RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 PDE4DIPQ5VU43 2346 aa10.02□□□□□ -0.8
SMG6-205ENST00000570659 HSP90AB1P08238 724 aaKnown RBP10.02□□□□□ -0.81
SMG6-205ENST00000570659 SRGNP10124 158 aa10.02□□□□□ -0.81
SMG6-205ENST00000570659 GRM1Q13255 1194 aa10.02□□□□□ -0.81
SMG6-205ENST00000570659 SULT6B1Q6IMI4 303 aa10.02□□□□□ -0.81
SMG6-205ENST00000570659 DLK2Q6UY11 383 aa10.02□□□□□ -0.81
SMG6-205ENST00000570659 MCOLN1Q9GZU1 580 aa10.02□□□□□ -0.81
SMG6-205ENST00000570659 RNMTO43148 476 aaKnown RBP10.01□□□□□ -0.81
SMG6-205ENST00000570659 KCNQ3O43525 872 aa10.01□□□□□ -0.81
SMG6-205ENST00000570659 EPHX2P34913 555 aa10.01□□□□□ -0.81
SMG6-205ENST00000570659 CAPNS2Q96L46 248 aa10.01□□□□□ -0.81
SMG6-205ENST00000570659 BRIP1Q9BX63 1249 aa10.01□□□□□ -0.81
SMG6-205ENST00000570659 SIPA1L3O60292 1781 aaPredicted RBP10.01□□□□□ -0.81
SMG6-205ENST00000570659 PRAMEF22A3QJZ6 481 aa10□□□□□ -0.81
SMG6-205ENST00000570659 CAMTA2O94983 1202 aa10□□□□□ -0.81
SMG6-205ENST00000570659 IL13P35225 146 aa10□□□□□ -0.81
SMG6-205ENST00000570659 DDX21Q9NR30 783 aaKnown RBP eCLIP10□□□□□ -0.81
SMG6-205ENST00000570659 CLEC11AQ9Y240 323 aa10□□□□□ -0.81
SMG6-205ENST00000570659 A1BGP04217 495 aa9.99□□□□□ -0.81
SMG6-205ENST00000570659 EPS15P42566 896 aa9.99□□□□□ -0.81
SMG6-205ENST00000570659 AMOTQ4VCS5 1084 aa9.99□□□□□ -0.81
SMG6-205ENST00000570659 C1orf141Q5JVX7 400 aa9.99□□□□□ -0.81
SMG6-205ENST00000570659 ZNF496Q96IT1 587 aaPredicted RBP9.99□□□□□ -0.81
SMG6-205ENST00000570659 HACL1Q9UJ83 578 aa9.99□□□□□ -0.81
SMG6-205ENST00000570659 ABT1Q9ULW3 272 aaKnown RBP9.99□□□□□ -0.81
SMG6-205ENST00000570659 TRPM7Q96QT4 1865 aa9.99□□□□□ -0.81
SMG6-205ENST00000570659 FZD9O00144 591 aa9.98□□□□□ -0.81
SMG6-205ENST00000570659 HMOX1P09601 288 aa9.98□□□□□ -0.81
SMG6-205ENST00000570659 SCNN1DP51172 638 aa9.98□□□□□ -0.81
SMG6-205ENST00000570659 SOX10P56693 466 aa9.98□□□□□ -0.81
SMG6-205ENST00000570659 MTHFSDQ2M296 383 aaKnown RBP9.98□□□□□ -0.81
SMG6-205ENST00000570659 STYK1Q6J9G0 422 aa9.98□□□□□ -0.81
SMG6-205ENST00000570659 CFAP44Q96MT7 982 aa9.98□□□□□ -0.81
SMG6-205ENST00000570659 IQCA1LA6NCM1 817 aa9.97□□□□□ -0.81
SMG6-205ENST00000570659 PDE6BP35913 854 aa9.97□□□□□ -0.81
SMG6-205ENST00000570659 GPR101Q96P66 508 aaPredicted RBP9.97□□□□□ -0.81
SMG6-205ENST00000570659 ZNF330Q9Y3S2 320 aaPredicted RBP9.97□□□□□ -0.81
SMG6-205ENST00000570659 SHTN1A0MZ66 631 aa9.96□□□□□ -0.82
SMG6-205ENST00000570659 MAP2K1Q02750 393 aaPredicted RBP9.96□□□□□ -0.82
SMG6-205ENST00000570659 FKBP4Q02790 459 aaKnown RBP eCLIP9.96□□□□□ -0.82
SMG6-205ENST00000570659 AKAP4Q5JQC9 854 aa9.96□□□□□ -0.82
SMG6-205ENST00000570659 PAXIP1Q6ZW49 1069 aaPredicted RBP9.96□□□□□ -0.82
SMG6-205ENST00000570659 CNBD1Q8NA66 436 aa9.96□□□□□ -0.82
SMG6-205ENST00000570659 KLRG2A4D1S0 409 aaPredicted RBP9.95□□□□□ -0.82
SMG6-205ENST00000570659 SYNE4Q8N205 404 aa9.95□□□□□ -0.82
SMG6-205ENST00000570659 IL17REQ8NFR9 667 aa9.95□□□□□ -0.82
SMG6-205ENST00000570659 CNKSR1Q969H4 720 aa9.95□□□□□ -0.82
SMG6-205ENST00000570659 MASTLQ96GX5 879 aa9.95□□□□□ -0.82
SMG6-205ENST00000570659 POLR3GLQ9BT43 218 aa9.95□□□□□ -0.82
SMG6-205ENST00000570659 TLL2Q9Y6L7 1015 aa9.95□□□□□ -0.82
SMG6-205ENST00000570659 ABCC12Q96J65 1359 aa9.95□□□□□ -0.82
SMG6-205ENST00000570659 HEG1Q9ULI3 1381 aa9.95□□□□□ -0.82
SMG6-205ENST00000570659 IARSP41252 1262 aaKnown RBP9.94□□□□□ -0.82
SMG6-205ENST00000570659 DGKZQ13574 1117 aa9.94□□□□□ -0.82
SMG6-205ENST00000570659 CCDC93Q567U6 631 aa9.94□□□□□ -0.82
SMG6-205ENST00000570659 CIAPIN1Q6FI81 312 aa9.94□□□□□ -0.82
SMG6-205ENST00000570659 C3orf67Q6ZVT6 689 aa9.94□□□□□ -0.82
SMG6-205ENST00000570659 GJA3Q9Y6H8 435 aa9.94□□□□□ -0.82
SMG6-205ENST00000570659 FAM177BA6PVY3 158 aa9.93□□□□□ -0.82
SMG6-205ENST00000570659 VSIG10Q8N0Z9 540 aa9.93□□□□□ -0.82
SMG6-205ENST00000570659 GLIS2Q9BZE0 524 aaPredicted RBP9.93□□□□□ -0.82
SMG6-205ENST00000570659 PANK3Q9H999 370 aa9.93□□□□□ -0.82
SMG6-205ENST00000570659 USP16Q9Y5T5 823 aa9.93□□□□□ -0.82
SMG6-205ENST00000570659 NBPF26B4DH59 902 aa9.92□□□□□ -0.82
SMG6-205ENST00000570659 HIRAP54198 1017 aaPredicted RBP9.92□□□□□ -0.82
SMG6-205ENST00000570659 HLFQ16534 295 aa9.92□□□□□ -0.82
SMG6-205ENST00000570659 NBPF10Q6P3W6 841 aaKnown RBP9.92□□□□□ -0.82
SMG6-205ENST00000570659 SAPCD2Q86UD0 394 aa9.92□□□□□ -0.82
SMG6-205ENST00000570659 GPC2Q8N158 579 aa9.92□□□□□ -0.82
SMG6-205ENST00000570659 NBPF15Q8N660 670 aa9.92□□□□□ -0.82
SMG6-205ENST00000570659 IL6STP40189 918 aaPredicted RBP9.91□□□□□ -0.82
SMG6-205ENST00000570659 SETDB2Q96T68 719 aa9.91□□□□□ -0.82
SMG6-205ENST00000570659 COL3A1P02461 1466 aaPredicted RBP9.91□□□□□ -0.82
SMG6-205ENST00000570659 COL4A1P02462 1669 aa9.9□□□□□ -0.82
SMG6-205ENST00000570659 NPR1P16066 1061 aa9.9□□□□□ -0.82
SMG6-205ENST00000570659 ZNF790Q6PG37 636 aa9.9□□□□□ -0.82
SMG6-205ENST00000570659 PNMA8AQ86V59 439 aaPredicted RBP9.9□□□□□ -0.82
SMG6-205ENST00000570659 DZIP3Q86Y13 1208 aaKnown RBP9.9□□□□□ -0.82
SMG6-205ENST00000570659 TRPM4Q8TD43 1214 aa9.9□□□□□ -0.82
SMG6-205ENST00000570659 A0A087WZG4 1122 aa9.89□□□□□ -0.83
SMG6-205ENST00000570659 FAM155AB1AL88 458 aaPredicted RBP9.89□□□□□ -0.83
SMG6-205ENST00000570659 TCERG1O14776 1098 aaKnown RBP9.89□□□□□ -0.83
SMG6-205ENST00000570659 CELF2O95319 508 aaKnown RBP9.89□□□□□ -0.83
SMG6-205ENST00000570659 ST5P78524 1137 aa9.89□□□□□ -0.83
SMG6-205ENST00000570659 NBPF5PQ86XG9 351 aaPredicted RBP9.89□□□□□ -0.83
SMG6-205ENST00000570659 NUTM1Q86Y26 1132 aa9.89□□□□□ -0.83
SMG6-205ENST00000570659 TAF1P21675 1872 aa9.88□□□□□ -0.83
SMG6-205ENST00000570659 STARD3NLO95772 234 aa9.88□□□□□ -0.83
SMG6-205ENST00000570659 EGFRP00533 1210 aa9.88□□□□□ -0.83
SMG6-205ENST00000570659 MAP2K2P36507 400 aa9.88□□□□□ -0.83
SMG6-205ENST00000570659 CDCA8Q53HL2 280 aa9.88□□□□□ -0.83
SMG6-205ENST00000570659 MORC1Q86VD1 984 aa9.88□□□□□ -0.83
SMG6-205ENST00000570659 PDZRN3Q9UPQ7 1066 aa9.88□□□□□ -0.83
SMG6-205ENST00000570659 MKI67P46013 3256 aaKnown RBP9.87□□□□□ -0.83
SMG6-205ENST00000570659 SLC24A1O60721 1099 aa9.87□□□□□ -0.83
SMG6-205ENST00000570659 ECE1P42892 770 aa9.87□□□□□ -0.83
SMG6-205ENST00000570659 AMER1Q5JTC6 1135 aaPredicted RBP9.87□□□□□ -0.83
SMG6-205ENST00000570659 SOGA3Q5TF21 947 aa9.87□□□□□ -0.83
SMG6-205ENST00000570659 PHACTR3Q96KR7 559 aa9.87□□□□□ -0.83
SMG6-205ENST00000570659 ZNF408Q9H9D4 720 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms