□ 0.3
ATP2A3-211ENST00000572176 NGEFQ8N5V2 710 aa16.95■□□□□ 0.3
ATP2A3-211ENST00000572176 RRP7AQ9Y3A4 280 aaKnown RBP16.95■□□□□ 0.3
ATP2A3-211ENST00000572176 MYL6BP14649 208 aa16.94■□□□□ 0.3
ATP2A3-211ENST00000572176 TMPOP42166 694 aaKnown RBP16.94■□□□□ 0.3
ATP2A3-211ENST00000572176 DDX10Q13206 875 aaKnown RBP16.94■□□□□ 0.3
ATP2A3-211ENST00000572176 NYXQ9GZU5 481 aa16.94■□□□□ 0.3
ATP2A3-211ENST00000572176 BABAM1Q9NWV8 329 aa16.94■□□□□ 0.3
ATP2A3-211ENST00000572176 SNED1Q8TER0 1413 aa16.94■□□□□ 0.3
ATP2A3-211ENST00000572176 UBN2Q6ZU65 1347 aa16.94■□□□□ 0.3
ATP2A3-211ENST00000572176 HTRA3P83110 453 aa16.93■□□□□ 0.3
ATP2A3-211ENST00000572176 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
ATP2A3-211ENST00000572176 CRY2Q49AN0 593 aa16.93■□□□□ 0.3
ATP2A3-211ENST00000572176 LRP10Q7Z4F1 713 aa16.93■□□□□ 0.3
ATP2A3-211ENST00000572176 GTF2E1P29083 439 aaPredicted RBP16.92■□□□□ 0.3
ATP2A3-211ENST00000572176 FKBP4Q02790 459 aaKnown RBP eCLIP16.92■□□□□ 0.3
ATP2A3-211ENST00000572176 NUTM1Q86Y26 1132 aa16.92■□□□□ 0.3
ATP2A3-211ENST00000572176 ZBTB3Q9H5J0 574 aa16.92■□□□□ 0.3
ATP2A3-211ENST00000572176 GPTP24298 496 aa16.91■□□□□ 0.3
ATP2A3-211ENST00000572176 ALDH1B1P30837 517 aa16.91■□□□□ 0.3
ATP2A3-211ENST00000572176 PDIA6Q15084 440 aa16.91■□□□□ 0.3
ATP2A3-211ENST00000572176 OLFM4Q6UX06 510 aa16.91■□□□□ 0.3
ATP2A3-211ENST00000572176 ZNF34Q8IZ26 560 aa16.91■□□□□ 0.3
ATP2A3-211ENST00000572176 KLRG1Q96E93 195 aa16.91■□□□□ 0.3
ATP2A3-211ENST00000572176 NTSR2O95665 410 aa16.9■□□□□ 0.3
ATP2A3-211ENST00000572176 GIGYF2Q6Y7W6 1299 aaKnown RBP16.9■□□□□ 0.3
ATP2A3-211ENST00000572176 ANKRD36CQ5JPF3 1778 aa16.89■□□□□ 0.3
ATP2A3-211ENST00000572176 DDNO94850 711 aaPredicted RBP16.89■□□□□ 0.29
ATP2A3-211ENST00000572176 PROSER3Q2NL68 480 aa16.89■□□□□ 0.29
ATP2A3-211ENST00000572176 SUSD4Q5VX71 490 aa16.89■□□□□ 0.29
ATP2A3-211ENST00000572176 CCDC146Q8IYE0 955 aa16.89■□□□□ 0.29
ATP2A3-211ENST00000572176 RTKN2Q8IZC4 609 aa16.89■□□□□ 0.29
ATP2A3-211ENST00000572176 SCN4AP35499 1836 aa16.89■□□□□ 0.29
ATP2A3-211ENST00000572176 EIF2S2P20042 333 aaKnown RBP16.88■□□□□ 0.29
ATP2A3-211ENST00000572176 IFFO2Q5TF58 517 aa16.88■□□□□ 0.29
ATP2A3-211ENST00000572176 JMYQ8N9B5 988 aa16.88■□□□□ 0.29
ATP2A3-211ENST00000572176 L3MBTL3Q96JM7 780 aaPredicted RBP16.88■□□□□ 0.29
ATP2A3-211ENST00000572176 ZNF277Q9NRM2 450 aaPredicted RBP16.88■□□□□ 0.29
ATP2A3-211ENST00000572176 ANXA1P04083 346 aa16.87■□□□□ 0.29
ATP2A3-211ENST00000572176 HOXA10P31260 410 aaPredicted RBP16.87■□□□□ 0.29
ATP2A3-211ENST00000572176 PARP10Q53GL7 1025 aa16.87■□□□□ 0.29
ATP2A3-211ENST00000572176 RUNDC1Q96C34 613 aa16.87■□□□□ 0.29
ATP2A3-211ENST00000572176 ZNF541Q9H0D2 1346 aa16.87■□□□□ 0.29
ATP2A3-211ENST00000572176 CHL1O00533 1208 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms